BLASTX nr result
ID: Catharanthus22_contig00032369
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00032369 (553 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 83 4e-14 dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 83 4e-14 dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 83 4e-14 gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 78 1e-12 gb|EOX92093.1| Uncharacterized protein TCM_001101 [Theobroma cacao] 77 3e-12 emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera] 76 5e-12 emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera] 75 8e-12 emb|CAN65498.1| hypothetical protein VITISV_028324 [Vitis vinifera] 75 8e-12 ref|XP_003567228.1| PREDICTED: putative ribonuclease H protein A... 75 1e-11 gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana] 74 2e-11 gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 74 2e-11 gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 74 2e-11 sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H pr... 74 2e-11 gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 74 2e-11 ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [S... 74 3e-11 gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo... 73 4e-11 gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 73 4e-11 gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi... 73 4e-11 gb|EAZ04413.1| hypothetical protein OsI_26557 [Oryza sativa Indi... 73 4e-11 gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 73 4e-11 >dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] Length = 1898 Score = 83.2 bits (204), Expect = 4e-14 Identities = 41/112 (36%), Positives = 62/112 (55%) Frame = +2 Query: 14 RKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRDIR 193 RKLH V ++C+P+N GGLGL+ ++ N L + AW++ N DKLW +VL KY Sbjct: 1370 RKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNA 1429 Query: 194 ELNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDGRL 349 + ++ S+ RS++ G VL + W + + FW D W+GDG L Sbjct: 1430 DFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPL 1481 >dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 83.2 bits (204), Expect = 4e-14 Identities = 41/112 (36%), Positives = 62/112 (55%) Frame = +2 Query: 14 RKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRDIR 193 RKLH V ++C+P+N GGLGL+ ++ N L + AW++ N DKLW +VL KY Sbjct: 838 RKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNA 897 Query: 194 ELNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDGRL 349 + ++ S+ RS++ G VL + W + + FW D W+GDG L Sbjct: 898 DFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPL 949 >dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] Length = 1366 Score = 83.2 bits (204), Expect = 4e-14 Identities = 41/112 (36%), Positives = 62/112 (55%) Frame = +2 Query: 14 RKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRDIR 193 RKLH V ++C+P+N GGLGL+ ++ N L + AW++ N DKLW +VL KY Sbjct: 838 RKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKNA 897 Query: 194 ELNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDGRL 349 + ++ S+ RS++ G VL + W + + FW D W+GDG L Sbjct: 898 DFLHLQSQSNCSWGWRSIMKGKDVLAGAIKWNVGNGRKINFWNDWWVGDGPL 949 >gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis thaliana] Length = 732 Score = 78.2 bits (191), Expect = 1e-12 Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 3/120 (2%) Frame = +2 Query: 14 RKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYR--D 187 RK H+++ +VC+P++ GGLG++ +++N LL++ WRL+ ++ LW++++ YR D Sbjct: 359 RKQHLISWKRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWARIMRCNYRVQD 418 Query: 188 IRELNLDKTTRTTSYTCRSLVVG-NKVL**HLAWEIDDDNFARFWTDNWMGDGRLRNLFL 364 +R+ K S T RS+ +G +V+ L+W I D FW D W+ + L L + Sbjct: 419 VRDGAWTKVRSVCSSTWRSVALGMREVVIPGLSWVIGDGREILFWMDKWLTNIPLAELLV 478 >gb|EOX92093.1| Uncharacterized protein TCM_001101 [Theobroma cacao] Length = 402 Score = 77.0 bits (188), Expect = 3e-12 Identities = 44/139 (31%), Positives = 69/139 (49%) Frame = +2 Query: 8 GPRKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRD 187 G +KLH ++ +C K G L + K N LLA+ W++ +N D LW +L KY Sbjct: 229 GQKKLHALSWKTICLSKELGRLQIMETKRFNLALLAKLGWQIWINKDPLWVDILKSKYLK 288 Query: 188 IRELNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDGRLRNLFLL 367 ++L K T YT RS++ ++L L ++ + A FW D+W G L Sbjct: 289 NQDLLSVKAKTTDPYTWRSILKSREILVKGLGMIPNNGHSALFWMDSWQACGPLLKFANR 348 Query: 368 GIDMEDHWLSVSSCCSKYG 424 I + + L V+S C++YG Sbjct: 349 EISVVESALPVASYCNEYG 367 >emb|CAN70998.1| hypothetical protein VITISV_023635 [Vitis vinifera] Length = 501 Score = 76.3 bits (186), Expect = 5e-12 Identities = 46/144 (31%), Positives = 72/144 (50%), Gaps = 15/144 (10%) Frame = +2 Query: 2 LDGPRKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKY 181 ++G R++H+V +C+ K GGLGL+H+KE NH LL + WR L + LW +V+ GK+ Sbjct: 127 VEGRRRIHLVRWTAICKDKKYGGLGLRHLKEFNHALLGKWLWRFSLERESLWRKVIVGKF 186 Query: 182 ---------RDIRE---LNLDKTTR---TTSYTCRSLVVGNKVL**HLAWEIDDDNFARF 316 R++RE ++L K R + S+ +GN RF Sbjct: 187 GEGEGGWTTREVRESYGMSLWKDIRKGWEEFFLRTSIGIGN-------------GRCTRF 233 Query: 317 WTDNWMGDGRLRNLFLLGIDMEDH 388 W D W G+ +L++LF L + H Sbjct: 234 WWDYWAGESKLKDLFPLLFRIASH 257 >emb|CAN81442.1| hypothetical protein VITISV_011546 [Vitis vinifera] Length = 843 Score = 75.5 bits (184), Expect = 8e-12 Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%) Frame = +2 Query: 2 LDGPRKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKY 181 ++G R++H+V +C+ K GGLGL+H+KE NH LL + WR L + W +V+ GK+ Sbjct: 469 VEGRRRIHLVRWTAICKDKKYGGLGLRHLKEFNHALLGKWLWRFSLERESFWRKVIVGKF 528 Query: 182 ---------RDIRE---LNLDKTTR---TTSYTCRSLVVGNKVL**HLAWEIDDDNFARF 316 R++RE ++L K R + S+ +GN RF Sbjct: 529 GEGEGGWTTREVRESYGMSLWKDIRKGWEEFFLKTSICIGN-------------GRCTRF 575 Query: 317 WTDNWMGDGRLRNLFLLGIDMEDH 388 W D W G+ +L+ LF L + H Sbjct: 576 WWDYWAGESKLKELFPLLFGIASH 599 >emb|CAN65498.1| hypothetical protein VITISV_028324 [Vitis vinifera] Length = 572 Score = 75.5 bits (184), Expect = 8e-12 Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 9/129 (6%) Frame = +2 Query: 8 GPRKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRD 187 G RK+H+V +C+ K GGLGL+++K+ NH LL + WR + + W +V+ GKY + Sbjct: 204 GRRKIHLVRWEVICKDKRHGGLGLRYLKDFNHALLGKWLWRFPIERESFWRRVIVGKYGE 263 Query: 188 IRELNLDKTTRTTSYTCRSLVVGNKVL**HLAWE---------IDDDNFARFWTDNWMGD 340 ++ + R + T V+ WE I + RFW D W+GD Sbjct: 264 VQGGWTTREVRESYGTGLWKVI-------RKGWEEFFLRTRIHIGNGRRTRFWWDMWVGD 316 Query: 341 GRLRNLFLL 367 +L++LF L Sbjct: 317 SKLKDLFPL 325 >ref|XP_003567228.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Brachypodium distachyon] Length = 820 Score = 74.7 bits (182), Expect = 1e-11 Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 2/112 (1%) Frame = +2 Query: 5 DGPRKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYR 184 +G RK H VA H++ +PK +GG G + M N LLA+ AWRLL D L +QVL +Y Sbjct: 312 NGKRKTHWVAWHRMTQPKGKGGFGFRDMHIFNQALLARQAWRLLEYPDSLCAQVLKARY- 370 Query: 185 DIRELNLDKT--TRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWM 334 R+ NL T T S T +++ G ++L + W + + R W DNW+ Sbjct: 371 -YRDGNLPDTVFTGNASSTWQAISYGLELLKHGMIWRVGNGTKIRVWCDNWI 421 >gb|AAF23831.1|AC007234_3 F1E22.12 [Arabidopsis thaliana] Length = 1055 Score = 73.9 bits (180), Expect = 2e-11 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 3/118 (2%) Frame = +2 Query: 14 RKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYR--D 187 +K H+V KVC PK GGLG++ K +N L+++ WRLL + LW+ VL KY + Sbjct: 191 KKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGE 250 Query: 188 IRELNLDKTTRTTSYTCRSLVVGNKVL**H-LAWEIDDDNFARFWTDNWMGDGRLRNL 358 IR+ + S T RS+ +G + + H + W D RFWTD W+ L L Sbjct: 251 IRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLEL 308 >gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1621 Score = 73.9 bits (180), Expect = 2e-11 Identities = 39/109 (35%), Positives = 59/109 (54%) Frame = +2 Query: 17 KLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRDIRE 196 K+H ++ +K+ PKN GGLG + + N +LA+ WRL+ + D L S+VL KY + + Sbjct: 1091 KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGD 1150 Query: 197 LNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDG 343 K T SYT RS+ G +VL + W + D + W D W+ G Sbjct: 1151 CFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRG 1199 >gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group] Length = 1509 Score = 73.9 bits (180), Expect = 2e-11 Identities = 39/109 (35%), Positives = 59/109 (54%) Frame = +2 Query: 17 KLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRDIRE 196 K+H ++ +K+ PKN GGLG + + N +LA+ WRL+ + D L S+VL KY + + Sbjct: 1036 KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGD 1095 Query: 197 LNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDG 343 K T SYT RS+ G +VL + W + D + W D W+ G Sbjct: 1096 CFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRG 1144 >sp|P0C2F6.1|RNHX1_ARATH RecName: Full=Putative ribonuclease H protein At1g65750 Length = 620 Score = 73.9 bits (180), Expect = 2e-11 Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 3/118 (2%) Frame = +2 Query: 14 RKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYR--D 187 +K H+V KVC PK GGLG++ K +N L+++ WRLL + LW+ VL KY + Sbjct: 82 KKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLVLQKKYHVGE 141 Query: 188 IRELNLDKTTRTTSYTCRSLVVGNKVL**H-LAWEIDDDNFARFWTDNWMGDGRLRNL 358 IR+ + S T RS+ +G + + H + W D RFWTD W+ L L Sbjct: 142 IRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWVSGKPLLEL 199 >gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 1505 Score = 73.9 bits (180), Expect = 2e-11 Identities = 39/109 (35%), Positives = 59/109 (54%) Frame = +2 Query: 17 KLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRDIRE 196 K+H ++ +K+ PKN GGLG + + N +LA+ WRL+ + D L S+VL KY + + Sbjct: 1032 KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGD 1091 Query: 197 LNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDG 343 K T SYT RS+ G +VL + W + D + W D W+ G Sbjct: 1092 CFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRVGDGSKINIWADPWIPRG 1140 >ref|XP_002438972.1| hypothetical protein SORBIDRAFT_10g029210 [Sorghum bicolor] gi|241917195|gb|EER90339.1| hypothetical protein SORBIDRAFT_10g029210 [Sorghum bicolor] Length = 240 Score = 73.6 bits (179), Expect = 3e-11 Identities = 43/116 (37%), Positives = 58/116 (50%) Frame = +2 Query: 5 DGPRKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYR 184 D K+H ++ +CR K GGLG + + N +LA+ AWRLL+ D L QVL KY Sbjct: 75 DNKNKMHWISWDTMCRRKEEGGLGFRDLHLFNLAMLARQAWRLLMTPDSLCGQVLKAKYY 134 Query: 185 DIRELNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDGRLR 352 L K SYT RS++ G K L L W + D N + W + W+ G R Sbjct: 135 RNCGLLDAKEAPGISYTWRSILRGIKALKDGLIWCVGDGNSIKIWLNPWIPRGVTR 190 >gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group] Length = 639 Score = 73.2 bits (178), Expect = 4e-11 Identities = 39/109 (35%), Positives = 59/109 (54%) Frame = +2 Query: 17 KLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRDIRE 196 K+H ++ +K+ PKN GGLG + + N +LA+ WRL+ + D L S+VL KY + + Sbjct: 31 KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGD 90 Query: 197 LNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDG 343 K T SYT RS+ G +VL + W + D + W D W+ G Sbjct: 91 CFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRG 139 >gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group] Length = 1594 Score = 73.2 bits (178), Expect = 4e-11 Identities = 39/109 (35%), Positives = 59/109 (54%) Frame = +2 Query: 17 KLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRDIRE 196 K+H ++ +K+ PKN GGLG + + N +LA+ WRL+ + D L S+VL KY + + Sbjct: 1064 KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGD 1123 Query: 197 LNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDG 343 K T SYT RS+ G +VL + W + D + W D W+ G Sbjct: 1124 CFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRG 1172 >gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group] Length = 561 Score = 73.2 bits (178), Expect = 4e-11 Identities = 39/109 (35%), Positives = 59/109 (54%) Frame = +2 Query: 17 KLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYRDIRE 196 K+H ++ +K+ PKN GGLG + + N +LA+ WRL+ + D L S+VL KY + + Sbjct: 31 KMHWLSWNKLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLRAKYFPLGD 90 Query: 197 LNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDG 343 K T SYT RS+ G +VL + W + D + W D W+ G Sbjct: 91 CFRPKQTSNVSYTWRSIQKGLRVLQNGMIWRMGDGSKINIWADPWIPRG 139 >gb|EAZ04413.1| hypothetical protein OsI_26557 [Oryza sativa Indica Group] Length = 374 Score = 73.2 bits (178), Expect = 4e-11 Identities = 42/116 (36%), Positives = 60/116 (51%) Frame = +2 Query: 5 DGPRKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYR 184 D K+H +A K+C +GGLG + + N +LA+ AWRLL N D L ++VL KY Sbjct: 75 DRENKMHWIAWDKLCSRTEKGGLGYRDLHLFNLAMLARQAWRLLSNLDSLCARVLKAKYF 134 Query: 185 DIRELNLDKTTRTTSYTCRSLVVGNKVL**HLAWEIDDDNFARFWTDNWMGDGRLR 352 +L + + SY+ RS+V G +VL L W + D W D W+ G R Sbjct: 135 PDGKLMEVRESPGISYSWRSIVRGVQVLKVGLIWRVGDSTDIDMWNDPWIPLGTTR 190 >gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1231 Score = 73.2 bits (178), Expect = 4e-11 Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 13/140 (9%) Frame = +2 Query: 14 RKLHIVA*HKVCRPKNRGGLGLKHMKEVNHVLLAQSAWRLLLNWDKLWSQVLSGKYR--D 187 +K H+++ K+C+PK GG+GL+ +++N L+A+ WRLL + + LW++V+ KY+ Sbjct: 697 KKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKYKVGG 756 Query: 188 IRELNLDKTTRTTSYTCRSLVVG-NKVL**HLAWEIDDDNFARFWTDNWMGDGRLRNLFL 364 +++ + K S T RS+ VG +V+ + W D RFW D W+ L Sbjct: 757 VQDTSWLKPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCTIRFWLDRWL---LQEPLVE 813 Query: 365 LGIDM----------EDHWL 394 LG DM D+WL Sbjct: 814 LGTDMIPEGERIKVAADYWL 833