BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00031573
         (270 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    57   3e-06
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   1e-05

>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
 Frame = +1

Query: 88  FFERGL---SRSQCLFNFINFVDSPELVSQF*PITLCNILMKVVTKVIANRLKPILGKLI 258
           FFE G+   S +  L   I  V  PE + QF P++LCN+L K++TK++  RLK ++ KLI
Sbjct: 338 FFETGVLPASTNDALLVLIAKVAKPERIQQFRPVSLCNVLFKIITKMMVTRLKNVISKLI 397

Query: 259 GSTQ 270
           G  Q
Sbjct: 398 GPAQ 401


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 27/43 (62%), Positives = 31/43 (72%)
 Frame = +1

Query: 142 VDSPELVSQF*PITLCNILMKVVTKVIANRLKPILGKLIGSTQ 270
           +D P+L   F PI LCNI+ K+VTKVI NRLKPIL  LI  TQ
Sbjct: 502 MDIPQLAKHFRPIGLCNIVYKIVTKVIINRLKPILPSLISPTQ 544