BLASTX nr result
ID: Catharanthus22_contig00032559
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00032559
(435 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like iso... 156 3e-36
ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like iso... 155 4e-36
ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 153 3e-35
ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citr... 151 1e-34
ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citr... 148 8e-34
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v... 148 8e-34
emb|CBI26376.3| unnamed protein product [Vitis vinifera] 148 8e-34
ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus ... 146 2e-33
ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Caps... 145 7e-33
ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Ci... 143 3e-32
ref|XP_006350672.1| PREDICTED: DNA repair protein XRCC4-like iso... 142 4e-32
ref|XP_006406090.1| hypothetical protein EUTSA_v10022194mg [Eutr... 142 4e-32
ref|XP_004241022.1| PREDICTED: DNA repair protein XRCC4-like iso... 142 5e-32
ref|XP_002264931.1| PREDICTED: DNA repair protein XRCC4-like [Vi... 142 5e-32
gb|EMJ27301.1| hypothetical protein PRUPE_ppa010906mg [Prunus pe... 142 6e-32
gb|ACJ85144.1| unknown [Medicago truncatula] 142 6e-32
ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatul... 142 6e-32
gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis] 140 2e-31
gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Th... 140 2e-31
gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Th... 140 2e-31
>ref|XP_006350671.1| PREDICTED: DNA repair protein XRCC4-like isoform X1 [Solanum
tuberosum]
Length = 267
Score = 156 bits (394), Expect = 3e-36
Identities = 76/104 (73%), Positives = 83/104 (79%)
Frame = -2
Query: 314 SQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEERA 135
S +HTCLKL IS + E+IFVKGTW+SS F L ITDGL +WTC ASEEE+EERA
Sbjct: 5 SPKHTCLKLVISNK--------EQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERA 56
Query: 134 SQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
SQWDQPV EYIDLAEKYLGFQQPGS YG+ DAG G KRLSWTFE
Sbjct: 57 SQWDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKRLSWTFE 100
>ref|XP_004241021.1| PREDICTED: DNA repair protein XRCC4-like isoform 1 [Solanum
lycopersicum]
Length = 254
Score = 155 bits (393), Expect = 4e-36
Identities = 76/104 (73%), Positives = 84/104 (80%)
Frame = -2
Query: 314 SQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEERA 135
S +HTCLKL IS + E+IFVKGTW+SS F L ITDGL++WTC ASEEE+EERA
Sbjct: 5 SPKHTCLKLVISNK--------EQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERA 56
Query: 134 SQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
SQWDQPV EYIDL EKYLGFQQPGSVYG+ DAG G KRLSWTFE
Sbjct: 57 SQWDQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKRLSWTFE 100
>ref|XP_006489536.1| PREDICTED: DNA repair protein XRCC4-like [Citrus sinensis]
Length = 256
Score = 153 bits (386), Expect = 3e-35
Identities = 70/102 (68%), Positives = 81/102 (79%)
Frame = -2
Query: 308 RHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEERASQ 129
RHTCLKLEIS D IFVKGTW+ + F L+ITDGLN W C ASEE++++RA+Q
Sbjct: 4 RHTCLKLEISDATDP-------IFVKGTWFETHFDLSITDGLNVWLCNASEEQVKDRAAQ 56
Query: 128 WDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
WDQPV EYI LAE+YLGFQQPGSVYG++DA GCKRLSWTFE
Sbjct: 57 WDQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFE 98
>ref|XP_006420167.1| hypothetical protein CICLE_v10005689mg [Citrus clementina]
gi|557522040|gb|ESR33407.1| hypothetical protein
CICLE_v10005689mg [Citrus clementina]
Length = 256
Score = 151 bits (381), Expect = 1e-34
Identities = 69/102 (67%), Positives = 80/102 (78%)
Frame = -2
Query: 308 RHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEERASQ 129
RHTCLKLEI D IF KGTW+ + F L+ITDGLNAW C ASEE++++RA+Q
Sbjct: 4 RHTCLKLEIPDATDP-------IFAKGTWFQTHFDLSITDGLNAWLCNASEEQVKDRAAQ 56
Query: 128 WDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
WDQPV EYI LAE+YLGFQQPGSVYG++DA GCKRLSWTFE
Sbjct: 57 WDQPVTEYIKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFE 98
>ref|XP_006420162.1| hypothetical protein CICLE_v10005690mg [Citrus clementina]
gi|557522035|gb|ESR33402.1| hypothetical protein
CICLE_v10005690mg [Citrus clementina]
Length = 256
Score = 148 bits (373), Expect = 8e-34
Identities = 67/105 (63%), Positives = 81/105 (77%)
Frame = -2
Query: 317 DSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEER 138
++ HTCLKLEI D IFVKGTW+ + F L+ITDGLNAW C ASEE++++R
Sbjct: 2 EATSHTCLKLEIPDATDP-------IFVKGTWFQTHFDLSITDGLNAWLCNASEEQVKDR 54
Query: 137 ASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
A+ WDQPV EY+ LAE+YLGFQQPGSVYG++DA GCKRLSWTFE
Sbjct: 55 AALWDQPVTEYVKLAERYLGFQQPGSVYGFTDAADGCKRLSWTFE 99
>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
Length = 259
Score = 148 bits (373), Expect = 8e-34
Identities = 68/107 (63%), Positives = 85/107 (79%)
Frame = -2
Query: 323 MEDSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIE 144
ME + RH+CLKL+I ++ E IF+K TW+ S FHL+ITDGL+AW C ASE+E+
Sbjct: 1 MEPTPRHSCLKLQIPNQS-------EPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVR 53
Query: 143 ERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
ERA+QWDQPV +YI LAE++LGFQQPGSVYG+SDAG G +RLSWTFE
Sbjct: 54 ERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFE 100
>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 148 bits (373), Expect = 8e-34
Identities = 68/107 (63%), Positives = 85/107 (79%)
Frame = -2
Query: 323 MEDSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIE 144
ME + RH+CLKL+I ++ E IF+K TW+ S FHL+ITDGL+AW C ASE+E+
Sbjct: 1 MEPTPRHSCLKLQIPNQS-------EPIFIKATWFPSHFHLSITDGLHAWLCNASEDEVR 53
Query: 143 ERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
ERA+QWDQPV +YI LAE++LGFQQPGSVYG+SDAG G +RLSWTFE
Sbjct: 54 ERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLSWTFE 100
>ref|XP_002517008.1| DNA-repair protein XRCC4, putative [Ricinus communis]
gi|223543643|gb|EEF45171.1| DNA-repair protein XRCC4,
putative [Ricinus communis]
Length = 265
Score = 146 bits (369), Expect = 2e-33
Identities = 68/105 (64%), Positives = 82/105 (78%)
Frame = -2
Query: 317 DSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEER 138
++ RHTCLKLEI+ E IFVKGTW+ S FHL+ITDGLNAW C A+E +++ER
Sbjct: 11 ETARHTCLKLEIT----------EPIFVKGTWFDSHFHLSITDGLNAWVCNATEGQVKER 60
Query: 137 ASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
A+QWDQPV EYI+LAE YLGFQQPGS+Y ++DAG KRLSWTFE
Sbjct: 61 AAQWDQPVSEYINLAEHYLGFQQPGSIYRFADAGDSHKRLSWTFE 105
>ref|XP_006298402.1| hypothetical protein CARUB_v10014474mg [Capsella rubella]
gi|482567111|gb|EOA31300.1| hypothetical protein
CARUB_v10014474mg [Capsella rubella]
Length = 249
Score = 145 bits (365), Expect = 7e-33
Identities = 68/109 (62%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Frame = -2
Query: 323 MEDSQR--HTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEE 150
M +S+R HTCL+LEIS + IFVKGTWY SRF +++TDG ++W C A+EEE
Sbjct: 1 MVESERTKHTCLRLEISG--------ADPIFVKGTWYHSRFDISVTDGSSSWICNATEEE 52
Query: 149 IEERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
+ ERA+QWDQPV EY++LAE+YLGFQQP S+YG+SDA GCKRLSWTFE
Sbjct: 53 VAERAAQWDQPVSEYLELAEQYLGFQQPDSIYGFSDALEGCKRLSWTFE 101
>ref|XP_004495346.1| PREDICTED: DNA repair protein XRCC4-like [Cicer arietinum]
Length = 255
Score = 143 bits (360), Expect = 3e-32
Identities = 65/107 (60%), Positives = 82/107 (76%)
Frame = -2
Query: 323 MEDSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIE 144
ME+ +RHTCLKL+I+ E IFVKGTW+ + F+L+ITDG AW C ASEEE++
Sbjct: 1 MEEKKRHTCLKLQINGE--------EAIFVKGTWFDTHFNLSITDGFTAWYCYASEEELK 52
Query: 143 ERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
+RA+QWDQPV EY+ L+E YLGFQQ GS+Y ++DAG G KRLSWTFE
Sbjct: 53 QRAAQWDQPVSEYVQLSESYLGFQQHGSIYAFADAGDGHKRLSWTFE 99
>ref|XP_006350672.1| PREDICTED: DNA repair protein XRCC4-like isoform X2 [Solanum
tuberosum]
Length = 224
Score = 142 bits (359), Expect = 4e-32
Identities = 70/98 (71%), Positives = 77/98 (78%)
Frame = -2
Query: 314 SQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEERA 135
S +HTCLKL IS + E+IFVKGTW+SS F L ITDGL +WTC ASEEE+EERA
Sbjct: 5 SPKHTCLKLVISNK--------EQIFVKGTWFSSHFDLFITDGLQSWTCHASEEEVEERA 56
Query: 134 SQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKR 21
SQWDQPV EYIDLAEKYLGFQQPGS YG+ DAG G KR
Sbjct: 57 SQWDQPVSEYIDLAEKYLGFQQPGSAYGFDDAGTGHKR 94
>ref|XP_006406090.1| hypothetical protein EUTSA_v10022194mg [Eutrema salsugineum]
gi|557107236|gb|ESQ47543.1| hypothetical protein
EUTSA_v10022194mg [Eutrema salsugineum]
Length = 235
Score = 142 bits (359), Expect = 4e-32
Identities = 68/109 (62%), Positives = 84/109 (77%), Gaps = 2/109 (1%)
Frame = -2
Query: 323 MEDSQR--HTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEE 150
M +S+R HTCL+LEIS + IFVKGTWY SRF +++TDG ++W C A+EEE
Sbjct: 1 MVESERTKHTCLRLEISG--------ADPIFVKGTWYHSRFDISVTDGSSSWICNATEEE 52
Query: 149 IEERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
+ +RA+QWDQPV EY+ LAE+YLGFQQP SVYG+SDA GCKRLSWTFE
Sbjct: 53 VVDRAAQWDQPVSEYLKLAEQYLGFQQPDSVYGFSDALEGCKRLSWTFE 101
>ref|XP_004241022.1| PREDICTED: DNA repair protein XRCC4-like isoform 2 [Solanum
lycopersicum]
Length = 211
Score = 142 bits (358), Expect = 5e-32
Identities = 70/98 (71%), Positives = 78/98 (79%)
Frame = -2
Query: 314 SQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEERA 135
S +HTCLKL IS + E+IFVKGTW+SS F L ITDGL++WTC ASEEE+EERA
Sbjct: 5 SPKHTCLKLVISNK--------EQIFVKGTWFSSYFDLFITDGLHSWTCHASEEEVEERA 56
Query: 134 SQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKR 21
SQWDQPV EYIDL EKYLGFQQPGSVYG+ DAG G KR
Sbjct: 57 SQWDQPVSEYIDLGEKYLGFQQPGSVYGFDDAGTGHKR 94
>ref|XP_002264931.1| PREDICTED: DNA repair protein XRCC4-like [Vitis vinifera]
Length = 166
Score = 142 bits (358), Expect = 5e-32
Identities = 65/107 (60%), Positives = 82/107 (76%)
Frame = -2
Query: 323 MEDSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIE 144
ME + RH+CLKL+I ++ E IF+K TW+ S FHL+ITD L+ W C ASE+E+
Sbjct: 1 MEPTPRHSCLKLQIPNQS-------EPIFIKATWFPSHFHLSITDSLHTWLCNASEDEVR 53
Query: 143 ERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
ERA+QWDQPV +YI LAE++LGFQQPGSVYG+SDAG G +RL WTFE
Sbjct: 54 ERAAQWDQPVSDYIALAERFLGFQQPGSVYGFSDAGDGHRRLPWTFE 100
>gb|EMJ27301.1| hypothetical protein PRUPE_ppa010906mg [Prunus persica]
Length = 231
Score = 142 bits (357), Expect = 6e-32
Identities = 66/115 (57%), Positives = 84/115 (73%)
Frame = -2
Query: 347 KSFKSDPYMEDSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTC 168
+SF+ S +HTCLKL++ + + I+VKGTW+ SRF L+ITDGLNAW C
Sbjct: 46 ESFQPATMETPSPKHTCLKLQLK-------EAQQPIYVKGTWFESRFDLSITDGLNAWIC 98
Query: 167 TASEEEIEERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
ASEE++ +RA+QWDQPV EY+ LAE+YLGFQ P S YG++DAG G KRLSWTFE
Sbjct: 99 HASEEQVRDRAAQWDQPVSEYVALAERYLGFQHPDSAYGFADAGDGHKRLSWTFE 153
>gb|ACJ85144.1| unknown [Medicago truncatula]
Length = 135
Score = 142 bits (357), Expect = 6e-32
Identities = 63/107 (58%), Positives = 85/107 (79%)
Frame = -2
Query: 323 MEDSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIE 144
ME+ +RHTCLKL+++ E E IFVKGTW+++ F+L+ITDG +W C ASE+E++
Sbjct: 1 MEEKKRHTCLKLQLT--------EEESIFVKGTWFNTHFNLSITDGSTSWHCNASEDEVK 52
Query: 143 ERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
+RA+QWDQPV EY++L+E+YLGFQQP SVY ++DAG KRLSWTFE
Sbjct: 53 QRAAQWDQPVEEYVELSERYLGFQQPESVYAFADAGDAHKRLSWTFE 99
>ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatula]
gi|355479842|gb|AES61045.1| DNA repair protein XRCC4
[Medicago truncatula]
Length = 256
Score = 142 bits (357), Expect = 6e-32
Identities = 63/107 (58%), Positives = 85/107 (79%)
Frame = -2
Query: 323 MEDSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIE 144
ME+ +RHTCLKL+++ E E IFVKGTW+++ F+L+ITDG +W C ASE+E++
Sbjct: 1 MEEKKRHTCLKLQLT--------EEESIFVKGTWFNTHFNLSITDGSTSWHCNASEDEVK 52
Query: 143 ERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
+RA+QWDQPV EY++L+E+YLGFQQP SVY ++DAG KRLSWTFE
Sbjct: 53 QRAAQWDQPVEEYVELSERYLGFQQPESVYAFADAGDAHKRLSWTFE 99
>gb|EXB29874.1| DNA repair protein XRCC4 [Morus notabilis]
Length = 257
Score = 140 bits (353), Expect = 2e-31
Identities = 65/107 (60%), Positives = 82/107 (76%)
Frame = -2
Query: 323 MEDSQRHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIE 144
ME+S+RHTCLKLE ++ + IFV TW+ S F+L++TDG +AW C ASEEE+
Sbjct: 1 MEESKRHTCLKLE--------PKDSDPIFVNATWFPSHFNLSVTDGHHAWICHASEEEVR 52
Query: 143 ERASQWDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
+RA+QWDQPV EY+ LAE+YLGFQQP SVY ++DAG G KRLSWTFE
Sbjct: 53 DRAAQWDQPVPEYVALAERYLGFQQPDSVYAFADAGDGHKRLSWTFE 99
>gb|EOY05932.1| DNA ligase iv-binding protein XRCC4 isoform 3 [Theobroma cacao]
Length = 277
Score = 140 bits (352), Expect = 2e-31
Identities = 65/102 (63%), Positives = 79/102 (77%)
Frame = -2
Query: 308 RHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEERASQ 129
RHTCLKLEI + E IFVKGTW+ + F ++ITDGL+AW C A+EEE++ERA+Q
Sbjct: 10 RHTCLKLEIPS--------TEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQ 61
Query: 128 WDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
WDQPV EYI+LAE+YLGFQQ GSVY ++DAG KRLSW FE
Sbjct: 62 WDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFE 103
>gb|EOY05931.1| DNA ligase iv-binding protein XRCC4 isoform 2 [Theobroma cacao]
Length = 276
Score = 140 bits (352), Expect = 2e-31
Identities = 65/102 (63%), Positives = 79/102 (77%)
Frame = -2
Query: 308 RHTCLKLEISARNDSGTQEVERIFVKGTWYSSRFHLAITDGLNAWTCTASEEEIEERASQ 129
RHTCLKLEI + E IFVKGTW+ + F ++ITDGL+AW C A+EEE++ERA+Q
Sbjct: 10 RHTCLKLEIPS--------TEPIFVKGTWFDAHFDISITDGLHAWVCNATEEEVKERAAQ 61
Query: 128 WDQPVVEYIDLAEKYLGFQQPGSVYGYSDAGGGCKRLSWTFE 3
WDQPV EYI+LAE+YLGFQQ GSVY ++DAG KRLSW FE
Sbjct: 62 WDQPVTEYIELAERYLGFQQSGSVYRFADAGDDHKRLSWAFE 103