BLASTX nr result

ID: Catharanthus22_contig00033571 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00033571
         (303 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598953.1| PHD-finger family protein expressed [Medicag...    62   8e-08

>ref|XP_003598953.1| PHD-finger family protein expressed [Medicago truncatula]
           gi|355488001|gb|AES69204.1| PHD-finger family protein
           expressed [Medicago truncatula]
          Length = 560

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 34/95 (35%), Positives = 53/95 (55%)
 Frame = +2

Query: 5   GVVEAIVTCARCKTSHEHIYCKRTYQLNLPEIWVCEECEALINGSSLNAPGKLQCDSRHP 184
           G  E IVTC++CK + EH+YC +   + +P+ W+CE C++  NGS+       QC ++  
Sbjct: 21  GFGEVIVTCSKCKVNREHVYCMKINLMEVPDYWLCEPCQS-NNGST------SQCIAKQD 73

Query: 185 NELPNELKQNPVDGKKVQTGKVKPLSVEEVIMLTS 289
           + L    +Q     +    GKVK L  +EVI L+S
Sbjct: 74  SGLQASKRQQ--SARTGPRGKVKYLQEDEVIKLSS 106


Top