BLASTX nr result
ID: Catharanthus22_contig00033735
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00033735
(466 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 124 1e-26
ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 117 1e-24
ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 116 3e-24
ref|XP_006480137.1| PREDICTED: armadillo repeat-containing prote... 111 1e-22
ref|XP_006423067.1| hypothetical protein CICLE_v10029827mg, part... 111 1e-22
ref|XP_006384443.1| hypothetical protein POPTR_0004s15130g [Popu... 109 3e-22
ref|XP_006384442.1| hypothetical protein POPTR_0004s15130g [Popu... 109 3e-22
ref|XP_002330318.1| predicted protein [Populus trichocarpa] 109 3e-22
ref|NP_567943.1| RING/U-box domain-containing protein [Arabidops... 106 3e-21
dbj|BAC43725.1| unknown protein [Arabidopsis thaliana] 106 3e-21
emb|CAA19876.1| putative protein [Arabidopsis thaliana] gi|72703... 106 3e-21
gb|AAM62531.1| unknown [Arabidopsis thaliana] 106 3e-21
ref|XP_002521847.1| Armadillo repeat-containing protein, putativ... 104 1e-20
ref|XP_002869184.1| hypothetical protein ARALYDRAFT_328350 [Arab... 102 4e-20
gb|EOX98193.1| RING/U-box superfamily protein, putative [Theobro... 101 9e-20
ref|XP_006412296.1| hypothetical protein EUTSA_v10026077mg [Eutr... 100 3e-19
ref|XP_006412295.1| hypothetical protein EUTSA_v10026077mg [Eutr... 100 3e-19
ref|XP_006349363.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 98 1e-18
ref|XP_006349362.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 98 1e-18
ref|XP_006349361.1| PREDICTED: E3 ubiquitin-protein ligase RNF17... 98 1e-18
>ref|XP_006349360.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like [Solanum
tuberosum]
Length = 226
Score = 124 bits (312), Expect = 1e-26
Identities = 51/82 (62%), Positives = 58/82 (70%)
Frame = -3
Query: 248 MARSAELKMKKYDGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKC 69
M +K ++ + PP DD CPICFG F PC+TNCGHWFC SCIL LW YR R+CKC
Sbjct: 20 MEEEGSVKRRESEKPPEDDCCPICFGNFSIPCKTNCGHWFCASCILQLWYYRSTLRRCKC 79
Query: 68 PICCSPINKLVPEPSLFLQQEE 3
PICC I+KLVPE SL QQEE
Sbjct: 80 PICCCLISKLVPEASLLAQQEE 101
>ref|XP_004230477.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 1
[Solanum lycopersicum]
Length = 227
Score = 117 bits (294), Expect = 1e-24
Identities = 50/92 (54%), Positives = 63/92 (68%), Gaps = 9/92 (9%)
Frame = -3
Query: 251 SMARSAELKMKKYDG---------PPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWS 99
S + ++KM++ +G PP DD CPICFG+F PC+TNCGHWFC +CIL LW
Sbjct: 11 SSIKDGDVKMEEEEGVKRRRESEKPPGDDCCPICFGDFSIPCKTNCGHWFCANCILQLWY 70
Query: 98 YRGAFRQCKCPICCSPINKLVPEPSLFLQQEE 3
YR R+CKCPIC I+KLVPE SL +QQE+
Sbjct: 71 YRSTLRRCKCPICSCLISKLVPEASLLVQQEK 102
>ref|XP_004230478.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform 2
[Solanum lycopersicum]
Length = 208
Score = 116 bits (291), Expect = 3e-24
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -3
Query: 227 KMKKYDGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPI 48
+ ++ + PP DD CPICFG+F PC+TNCGHWFC +CIL LW YR R+CKCPIC I
Sbjct: 9 RRRESEKPPGDDCCPICFGDFSIPCKTNCGHWFCANCILQLWYYRSTLRRCKCPICSCLI 68
Query: 47 NKLVPEPSLFLQQEE 3
+KLVPE SL +QQE+
Sbjct: 69 SKLVPEASLLVQQEK 83
>ref|XP_006480137.1| PREDICTED: armadillo repeat-containing protein 6-like [Citrus
sinensis]
Length = 669
Score = 111 bits (277), Expect = 1e-22
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = -3
Query: 212 DGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVP 33
DGPP DD CPICFG+F PC+ NCGHW+C +CIL W+Y A + CKCP+C IN+L P
Sbjct: 25 DGPPVDDCCPICFGDFTIPCKANCGHWYCANCILQFWNYSSASKPCKCPMCSRYINRLTP 84
Query: 32 EPSLFLQQEE 3
E SL LQQE+
Sbjct: 85 ESSLSLQQEQ 94
>ref|XP_006423067.1| hypothetical protein CICLE_v10029827mg, partial [Citrus clementina]
gi|557525001|gb|ESR36307.1| hypothetical protein
CICLE_v10029827mg, partial [Citrus clementina]
Length = 314
Score = 111 bits (277), Expect = 1e-22
Identities = 43/70 (61%), Positives = 52/70 (74%)
Frame = -3
Query: 212 DGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVP 33
DGPP DD CPICFG+F PC+ NCGHW+C +CIL W+Y A + CKCP+C IN+L P
Sbjct: 127 DGPPVDDCCPICFGDFTIPCKANCGHWYCANCILQFWNYSSASKPCKCPMCSRYINRLTP 186
Query: 32 EPSLFLQQEE 3
E SL LQQE+
Sbjct: 187 ESSLSLQQEQ 196
>ref|XP_006384443.1| hypothetical protein POPTR_0004s15130g [Populus trichocarpa]
gi|550341061|gb|ERP62240.1| hypothetical protein
POPTR_0004s15130g [Populus trichocarpa]
Length = 182
Score = 109 bits (273), Expect = 3e-22
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -3
Query: 212 DGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVP 33
+GPP DD CPICFG F+ PC+ NCGHW+CGSCIL W Y G +CKCP+C S I+ L P
Sbjct: 48 EGPPLDDCCPICFGTFDVPCKANCGHWYCGSCILQYWKYSGPSSRCKCPMCSSRISNLTP 107
Query: 32 EPSLFLQQEE 3
E SL QQE+
Sbjct: 108 EASLHGQQEQ 117
>ref|XP_006384442.1| hypothetical protein POPTR_0004s15130g [Populus trichocarpa]
gi|550341060|gb|ERP62239.1| hypothetical protein
POPTR_0004s15130g [Populus trichocarpa]
Length = 239
Score = 109 bits (273), Expect = 3e-22
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -3
Query: 212 DGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVP 33
+GPP DD CPICFG F+ PC+ NCGHW+CGSCIL W Y G +CKCP+C S I+ L P
Sbjct: 48 EGPPLDDCCPICFGTFDVPCKANCGHWYCGSCILQYWKYSGPSSRCKCPMCSSRISNLTP 107
Query: 32 EPSLFLQQEE 3
E SL QQE+
Sbjct: 108 EASLHGQQEQ 117
>ref|XP_002330318.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 109 bits (273), Expect = 3e-22
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -3
Query: 212 DGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVP 33
+GPP DD CPICFG F+ PC+ NCGHW+CGSCIL W Y G +CKCP+C S I+ L P
Sbjct: 4 EGPPLDDCCPICFGTFDVPCKANCGHWYCGSCILQYWKYSGPSSRCKCPMCSSRISNLTP 63
Query: 32 EPSLFLQQEE 3
E SL QQE+
Sbjct: 64 EASLHGQQEQ 73
>ref|NP_567943.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|63003762|gb|AAY25410.1| At4g33940 [Arabidopsis
thaliana] gi|87116618|gb|ABD19673.1| At4g33940
[Arabidopsis thaliana] gi|332660897|gb|AEE86297.1|
RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 262
Score = 106 bits (265), Expect = 3e-21
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = -3
Query: 212 DGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVP 33
+ PP DDVCPICFG F PC NCGHW+CG+CIL W+Y R CKCP+C I KL P
Sbjct: 66 ESPPEDDVCPICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKLSP 125
Query: 32 EPSLFLQQEE 3
EPSL +QE+
Sbjct: 126 EPSLQERQEQ 135
>dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]
Length = 252
Score = 106 bits (265), Expect = 3e-21
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = -3
Query: 212 DGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVP 33
+ PP DDVCPICFG F PC NCGHW+CG+CIL W+Y R CKCP+C I KL P
Sbjct: 56 ESPPEDDVCPICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKLSP 115
Query: 32 EPSLFLQQEE 3
EPSL +QE+
Sbjct: 116 EPSLQERQEQ 125
>emb|CAA19876.1| putative protein [Arabidopsis thaliana] gi|7270343|emb|CAB80111.1|
putative protein [Arabidopsis thaliana]
Length = 670
Score = 106 bits (265), Expect = 3e-21
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = -3
Query: 212 DGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVP 33
+ PP DDVCPICFG F PC NCGHW+CG+CIL W+Y R CKCP+C I KL P
Sbjct: 66 ESPPEDDVCPICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKLSP 125
Query: 32 EPSLFLQQEE 3
EPSL +QE+
Sbjct: 126 EPSLQERQEQ 135
>gb|AAM62531.1| unknown [Arabidopsis thaliana]
Length = 262
Score = 106 bits (265), Expect = 3e-21
Identities = 42/70 (60%), Positives = 49/70 (70%)
Frame = -3
Query: 212 DGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVP 33
+ PP DDVCPICFG F PC NCGHW+CG+CIL W+Y R CKCP+C I KL P
Sbjct: 66 ESPPEDDVCPICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKLSP 125
Query: 32 EPSLFLQQEE 3
EPSL +QE+
Sbjct: 126 EPSLQERQEQ 135
>ref|XP_002521847.1| Armadillo repeat-containing protein, putative [Ricinus communis]
gi|223538885|gb|EEF40483.1| Armadillo repeat-containing
protein, putative [Ricinus communis]
Length = 719
Score = 104 bits (259), Expect = 1e-20
Identities = 40/68 (58%), Positives = 49/68 (72%)
Frame = -3
Query: 206 PPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVPEP 27
PP DD CPICFG F PC++ CGHW+CGSCIL W+Y A + CKCP+C S I KL PE
Sbjct: 61 PPGDDCCPICFGTFTIPCKSICGHWYCGSCILQYWNYSAASKPCKCPMCASRITKLTPEA 120
Query: 26 SLFLQQEE 3
SL+ Q ++
Sbjct: 121 SLYSQHQD 128
>ref|XP_002869184.1| hypothetical protein ARALYDRAFT_328350 [Arabidopsis lyrata subsp.
lyrata] gi|297315020|gb|EFH45443.1| hypothetical protein
ARALYDRAFT_328350 [Arabidopsis lyrata subsp. lyrata]
Length = 683
Score = 102 bits (255), Expect = 4e-20
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = -3
Query: 206 PPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVPEP 27
PP DDVCPICFG F PC NCGHW+CG+CIL W+Y R CKCP+C I KL PE
Sbjct: 68 PPEDDVCPICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKLSPEA 127
Query: 26 SLFLQQEE 3
SL +QE+
Sbjct: 128 SLQERQEQ 135
>gb|EOX98193.1| RING/U-box superfamily protein, putative [Theobroma cacao]
Length = 231
Score = 101 bits (252), Expect = 9e-20
Identities = 39/68 (57%), Positives = 47/68 (69%)
Frame = -3
Query: 206 PPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVPEP 27
PP DD CPICFG F PC +NCGHW+CGSCIL W+Y + CKCP+C I L+PE
Sbjct: 23 PPDDDCCPICFGSFTVPCRSNCGHWYCGSCILQFWNYSSTSKPCKCPMCTCKIVNLMPEV 82
Query: 26 SLFLQQEE 3
SL QQ++
Sbjct: 83 SLQQQQDQ 90
>ref|XP_006412296.1| hypothetical protein EUTSA_v10026077mg [Eutrema salsugineum]
gi|557113466|gb|ESQ53749.1| hypothetical protein
EUTSA_v10026077mg [Eutrema salsugineum]
Length = 211
Score = 100 bits (248), Expect = 3e-19
Identities = 41/68 (60%), Positives = 44/68 (64%)
Frame = -3
Query: 206 PPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVPEP 27
PP DD CPICF F PC NCGHW+CGSCIL WSY R CKCP+C I KL PE
Sbjct: 61 PPEDDCCPICFSSFTVPCRGNCGHWYCGSCILQYWSYAAVSRPCKCPMCVRHITKLSPEA 120
Query: 26 SLFLQQEE 3
SL QE+
Sbjct: 121 SLQQCQEQ 128
>ref|XP_006412295.1| hypothetical protein EUTSA_v10026077mg [Eutrema salsugineum]
gi|557113465|gb|ESQ53748.1| hypothetical protein
EUTSA_v10026077mg [Eutrema salsugineum]
Length = 249
Score = 100 bits (248), Expect = 3e-19
Identities = 41/68 (60%), Positives = 44/68 (64%)
Frame = -3
Query: 206 PPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICCSPINKLVPEP 27
PP DD CPICF F PC NCGHW+CGSCIL WSY R CKCP+C I KL PE
Sbjct: 61 PPEDDCCPICFSSFTVPCRGNCGHWYCGSCILQYWSYAAVSRPCKCPMCVRHITKLSPEA 120
Query: 26 SLFLQQEE 3
SL QE+
Sbjct: 121 SLQQCQEQ 128
>ref|XP_006349363.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X3
[Solanum tuberosum]
Length = 268
Score = 97.8 bits (242), Expect = 1e-18
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = -3
Query: 236 AELKMKKYDGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICC 57
AE + + PP+DD CPICFG F PC CGHW+CG CIL W+Y A + C CP+C
Sbjct: 112 AENAFLRTEKPPTDDCCPICFGNFVVPCRGPCGHWYCGGCILQYWNYGAALQPCNCPMCS 171
Query: 56 SPINKLVPEPSLFLQQE 6
+ L PE SL+ QQ+
Sbjct: 172 RKLTDLTPEASLYSQQD 188
>ref|XP_006349362.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X2
[Solanum tuberosum]
Length = 310
Score = 97.8 bits (242), Expect = 1e-18
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = -3
Query: 236 AELKMKKYDGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICC 57
AE + + PP+DD CPICFG F PC CGHW+CG CIL W+Y A + C CP+C
Sbjct: 112 AENAFLRTEKPPTDDCCPICFGNFVVPCRGPCGHWYCGGCILQYWNYGAALQPCNCPMCS 171
Query: 56 SPINKLVPEPSLFLQQE 6
+ L PE SL+ QQ+
Sbjct: 172 RKLTDLTPEASLYSQQD 188
>ref|XP_006349361.1| PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X1
[Solanum tuberosum]
Length = 316
Score = 97.8 bits (242), Expect = 1e-18
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = -3
Query: 236 AELKMKKYDGPPSDDVCPICFGEFETPCETNCGHWFCGSCILLLWSYRGAFRQCKCPICC 57
AE + + PP+DD CPICFG F PC CGHW+CG CIL W+Y A + C CP+C
Sbjct: 112 AENAFLRTEKPPTDDCCPICFGNFVVPCRGPCGHWYCGGCILQYWNYGAALQPCNCPMCS 171
Query: 56 SPINKLVPEPSLFLQQE 6
+ L PE SL+ QQ+
Sbjct: 172 RKLTDLTPEASLYSQQD 188