BLASTX nr result

ID: Catharanthus22_contig00032904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00032904
         (327 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006476143.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06
ref|XP_006450621.1| hypothetical protein CICLE_v10008407mg [Citr...    55   7e-06

>ref|XP_006476143.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g48000-like [Citrus sinensis]
          Length = 423

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = -1

Query: 195 SNTASFQCPNLNSFVSKLLQQPIFSIKAGLDSEEKCSSSIFKSQVFSWDALVIALKSSSP 16
           +NT S    + N  +S+LLQ P+  IK  LDS +  +   F S  FSWDAL+ +L+SSSP
Sbjct: 30  TNTNSTSVSSSNPLISRLLQVPVSQIKTTLDSVDIFA---FNSSQFSWDALITSLQSSSP 86

Query: 15  KKANL 1
           KKA L
Sbjct: 87  KKAQL 91


>ref|XP_006450621.1| hypothetical protein CICLE_v10008407mg [Citrus clementina]
           gi|557553847|gb|ESR63861.1| hypothetical protein
           CICLE_v10008407mg [Citrus clementina]
          Length = 423

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 31/65 (47%), Positives = 41/65 (63%)
 Frame = -1

Query: 195 SNTASFQCPNLNSFVSKLLQQPIFSIKAGLDSEEKCSSSIFKSQVFSWDALVIALKSSSP 16
           +NT S    + N  +S+LLQ P+  IK  LDS +  +   F S  FSWDAL+ +L+SSSP
Sbjct: 30  TNTNSTSVSSSNPLISRLLQVPVSHIKTTLDSVDIFA---FNSSQFSWDALITSLQSSSP 86

Query: 15  KKANL 1
           KKA L
Sbjct: 87  KKAQL 91


Top