BLASTX nr result

ID: Catharanthus22_contig00031411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00031411
         (563 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago trunc...   108   9e-22
ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago ...   105   6e-21
emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]    61   2e-07
ref|XP_002523276.1| conserved hypothetical protein [Ricinus comm...    59   1e-06

>ref|XP_003628497.1| NADH dehydrogenase subunit F [Medicago truncatula]
           gi|355522519|gb|AET02973.1| NADH dehydrogenase subunit F
           [Medicago truncatula]
          Length = 187

 Score =  108 bits (270), Expect = 9e-22
 Identities = 54/58 (93%), Positives = 54/58 (93%), Gaps = 1/58 (1%)
 Frame = -2

Query: 562 TPPVLARSGPWSSVSGLPADKISEIDQPAGLVWLFFSIE-KESAVCASHLLLGSAGRH 392
           TPPVL RSGPWSSVSG PADKISEIDQPAGLVWLF SIE KESAVCASHLLLGSAGRH
Sbjct: 24  TPPVLIRSGPWSSVSGFPADKISEIDQPAGLVWLFLSIEKKESAVCASHLLLGSAGRH 81


>ref|XP_003588284.1| hypothetical protein MTR_1g005250 [Medicago truncatula]
           gi|355477332|gb|AES58535.1| hypothetical protein
           MTR_1g005250 [Medicago truncatula]
          Length = 197

 Score =  105 bits (263), Expect = 6e-21
 Identities = 64/111 (57%), Positives = 70/111 (63%), Gaps = 3/111 (2%)
 Frame = -2

Query: 562 TPPVLARSGPWSSVSGLPADKISEIDQPAGLVWLFFSIE-KESAVCASHLLLGSAGRHGI 386
           TPPVL RSGPWSSVSGLPADKISEIDQPAGLVWLF SIE KESAVC              
Sbjct: 42  TPPVLIRSGPWSSVSGLPADKISEIDQPAGLVWLFLSIEKKESAVC-------------- 87

Query: 385 FVQI*AGRTCDGSQGSNMTT*VYVATILFY--ESGRLFRSSARFFGVVGEG 239
                AGRTCDGS  SN+   + +    ++  E+G L      FFGVVGEG
Sbjct: 88  -----AGRTCDGSPRSNIYDHLGLRCHDYFSMEAGGLLEVRPGFFGVVGEG 133


>emb|CAN61461.1| hypothetical protein VITISV_029800 [Vitis vinifera]
          Length = 124

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = -2

Query: 562 TPPVLARSGPWSSVSGLPADKISEIDQPAGL 470
           TPPVL RSG WSSVSGLPADKISEIDQPAGL
Sbjct: 38  TPPVLVRSGLWSSVSGLPADKISEIDQPAGL 68


>ref|XP_002523276.1| conserved hypothetical protein [Ricinus communis]
           gi|223537489|gb|EEF39115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 136

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/41 (68%), Positives = 31/41 (75%)
 Frame = +3

Query: 441 SFSIEKNSQTNPAGWSISEILSAGKPETDDHGPDLASTGGV 563
           SF  E+NSQT P  WSIS+ILS GK ETD+ GPDL ST GV
Sbjct: 84  SFEAERNSQTKPVVWSISKILSIGKLETDNQGPDLTSTRGV 124


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