BLASTX nr result

ID: Catharanthus22_contig00033774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00033774
         (309 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    59   5e-07
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 57   3e-06

>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
 Frame = -1

Query: 261 MTLSGKIEKEWILDS-SSHHMTDKRDFLSKLRPSPPYTIILLNGSKTIR*TLDSIYLHSK 85
           +T   KI +EWILDS +S HMT +RD    LR      + L +G+KT+   +  + L   
Sbjct: 250 LTGKNKIVEEWILDSGASMHMTGRRDLFDWLRKWETACVGLPDGTKTVANEMGYVKLSKD 309

Query: 84  LNIDNVLFIPELRCNLLSFSAFQSE 10
           L + NVL++P L+CNL+S      E
Sbjct: 310 LCLKNVLYVPSLKCNLISIGQLLKE 334


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 29/78 (37%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = -1

Query: 231 WILDS-SSHHMTDKRDFLSKLRPSPPYTIILLNGSKTIR*TLDSIYLHSKLNIDNVLFIP 55
           WI+D+ +SHHM+      + L   PPY + L NGS TI  +++ + L  K+ + +VL++P
Sbjct: 334 WIVDTGASHHMSGDAQLFNDLCDVPPYLVSLPNGSTTIA-SMEIVILTDKMKLHHVLYVP 392

Query: 54  ELRCNLLSFSAFQSE*LC 1
           +L+CNL+  S    E  C
Sbjct: 393 QLKCNLIVVSKLTIENNC 410


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