BLASTX nr result

ID: Catharanthus22_contig00032383 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00032383
         (314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGG82489.1| remorin 2 [Datisca glomerata]                           60   3e-07
gb|AFK42693.1| unknown [Lotus japonicus]                               60   3e-07
ref|XP_006363315.1| PREDICTED: remorin [Solanum tuberosum]             58   1e-06
ref|XP_004240737.1| PREDICTED: remorin-like [Solanum lycopersicum]     58   1e-06
ref|XP_003580218.1| PREDICTED: remorin-like isoform 2 [Brachypod...    57   3e-06
ref|XP_004976344.1| PREDICTED: remorin-like [Setaria italica]          57   3e-06
ref|XP_004308093.1| PREDICTED: remorin-like isoform 2 [Fragaria ...    57   3e-06
ref|XP_002271460.1| PREDICTED: remorin [Vitis vinifera] gi|29774...    57   3e-06
ref|NP_001237267.1| uncharacterized protein LOC100527523 [Glycin...    56   4e-06
ref|XP_002448229.1| hypothetical protein SORBIDRAFT_06g023630 [S...    56   4e-06
ref|XP_002298047.1| hypothetical protein POPTR_0001s09090g [Popu...    56   4e-06
gb|EXB37386.1| Pollen-specific protein SF3 [Morus notabilis]           55   7e-06
ref|XP_003580217.1| PREDICTED: remorin-like isoform 1 [Brachypod...    55   7e-06
ref|NP_001274955.1| putative remorin a3b4 [Solanum tuberosum] gi...    55   1e-05

>gb|AGG82489.1| remorin 2 [Datisca glomerata]
          Length = 187

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 39/91 (42%), Positives = 53/91 (58%), Gaps = 15/91 (16%)
 Frame = +2

Query: 86  MGEEQTTKVDSQTFAAKEK------RSEKSFVII---SEKKPLLQSEK------DENHGD 220
           MGE++   V+++   A+E+        EKS  +I     K  L   EK      +++ G 
Sbjct: 1   MGEKEPKNVENEAIPAEEQVAQKDVAEEKSVTVIPLSDHKSSLSVPEKISDAASEKSAGG 60

Query: 221 AKDRDAEFARLELEKRLALIKAWEESEKTKA 313
           + DRDA  AR+E EKRLALIKAWEESEKT+A
Sbjct: 61  SIDRDAVLARVETEKRLALIKAWEESEKTRA 91


>gb|AFK42693.1| unknown [Lotus japonicus]
          Length = 194

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 40/87 (45%), Positives = 51/87 (58%), Gaps = 13/87 (14%)
 Frame = +2

Query: 92  EEQTTKVDS---QTFAAKEKRSEKSFVIISEK------KPLLQSEKDENH----GDAKDR 232
           E QT  VDS   Q    +EK SEK   +  E+       P++Q+  D++     G + DR
Sbjct: 12  ESQTEFVDSVSEQEPQVEEKESEKPEAVTQEEPHKEVPSPIVQNVADDDAKKVTGGSVDR 71

Query: 233 DAEFARLELEKRLALIKAWEESEKTKA 313
           DA  AR+  EKRLALIKAWEESE+TKA
Sbjct: 72  DAALARVVTEKRLALIKAWEESERTKA 98


>ref|XP_006363315.1| PREDICTED: remorin [Solanum tuberosum]
          Length = 185

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 21/97 (21%)
 Frame = +2

Query: 86  MGEEQTTKVDSQTFAAKEKRSEKSFVIISEKKPLLQSEKDENHGDAK------------- 226
           MGEE+  KV++    A+EK      +++S   P    E ++ H D+K             
Sbjct: 1   MGEEEAKKVETDEHVAEEKA-----IVLSTVPP--SKELEDKHDDSKALVIVEPETKALV 53

Query: 227 --------DRDAEFARLELEKRLALIKAWEESEKTKA 313
                   DRDA  ARL  EKRL+LIKAWEESEK+KA
Sbjct: 54  PVEKKGSIDRDATLARLTTEKRLSLIKAWEESEKSKA 90


>ref|XP_004240737.1| PREDICTED: remorin-like [Solanum lycopersicum]
          Length = 185

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 41/94 (43%), Positives = 50/94 (53%), Gaps = 18/94 (19%)
 Frame = +2

Query: 86  MGEEQTTKVDSQTFAAKEKR-----------------SEKSFVIIS-EKKPLLQSEKDEN 211
           MGEE+  KV++   AA+EK                    K+ VI+  E K L+  EK   
Sbjct: 1   MGEEEAKKVETAEHAAEEKAIVLSTVPPSEESKDKPDDSKALVIVEPETKALVPVEKK-- 58

Query: 212 HGDAKDRDAEFARLELEKRLALIKAWEESEKTKA 313
              + DRDA  ARL  EKRL+LIKAWEESEK KA
Sbjct: 59  --GSIDRDATLARLTTEKRLSLIKAWEESEKAKA 90


>ref|XP_003580218.1| PREDICTED: remorin-like isoform 2 [Brachypodium distachyon]
          Length = 212

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/85 (40%), Positives = 49/85 (57%)
 Frame = +2

Query: 59  EKNFLKKESMGEEQTTKVDSQTFAAKEKRSEKSFVIISEKKPLLQSEKDENHGDAKDRDA 238
           EK  +   +  EE+    DS+     EK    S   ++++KP   +++   HG + DRD 
Sbjct: 38  EKAVIPAPAAEEEKPPVDDSKALVVVEKLQLNS---VADEKP---ADEKAAHGGSNDRDI 91

Query: 239 EFARLELEKRLALIKAWEESEKTKA 313
             AR+E EKR +LIKAWEE+EKTKA
Sbjct: 92  ALARVETEKRNSLIKAWEENEKTKA 116


>ref|XP_004976344.1| PREDICTED: remorin-like [Setaria italica]
          Length = 212

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 10/89 (11%)
 Frame = +2

Query: 77  KESMGEEQTTKVDSQTFAAKEKR--------SEKSFVIISE--KKPLLQSEKDENHGDAK 226
           KE + EE+     S+  AA+EK           K+  I+ +   +P  +    E  G + 
Sbjct: 28  KEDVAEEKAVIPASEPPAAEEKPVVEEKPADDSKALAIVEKVADEPAAEKPAAEKQGSSN 87

Query: 227 DRDAEFARLELEKRLALIKAWEESEKTKA 313
           DRD   AR+E EKR +LIKAWEE+EKTKA
Sbjct: 88  DRDLALARVETEKRNSLIKAWEENEKTKA 116


>ref|XP_004308093.1| PREDICTED: remorin-like isoform 2 [Fragaria vesca subsp. vesca]
          Length = 197

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 30/73 (41%), Positives = 43/73 (58%)
 Frame = +2

Query: 92  EEQTTKVDSQTFAAKEKRSEKSFVIISEKKPLLQSEKDENHGDAKDRDAEFARLELEKRL 271
           EE+    ++     KEK  EK+     E K +   EK++   +  DRDA  AR+E EK++
Sbjct: 30  EEKPAVEEAPKEECKEKSQEKAPEPADESKAVAIVEKEKKSKEVSDRDAVLARVETEKKI 89

Query: 272 ALIKAWEESEKTK 310
           +LI AWEESEK+K
Sbjct: 90  SLINAWEESEKSK 102


>ref|XP_002271460.1| PREDICTED: remorin [Vitis vinifera] gi|297742546|emb|CBI34695.3|
           unnamed protein product [Vitis vinifera]
          Length = 187

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/89 (41%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
 Frame = +2

Query: 86  MGEEQTTKVDSQTFAAKEKRSEKSFVI-------ISEKKPLLQSEK------DENHGDAK 226
           MG E+  K D+   A +++  EKS +        +S  K     EK      ++N G   
Sbjct: 1   MGAEEAKK-DTSEVATEDQAQEKSVIPLPDPVDKVSRSKTSANVEKATDNPNEKNSGATA 59

Query: 227 DRDAEFARLELEKRLALIKAWEESEKTKA 313
           +RDA  A +E EKRLALIKAWEESEK+KA
Sbjct: 60  ERDAVLAAIETEKRLALIKAWEESEKSKA 88


>ref|NP_001237267.1| uncharacterized protein LOC100527523 [Glycine max]
           gi|255632538|gb|ACU16619.1| unknown [Glycine max]
          Length = 194

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/62 (53%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
 Frame = +2

Query: 131 AKEKRSEKSFVIISEK-KPLLQSEKDENHGDAKDRDAEFARLELEKRLALIKAWEESEKT 307
           AK  R     VI+S+K K  + +    +  D+ DRDA  AR+E EKRLALI+AWEESEKT
Sbjct: 36  AKWNRFRSFLVILSKKVKKKVPTTTRTDSKDSVDRDAVLARVESEKRLALIRAWEESEKT 95

Query: 308 KA 313
           KA
Sbjct: 96  KA 97


>ref|XP_002448229.1| hypothetical protein SORBIDRAFT_06g023630 [Sorghum bicolor]
           gi|241939412|gb|EES12557.1| hypothetical protein
           SORBIDRAFT_06g023630 [Sorghum bicolor]
          Length = 212

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
 Frame = +2

Query: 77  KESMGEEQTTKVDSQTFAAKEKR---SEKSFVIISE--KKPLLQSEKDENHGDAKDRDAE 241
           KE + EE+     ++  AA+EK      K+  I+ +   +P  +    E  G + DRD  
Sbjct: 33  KEDVAEEKAVIPATEPPAAEEKPPADDSKALAIVEKVADEPAPEKPAAEKQGGSNDRDLA 92

Query: 242 FARLELEKRLALIKAWEESEKTKA 313
            AR+E EKR +LIKAWEE+EKTKA
Sbjct: 93  LARVETEKRNSLIKAWEENEKTKA 116


>ref|XP_002298047.1| hypothetical protein POPTR_0001s09090g [Populus trichocarpa]
           gi|222845305|gb|EEE82852.1| hypothetical protein
           POPTR_0001s09090g [Populus trichocarpa]
          Length = 203

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/92 (41%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
 Frame = +2

Query: 59  EKNFLKKESMGEEQTTKVDSQTFAAKEKRS-------EKSFVIISEKKPLLQSEKDENHG 217
           EK   K ES G    T+ +      +EK +       EKS V+++EK     +    + G
Sbjct: 17  EKEPRKAESEGASLPTQAEEHGPVKEEKEAPLNDYANEKSSVLVTEKVADPPATAKNSRG 76

Query: 218 DAKDRDAEFARLELEKRLALIKAWEESEKTKA 313
              DRDA  AR+E EKR ALIKAWEE+EK KA
Sbjct: 77  P-NDRDAVLARVEAEKRCALIKAWEENEKAKA 107


>gb|EXB37386.1| Pollen-specific protein SF3 [Morus notabilis]
          Length = 421

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 34/80 (42%), Positives = 49/80 (61%)
 Frame = +2

Query: 74  KKESMGEEQTTKVDSQTFAAKEKRSEKSFVIISEKKPLLQSEKDENHGDAKDRDAEFARL 253
           K+E   +E+  K + +   A+EK   KS   + ++K +     ++N     DRDA  A++
Sbjct: 44  KEEKKDQEKEGKEEEKKDVAEEK---KSLSPVPQEKAVQNPVVEKNQ--EVDRDAVLAQV 98

Query: 254 ELEKRLALIKAWEESEKTKA 313
           E EKRLALIKAWEESEKTK+
Sbjct: 99  ETEKRLALIKAWEESEKTKS 118


>ref|XP_003580217.1| PREDICTED: remorin-like isoform 1 [Brachypodium distachyon]
          Length = 207

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/85 (38%), Positives = 48/85 (56%)
 Frame = +2

Query: 59  EKNFLKKESMGEEQTTKVDSQTFAAKEKRSEKSFVIISEKKPLLQSEKDENHGDAKDRDA 238
           EK  +   +  EE+    DS+     EK        ++++KP   +++   HG + DRD 
Sbjct: 38  EKAVIPAPAAEEEKPPVDDSKALVVVEK--------VADEKP---ADEKAAHGGSNDRDI 86

Query: 239 EFARLELEKRLALIKAWEESEKTKA 313
             AR+E EKR +LIKAWEE+EKTKA
Sbjct: 87  ALARVETEKRNSLIKAWEENEKTKA 111


>ref|NP_001274955.1| putative remorin a3b4 [Solanum tuberosum]
           gi|170660072|gb|ACB28484.1| putative remorin a3b4
           [Solanum tuberosum]
          Length = 199

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 31/60 (51%), Positives = 38/60 (63%)
 Frame = +2

Query: 134 KEKRSEKSFVIISEKKPLLQSEKDENHGDAKDRDAEFARLELEKRLALIKAWEESEKTKA 313
           KEK  +   ++  E K L+    DE    + DRDA  ARL  EKRL+LIKAWEESEK+KA
Sbjct: 47  KEKPDDSKVIVEPETKALVPV--DEKKEGSIDRDATLARLTTEKRLSLIKAWEESEKSKA 104


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