BLASTX nr result
ID: Catharanthus22_contig00032095
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00032095
(431 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXB55387.1| DEAD-box ATP-dependent RNA helicase 35 [Morus not... 72 1e-19
ref|XP_006492096.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 2e-19
ref|XP_006427449.1| hypothetical protein CICLE_v10025231mg [Citr... 72 2e-19
gb|EPS62594.1| hypothetical protein M569_12195, partial [Genlise... 72 3e-19
ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 3e-19
ref|XP_004235903.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 4e-19
ref|XP_006341396.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 4e-19
ref|XP_006858127.1| hypothetical protein AMTR_s00062p00113470 [A... 70 5e-19
ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 6e-19
gb|EMJ16222.1| hypothetical protein PRUPE_ppa003295mg [Prunus pe... 70 6e-19
ref|XP_004303276.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 70 6e-19
ref|XP_006356229.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 1e-18
ref|XP_004241688.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 72 1e-18
ref|NP_199941.1| putative DEAD-box ATP-dependent RNA helicase 35... 72 1e-18
ref|XP_006389799.1| hypothetical protein EUTSA_v10018325mg [Eutr... 72 1e-18
ref|XP_006302054.1| hypothetical protein CARUB_v10020038mg [Caps... 72 1e-18
ref|XP_002888412.1| hypothetical protein ARALYDRAFT_315588 [Arab... 72 1e-18
ref|XP_002864104.1| hypothetical protein ARALYDRAFT_918160 [Arab... 72 1e-18
ref|XP_002328711.1| predicted protein [Populus trichocarpa] gi|5... 72 1e-18
ref|XP_002333939.1| predicted protein [Populus trichocarpa] 72 1e-18
>gb|EXB55387.1| DEAD-box ATP-dependent RNA helicase 35 [Morus notabilis]
Length = 432
Score = 71.6 bits (174), Expect(3) = 1e-19
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 330 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 370
Score = 44.7 bits (104), Expect(3) = 1e-19
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E VD+I +ASGVKGCA C GL ++
Sbjct: 372 LNDPMEDVDAITNASGVKGCAYCGGLGHR 400
Score = 25.4 bits (54), Expect(3) = 1e-19
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P ++ N IAS + Y SGGY GEI
Sbjct: 405 PKLAQQKNSAIASSRRDYFGSGGYRGEI 432
>ref|XP_006492096.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like isoform X1
[Citrus sinensis] gi|568878211|ref|XP_006492097.1|
PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like
isoform X2 [Citrus sinensis]
gi|568878213|ref|XP_006492098.1| PREDICTED: DEAD-box
ATP-dependent RNA helicase 35-like isoform X3 [Citrus
sinensis]
Length = 588
Score = 71.6 bits (174), Expect(3) = 2e-19
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 486 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 526
Score = 44.7 bits (104), Expect(3) = 2e-19
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E VD+I +ASGVKGCA C GL ++
Sbjct: 528 LNDPMEDVDAITNASGVKGCAYCGGLGHR 556
Score = 24.6 bits (52), Expect(3) = 2e-19
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ IAS + Y SGGY GEI
Sbjct: 561 PKLEHQKSMAIASSRRDYFGSGGYRGEI 588
>ref|XP_006427449.1| hypothetical protein CICLE_v10025231mg [Citrus clementina]
gi|557529439|gb|ESR40689.1| hypothetical protein
CICLE_v10025231mg [Citrus clementina]
Length = 588
Score = 71.6 bits (174), Expect(3) = 2e-19
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 486 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 526
Score = 44.7 bits (104), Expect(3) = 2e-19
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E VD+I +ASGVKGCA C GL ++
Sbjct: 528 LNDPMEDVDAITNASGVKGCAYCGGLGHR 556
Score = 24.6 bits (52), Expect(3) = 2e-19
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ IAS + Y SGGY GEI
Sbjct: 561 PKLEHQKSMAIASSRRDYFGSGGYRGEI 588
>gb|EPS62594.1| hypothetical protein M569_12195, partial [Genlisea aurea]
Length = 591
Score = 71.6 bits (174), Expect(3) = 3e-19
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 489 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 529
Score = 43.1 bits (100), Expect(3) = 3e-19
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP E V+ IA+ASGVKGCA C GL ++
Sbjct: 531 LNDPTEDVEEIANASGVKGCAYCGGLGHR 559
Score = 25.8 bits (55), Expect(3) = 3e-19
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++QIAS + Y SGGY GE+
Sbjct: 564 PKLEHQKSMQIASSRRDYFGSGGYRGEM 591
>ref|XP_002271334.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 35 isoform 1 [Vitis
vinifera] gi|147861063|emb|CAN78736.1| hypothetical
protein VITISV_003102 [Vitis vinifera]
gi|297743544|emb|CBI36411.3| unnamed protein product
[Vitis vinifera]
Length = 587
Score = 71.6 bits (174), Expect(3) = 3e-19
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 485 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 525
Score = 44.3 bits (103), Expect(3) = 3e-19
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E VD+I ASGVKGCA C GL ++
Sbjct: 527 LNDPMEDVDAITDASGVKGCAYCGGLGHR 555
Score = 24.6 bits (52), Expect(3) = 3e-19
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ IAS + Y SGGY GEI
Sbjct: 560 PKLEHQKSMAIASSRRDYFGSGGYRGEI 587
>ref|XP_004235903.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Solanum
lycopersicum]
Length = 595
Score = 71.6 bits (174), Expect(3) = 4e-19
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 493 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 533
Score = 42.0 bits (97), Expect(3) = 4e-19
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP++ V++I +ASGVKGCA C GL ++
Sbjct: 535 LNDPMDDVEAITNASGVKGCAYCGGLGHR 563
Score = 26.6 bits (57), Expect(3) = 4e-19
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++QIA+ + Y SGGY GEI
Sbjct: 568 PKLEHQKSVQIANSRRDYFGSGGYRGEI 595
>ref|XP_006341396.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Solanum
tuberosum]
Length = 589
Score = 71.6 bits (174), Expect(3) = 4e-19
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 487 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 527
Score = 42.0 bits (97), Expect(3) = 4e-19
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP++ V++I +ASGVKGCA C GL ++
Sbjct: 529 LNDPMDDVEAITNASGVKGCAYCGGLGHR 557
Score = 26.6 bits (57), Expect(3) = 4e-19
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++QIA+ + Y SGGY GEI
Sbjct: 562 PKLEHQKSVQIANSRRDYFGSGGYRGEI 589
>ref|XP_006858127.1| hypothetical protein AMTR_s00062p00113470 [Amborella trichopoda]
gi|548862230|gb|ERN19594.1| hypothetical protein
AMTR_s00062p00113470 [Amborella trichopoda]
Length = 593
Score = 70.5 bits (171), Expect(3) = 5e-19
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVL+
Sbjct: 491 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLS 531
Score = 45.8 bits (107), Expect(3) = 5e-19
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E VD+I SASGVKGCA C GL ++
Sbjct: 533 LNDPMEDVDAIVSASGVKGCAYCGGLGHR 561
Score = 23.5 bits (49), Expect(3) = 5e-19
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ IA + Y SGGY GEI
Sbjct: 566 PKLEHQKSMAIAGTRRDYFGSGGYGGEI 593
>ref|XP_004135864.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Cucumis
sativus]
Length = 597
Score = 71.6 bits (174), Expect(3) = 6e-19
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 495 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 535
Score = 43.1 bits (100), Expect(3) = 6e-19
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E V++I +ASGVKGCA C GL ++
Sbjct: 537 LNDPMEDVEAITNASGVKGCAYCGGLGHR 565
Score = 24.6 bits (52), Expect(3) = 6e-19
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ IAS + Y SGGY GEI
Sbjct: 570 PKLEHQKSMAIASSRRDYFGSGGYRGEI 597
>gb|EMJ16222.1| hypothetical protein PRUPE_ppa003295mg [Prunus persica]
Length = 587
Score = 70.5 bits (171), Expect(3) = 6e-19
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQ+ETTL DLKHLLQEAKQ IPPVLA
Sbjct: 485 GRCGKTGIATTFINKNQTETTLLDLKHLLQEAKQRIPPVLA 525
Score = 44.3 bits (103), Expect(3) = 6e-19
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E VD+I ASGVKGCA C GL ++
Sbjct: 527 LNDPMEDVDAITDASGVKGCAYCGGLGHR 555
Score = 24.6 bits (52), Expect(3) = 6e-19
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ IAS + Y SGGY GEI
Sbjct: 560 PKLEHQKSMAIASSRRDYFGSGGYRGEI 587
>ref|XP_004303276.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Fragaria
vesca subsp. vesca]
Length = 585
Score = 70.5 bits (171), Expect(3) = 6e-19
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLL+EAKQ IPPVLA
Sbjct: 483 GRCGKTGIATTFINKNQSETTLLDLKHLLEEAKQRIPPVLA 523
Score = 42.4 bits (98), Expect(3) = 6e-19
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E V+ I ASGVKGCA C GL ++
Sbjct: 525 LNDPMEDVEDITDASGVKGCAYCGGLGHR 553
Score = 26.6 bits (57), Expect(3) = 6e-19
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P +++ ++QI+S + Y SGGY GE+
Sbjct: 558 PKLEQQKSVQISSTRRDYYGSGGYRGEM 585
>ref|XP_006356229.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Solanum
tuberosum]
Length = 595
Score = 71.6 bits (174), Expect(3) = 1e-18
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 493 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 533
Score = 43.1 bits (100), Expect(3) = 1e-18
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP++ VD+I ASGVKGCA C GL ++
Sbjct: 535 LNDPMDDVDAITDASGVKGCAYCGGLGHR 563
Score = 23.9 bits (50), Expect(3) = 1e-18
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 184 QIASLTKYYVSSGGY*GEI 128
QIA+ + Y SGGY GEI
Sbjct: 577 QIANSRRDYFGSGGYRGEI 595
>ref|XP_004241688.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35-like [Solanum
lycopersicum]
Length = 595
Score = 71.6 bits (174), Expect(3) = 1e-18
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 493 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 533
Score = 43.1 bits (100), Expect(3) = 1e-18
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP++ VD+I ASGVKGCA C GL ++
Sbjct: 535 LNDPMDDVDAITDASGVKGCAYCGGLGHR 563
Score = 23.9 bits (50), Expect(3) = 1e-18
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2
Query: 184 QIASLTKYYVSSGGY*GEI 128
QIA+ + Y SGGY GEI
Sbjct: 577 QIANSRRDYFGSGGYRGEI 595
>ref|NP_199941.1| putative DEAD-box ATP-dependent RNA helicase 35 [Arabidopsis
thaliana] gi|75335491|sp|Q9LU46.1|RH35_ARATH RecName:
Full=DEAD-box ATP-dependent RNA helicase 35
gi|8843865|dbj|BAA97391.1| DEAD-box protein abstrakt
[Arabidopsis thaliana] gi|110740861|dbj|BAE98527.1|
DEAD-box protein abstrakt [Arabidopsis thaliana]
gi|332008678|gb|AED96061.1| putative DEAD-box
ATP-dependent RNA helicase 35 [Arabidopsis thaliana]
Length = 591
Score = 71.6 bits (174), Expect(3) = 1e-18
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 489 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 529
Score = 42.7 bits (99), Expect(3) = 1e-18
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E ++IA+ASGVKGCA C GL ++
Sbjct: 531 LNDPMEEAETIANASGVKGCAYCGGLGHR 559
Score = 24.3 bits (51), Expect(3) = 1e-18
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ I++ K Y SGGY GEI
Sbjct: 564 PKLEHQKSVAISNSRKDYFGSGGYRGEI 591
>ref|XP_006389799.1| hypothetical protein EUTSA_v10018325mg [Eutrema salsugineum]
gi|557086233|gb|ESQ27085.1| hypothetical protein
EUTSA_v10018325mg [Eutrema salsugineum]
Length = 587
Score = 71.6 bits (174), Expect(3) = 1e-18
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 485 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 525
Score = 42.7 bits (99), Expect(3) = 1e-18
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E ++IA+ASGVKGCA C GL ++
Sbjct: 527 LNDPMEEAETIANASGVKGCAYCGGLGHR 555
Score = 24.3 bits (51), Expect(3) = 1e-18
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ I++ K Y SGGY GEI
Sbjct: 560 PKLEHQKSVAISNSRKDYFGSGGYRGEI 587
>ref|XP_006302054.1| hypothetical protein CARUB_v10020038mg [Capsella rubella]
gi|482570764|gb|EOA34952.1| hypothetical protein
CARUB_v10020038mg [Capsella rubella]
Length = 587
Score = 71.6 bits (174), Expect(3) = 1e-18
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 485 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 525
Score = 42.7 bits (99), Expect(3) = 1e-18
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E ++IA+ASGVKGCA C GL ++
Sbjct: 527 LNDPMEEAETIANASGVKGCAYCGGLGHR 555
Score = 24.3 bits (51), Expect(3) = 1e-18
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ I++ K Y SGGY GEI
Sbjct: 560 PKLEHQKSVAISNSRKDYFGSGGYRGEI 587
>ref|XP_002888412.1| hypothetical protein ARALYDRAFT_315588 [Arabidopsis lyrata subsp.
lyrata] gi|297334253|gb|EFH64671.1| hypothetical protein
ARALYDRAFT_315588 [Arabidopsis lyrata subsp. lyrata]
Length = 587
Score = 71.6 bits (174), Expect(3) = 1e-18
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 485 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 525
Score = 42.7 bits (99), Expect(3) = 1e-18
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E ++IA+ASGVKGCA C GL ++
Sbjct: 527 LNDPMEEAETIANASGVKGCAYCGGLGHR 555
Score = 24.3 bits (51), Expect(3) = 1e-18
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ I++ K Y SGGY GEI
Sbjct: 560 PKLEHQKSVAISNSRKDYFGSGGYRGEI 587
>ref|XP_002864104.1| hypothetical protein ARALYDRAFT_918160 [Arabidopsis lyrata subsp.
lyrata] gi|297309939|gb|EFH40363.1| hypothetical protein
ARALYDRAFT_918160 [Arabidopsis lyrata subsp. lyrata]
Length = 587
Score = 71.6 bits (174), Expect(3) = 1e-18
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 485 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 525
Score = 42.7 bits (99), Expect(3) = 1e-18
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E ++IA+ASGVKGCA C GL ++
Sbjct: 527 LNDPMEEAETIANASGVKGCAYCGGLGHR 555
Score = 24.3 bits (51), Expect(3) = 1e-18
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + ++ I++ K Y SGGY GEI
Sbjct: 560 PKLEHQKSVAISNSRKDYFGSGGYRGEI 587
>ref|XP_002328711.1| predicted protein [Populus trichocarpa]
gi|566168218|ref|XP_006385035.1| DEAD-box protein
abstrakt [Populus trichocarpa]
gi|550341803|gb|ERP62832.1| DEAD-box protein abstrakt
[Populus trichocarpa]
Length = 587
Score = 71.6 bits (174), Expect(3) = 1e-18
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 485 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 525
Score = 43.1 bits (100), Expect(3) = 1e-18
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E D+I SASGVKGCA C GL ++
Sbjct: 527 LNDPMEDGDTITSASGVKGCAYCGGLGHR 555
Score = 23.5 bits (49), Expect(3) = 1e-18
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + + Q+A+ + Y SGGY GEI
Sbjct: 560 PKLEHQRSQQLANSRRDYFGSGGYRGEI 587
>ref|XP_002333939.1| predicted protein [Populus trichocarpa]
Length = 238
Score = 71.6 bits (174), Expect(3) = 1e-18
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = -1
Query: 431 GRCGRIDVATTSINKNQSETTLFDLKHLLQEAKQMIPPVLA 309
GRCG+ +ATT INKNQSETTL DLKHLLQEAKQ IPPVLA
Sbjct: 136 GRCGKTGIATTFINKNQSETTLLDLKHLLQEAKQRIPPVLA 176
Score = 43.1 bits (100), Expect(3) = 1e-18
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = -3
Query: 306 LNDPLEGVDSIASASGVKGCANCVGLSYQ 220
LNDP+E D+I SASGVKGCA C GL ++
Sbjct: 178 LNDPMEDGDTITSASGVKGCAYCGGLGHR 206
Score = 23.5 bits (49), Expect(3) = 1e-18
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 211 PSGKKEGNIQIASLTKYYVSSGGY*GEI 128
P + + + Q+A+ + Y SGGY GEI
Sbjct: 211 PKLEHQRSQQLANSRRDYFGSGGYRGEI 238