BLASTX nr result
ID: Catharanthus22_contig00031476
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00031476
(337 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 80 3e-30
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 80 7e-30
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 79 2e-29
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 82 3e-29
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 82 3e-29
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic... 78 3e-29
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 82 3e-29
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 82 3e-29
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 82 6e-29
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group] 82 8e-29
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 79 1e-28
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 79 1e-28
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 79 1e-28
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 78 1e-28
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc... 81 2e-28
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 81 2e-28
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group] 81 2e-28
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group] 82 2e-28
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 77 2e-28
gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subc... 82 2e-28
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 80.1 bits (196), Expect(2) = 3e-30
Identities = 39/65 (60%), Positives = 49/65 (75%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S +EPP+FK RLV K FS + G+D+N +FSPVVK+ +IR +IVA +DLELEQLD
Sbjct: 859 KEGLSPSEPPRFKARLVAKGFSQIVGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLD 918
Query: 156 VKLHF 142
VK F
Sbjct: 919 VKTAF 923
Score = 77.4 bits (189), Expect(2) = 3e-30
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE C LK+SLY +K+SPRQWYKRF
Sbjct: 920 KTAFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRF 970
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 80.5 bits (197), Expect(2) = 7e-30
Identities = 39/65 (60%), Positives = 49/65 (75%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S +EPP+FKVRLV K FS + G+D+N +FSPVVK+ +IR +IV +DLELEQLD
Sbjct: 859 KEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLD 918
Query: 156 VKLHF 142
VK F
Sbjct: 919 VKTTF 923
Score = 75.9 bits (185), Expect(2) = 7e-30
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+T FLHGELEE IYM QP F V GKE C LK+SLY +K+SPRQWYKRF
Sbjct: 920 KTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRF 970
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 79.3 bits (194), Expect(2) = 2e-29
Identities = 38/65 (58%), Positives = 49/65 (75%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S +EPP+FK +LV K FS + G+D+N +FSPVVK+ +IR +IVA +DLELEQLD
Sbjct: 543 KEGLSPSEPPRFKAKLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLD 602
Query: 156 VKLHF 142
VK F
Sbjct: 603 VKTAF 607
Score = 75.5 bits (184), Expect(2) = 2e-29
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE C LK+S Y +K+SPRQWYKRF
Sbjct: 604 KTAFLHGELEEEIYMDQPEGFIVPGKEGYVCKLKRSFYGLKQSPRQWYKRF 654
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 81.6 bits (200), Expect(2) = 3e-29
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE++ C LKKSLY +K+SPRQWYKRF
Sbjct: 856 KTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRF 906
Score = 72.8 bits (177), Expect(2) = 3e-29
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S ++ ++K RLV K +S + GIDFN IFSPVVK+ +IR +L+IVA +D ELEQ+D
Sbjct: 795 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMD 854
Query: 156 VKLHF 142
VK F
Sbjct: 855 VKTAF 859
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 81.6 bits (200), Expect(2) = 3e-29
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE++ C LKKSLY +K+SPRQWYKRF
Sbjct: 688 KTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRF 738
Score = 72.8 bits (177), Expect(2) = 3e-29
Identities = 36/65 (55%), Positives = 48/65 (73%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S ++ ++K RLV K +S + GIDFN IFSPVVK+ +IR +L+IVA +D ELEQ+D
Sbjct: 627 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDIFSPVVKHSSIRTLLSIVAMHDYELEQMD 686
Query: 156 VKLHF 142
VK F
Sbjct: 687 VKTAF 691
>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
Length = 624
Score = 78.2 bits (191), Expect(2) = 3e-29
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM Q F GKEH+ C LKKSLY +K++PRQWYKRF
Sbjct: 279 KTAFLHGELEEEIYMEQSDGFIAPGKEHLVCRLKKSLYGLKQAPRQWYKRF 329
Score = 76.3 bits (186), Expect(2) = 3e-29
Identities = 39/65 (60%), Positives = 48/65 (73%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE E P+ K RLV K F+ EGIDFN+IFSPVV++ +IR++LA VA +DLELEQLD
Sbjct: 218 KEGIPGVENPRCKARLVVKGFNQKEGIDFNEIFSPVVRHTSIRVLLAFVALFDLELEQLD 277
Query: 156 VKLHF 142
VK F
Sbjct: 278 VKTAF 282
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 81.6 bits (200), Expect(2) = 3e-29
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE++ C LKKSLY +K+SPRQWYKRF
Sbjct: 1137 KTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRF 1187
Score = 72.4 bits (176), Expect(2) = 3e-29
Identities = 34/65 (52%), Positives = 49/65 (75%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S+++ ++K RL+ K +S + GIDFN +FSPVVK+ +IR +L+IVA +D ELEQ+D
Sbjct: 1076 KEGISSSDEARYKARLIAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMD 1135
Query: 156 VKLHF 142
VK F
Sbjct: 1136 VKTAF 1140
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 81.6 bits (200), Expect(2) = 3e-29
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE++ C LKKSLY +K+SPRQWYKRF
Sbjct: 839 KTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRF 889
Score = 72.4 bits (176), Expect(2) = 3e-29
Identities = 35/65 (53%), Positives = 48/65 (73%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S ++ ++K RLV K +S + GIDFN +FSPVVK+ +IR +L+IVA +D ELEQ+D
Sbjct: 778 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMD 837
Query: 156 VKLHF 142
VK F
Sbjct: 838 VKTAF 842
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 81.6 bits (200), Expect(2) = 6e-29
Identities = 38/65 (58%), Positives = 54/65 (83%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
K+ S +EPP++K RLV K FS EGID+N++FSPVVK+K+IR++LA+V+ ++LEL+QLD
Sbjct: 967 KDGISXDEPPKYKSRLVAKGFSQKEGIDYNEVFSPVVKHKSIRVLLAMVSVFNLELDQLD 1026
Query: 156 VKLHF 142
VK F
Sbjct: 1027 VKTAF 1031
Score = 71.6 bits (174), Expect(2) = 6e-29
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHG LEE IYM+QP F K C LKKSLY +K+SPRQWYKRF
Sbjct: 1028 KTAFLHGNLEEEIYMKQPEGFVDSEKSDHVCFLKKSLYGLKQSPRQWYKRF 1078
>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
Length = 621
Score = 81.6 bits (200), Expect(2) = 8e-29
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE++ C LKKSLY +K+SPRQWYKRF
Sbjct: 316 KTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRF 366
Score = 71.2 bits (173), Expect(2) = 8e-29
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S ++ +K RLV K +S + GIDFN +FSPVVK+ +IR +L+IVA +D ELEQ+D
Sbjct: 255 KECISPSDEAMYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMD 314
Query: 156 VKLHF 142
VK F
Sbjct: 315 VKTAF 319
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 78.6 bits (192), Expect(2) = 1e-28
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S++EPP++K RLV + +S + G+D+N +FSPVVK+ +IR L+IVA +DLELEQLD
Sbjct: 870 KEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLD 929
Query: 156 VKLHF 142
VK F
Sbjct: 930 VKTAF 934
Score = 73.9 bits (180), Expect(2) = 1e-28
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE C LK+SLY +K+SPRQW KRF
Sbjct: 931 KTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRF 981
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 78.6 bits (192), Expect(2) = 1e-28
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S++EPP++K RLV + +S + G+D+N +FSPVVK+ +IR L+IVA +DLELEQLD
Sbjct: 870 KEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLD 929
Query: 156 VKLHF 142
VK F
Sbjct: 930 VKTAF 934
Score = 73.9 bits (180), Expect(2) = 1e-28
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE C LK+SLY +K+SPRQW KRF
Sbjct: 931 KTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRF 981
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 78.6 bits (192), Expect(2) = 1e-28
Identities = 37/65 (56%), Positives = 51/65 (78%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S++EPP++K RLV + +S + G+D+N +FSPVVK+ +IR L+IVA +DLELEQLD
Sbjct: 870 KEGLSSSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLD 929
Query: 156 VKLHF 142
VK F
Sbjct: 930 VKTAF 934
Score = 73.9 bits (180), Expect(2) = 1e-28
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE C LK+SLY +K+SPRQW KRF
Sbjct: 931 KTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRF 981
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 78.2 bits (191), Expect(2) = 1e-28
Identities = 37/65 (56%), Positives = 50/65 (76%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S +EPP++K RLV + +S + G+D+N +FSPVVK+ +IR L+IVA +DLELEQLD
Sbjct: 872 KEALSLSEPPKYKARLVARGYSQIPGVDYNDVFSPVVKHSSIRTFLSIVASHDLELEQLD 931
Query: 156 VKLHF 142
VK F
Sbjct: 932 VKTAF 936
Score = 73.9 bits (180), Expect(2) = 1e-28
Identities = 35/51 (68%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE C LK+SLY +K+SPRQW KRF
Sbjct: 933 KTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSPRQWNKRF 983
>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1312
Score = 81.3 bits (199), Expect(2) = 2e-28
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE++ C LKKSLY +K+SPRQWYKRF
Sbjct: 965 KTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRF 1015
Score = 70.5 bits (171), Expect(2) = 2e-28
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S ++ ++K RLV K +S + GIDFN +FSP++K+ +IR +L IVA +D ELEQ+D
Sbjct: 904 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMD 963
Query: 156 VKLHF 142
VK F
Sbjct: 964 VKTAF 968
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 81.3 bits (199), Expect(2) = 2e-28
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F+V GKE+ C LKKSLY +K+SPRQWYKRF
Sbjct: 905 KTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQSPRQWYKRF 955
Score = 70.5 bits (171), Expect(2) = 2e-28
Identities = 35/65 (53%), Positives = 49/65 (75%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S E ++K R+V + F+ EG+D+N+IFSPVV++ +IR++LAIVA +LELEQLD
Sbjct: 844 KEGISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSIRVLLAIVAHQNLELEQLD 903
Query: 156 VKLHF 142
VK F
Sbjct: 904 VKTAF 908
>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1280
Score = 81.3 bits (199), Expect(2) = 2e-28
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE++ C LKKSLY +K+SPRQWYKRF
Sbjct: 965 KTAFLHGELEEDIYMEQPEGFVVLGKENLVCRLKKSLYGLKQSPRQWYKRF 1015
Score = 70.5 bits (171), Expect(2) = 2e-28
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S ++ ++K RLV K +S + GIDFN +FSP++K+ +IR +L IVA +D ELEQ+D
Sbjct: 904 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPIMKHSSIRTLLGIVAMHDYELEQMD 963
Query: 156 VKLHF 142
VK F
Sbjct: 964 VKTAF 968
>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1243
Score = 81.6 bits (200), Expect(2) = 2e-28
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE++ C LKKSLY +K+SPRQWYKRF
Sbjct: 902 KTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRF 952
Score = 70.1 bits (170), Expect(2) = 2e-28
Identities = 34/65 (52%), Positives = 47/65 (72%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S ++ ++K RLV K +S + GIDFN +FSPVVK+ +IR +L IVA +D ELEQ++
Sbjct: 841 KEGMSPSDEARYKARLVAKGYSQIPGIDFNDVFSPVVKHSSIRTLLGIVAMHDYELEQMN 900
Query: 156 VKLHF 142
VK F
Sbjct: 901 VKTAF 905
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 77.0 bits (188), Expect(2) = 2e-28
Identities = 38/65 (58%), Positives = 48/65 (73%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S +EPP+FK RLV K FS + G+D+N +FSPVVK+ +IR +IVA DLEL+QLD
Sbjct: 192 KEGLSPSEPPRFKARLVAKGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMDDLELKQLD 251
Query: 156 VKLHF 142
VK F
Sbjct: 252 VKTTF 256
Score = 74.7 bits (182), Expect(2) = 2e-28
Identities = 34/51 (66%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+T FLHGELE+ IYM QP F V GKE C LK+SLY +K+SPRQWYKRF
Sbjct: 253 KTTFLHGELEDEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPRQWYKRF 303
>gb|ABA99474.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 983
Score = 81.6 bits (200), Expect(2) = 2e-28
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = -1
Query: 154 ETAFLHGELEETIYMRQPPDFEVKGKEHMTCLLKKSLYEVKKSPRQWYKRF 2
+TAFLHGELEE IYM QP F V GKE++ C LKKSLY +K+SPRQWYKRF
Sbjct: 672 KTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQSPRQWYKRF 722
Score = 69.7 bits (169), Expect(2) = 2e-28
Identities = 33/65 (50%), Positives = 47/65 (72%)
Frame = -2
Query: 336 KEPESANEPPQFKVRLVTKSFS*MEGIDFNKIFSPVVKYKTIRIILAIVAFYDLELEQLD 157
KE S ++ ++K RLV K +S + IDFN +FSP+VK+ +IR +L+IVA +D ELEQ+D
Sbjct: 611 KEGMSPSDEARYKARLVAKGYSQIPSIDFNDVFSPIVKHSSIRTLLSIVAMHDYELEQMD 670
Query: 156 VKLHF 142
VK F
Sbjct: 671 VKTAF 675