BLASTX nr result
ID: Catharanthus22_contig00031390
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00031390
(818 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16383.3| unnamed protein product [Vitis vinifera] 64 6e-08
ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnm... 64 6e-08
ref|XP_006358437.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 63 1e-07
ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 63 1e-07
ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-m... 62 2e-07
ref|XP_004247484.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 61 4e-07
gb|ESW04011.1| hypothetical protein PHAVU_011G059600g [Phaseolus... 61 5e-07
ref|XP_006470603.1| PREDICTED: mitochondrial tRNA-specific 2-thi... 60 7e-07
gb|EMJ11091.1| hypothetical protein PRUPE_ppa004048mg [Prunus pe... 60 7e-07
ref|XP_003539065.2| PREDICTED: mitochondrial tRNA-specific 2-thi... 60 1e-06
gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis] 59 2e-06
ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase Mnm... 59 2e-06
ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Popu... 59 2e-06
gb|EPS60248.1| hypothetical protein M569_14556 [Genlisea aurea] 59 2e-06
ref|XP_006850208.1| hypothetical protein AMTR_s00022p00251260 [A... 58 5e-06
gb|EMT11416.1| tRNA-specific 2-thiouridylase mnmA [Aegilops taus... 58 5e-06
ref|XP_003558694.1| PREDICTED: tRNA-specific 2-thiouridylase mnm... 58 5e-06
dbj|BAK01046.1| predicted protein [Hordeum vulgare subsp. vulgare] 58 5e-06
gb|EEE58416.1| hypothetical protein OsJ_09614 [Oryza sativa Japo... 58 5e-06
gb|EEC74610.1| hypothetical protein OsI_10221 [Oryza sativa Indi... 58 5e-06
>emb|CBI16383.3| unnamed protein product [Vitis vinifera]
Length = 544
Score = 63.9 bits (154), Expect = 6e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPWEDDLKYAKAVCDQV V ++
Sbjct: 125 EDFENFWSECPWEDDLKYAKAVCDQVDVPLEV 156
>ref|XP_002282827.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Vitis vinifera]
Length = 540
Score = 63.9 bits (154), Expect = 6e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPWEDDLKYAKAVCDQV V ++
Sbjct: 121 EDFENFWSECPWEDDLKYAKAVCDQVDVPLEV 152
>ref|XP_006358437.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Solanum tuberosum]
Length = 488
Score = 62.8 bits (151), Expect = 1e-07
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+N+WSECPWEDDLKYAKAVCDQV V ++
Sbjct: 121 EDFENYWSECPWEDDLKYAKAVCDQVDVPLEV 152
>ref|XP_004142116.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cucumis
sativus] gi|449524848|ref|XP_004169433.1| PREDICTED:
tRNA-specific 2-thiouridylase MnmA-like [Cucumis
sativus]
Length = 538
Score = 62.8 bits (151), Expect = 1e-07
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPW+DDLKYAKAVCDQV V ++
Sbjct: 119 EDFENFWSECPWDDDLKYAKAVCDQVDVPLEV 150
>ref|XP_002513510.1| tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative [Ricinus communis] gi|223547418|gb|EEF48913.1|
tRNA
(5-methylaminomethyl-2-thiouridylate)-methyltransferase,
putative [Ricinus communis]
Length = 497
Score = 62.0 bits (149), Expect = 2e-07
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPWE+DLKYAKAVCDQV + ++
Sbjct: 108 EDFENFWSECPWEEDLKYAKAVCDQVDIPLEV 139
>ref|XP_004247484.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Solanum
lycopersicum]
Length = 489
Score = 61.2 bits (147), Expect = 4e-07
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+N+WSECPWEDDLKYAK VCDQV V ++
Sbjct: 117 EDFENYWSECPWEDDLKYAKGVCDQVDVPLEV 148
>gb|ESW04011.1| hypothetical protein PHAVU_011G059600g [Phaseolus vulgaris]
Length = 488
Score = 60.8 bits (146), Expect = 5e-07
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPWE+DLKYAKAVC+QV V ++
Sbjct: 111 EDFENFWSECPWEEDLKYAKAVCEQVDVPLEV 142
>ref|XP_006470603.1| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
[Citrus sinensis]
Length = 525
Score = 60.5 bits (145), Expect = 7e-07
Identities = 23/32 (71%), Positives = 29/32 (90%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFW+ECPWE+D+KYAKAVCDQV V ++
Sbjct: 107 EDFENFWTECPWEEDMKYAKAVCDQVDVPLEV 138
>gb|EMJ11091.1| hypothetical protein PRUPE_ppa004048mg [Prunus persica]
Length = 533
Score = 60.5 bits (145), Expect = 7e-07
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPWE+DLKYAKAVC+QV V ++
Sbjct: 118 EDFENFWSECPWEEDLKYAKAVCNQVDVPLEV 149
>ref|XP_003539065.2| PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1-like
isoform X1 [Glycine max]
Length = 502
Score = 59.7 bits (143), Expect = 1e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPWEDDLKYAK VC+QV V ++
Sbjct: 113 EDFENFWSECPWEDDLKYAKDVCNQVDVPLEV 144
>gb|EXB93298.1| tRNA-specific 2-thiouridylase mnmA [Morus notabilis]
Length = 580
Score = 59.3 bits (142), Expect = 2e-06
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPWE+DLKYAKAVC Q+ V ++
Sbjct: 167 EDFENFWSECPWEEDLKYAKAVCSQIEVPLEV 198
>ref|XP_004507093.1| PREDICTED: tRNA-specific 2-thiouridylase MnmA-like [Cicer
arietinum]
Length = 484
Score = 59.3 bits (142), Expect = 2e-06
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPWEDDLKYAK VC+QV V ++
Sbjct: 106 EDFENFWSECPWEDDLKYAKDVCNQVEVPLEV 137
>ref|XP_002298404.2| hypothetical protein POPTR_0001s26620g [Populus trichocarpa]
gi|550348245|gb|EEE83209.2| hypothetical protein
POPTR_0001s26620g [Populus trichocarpa]
Length = 512
Score = 58.9 bits (141), Expect = 2e-06
Identities = 23/32 (71%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWSECPWE+DLK+AK VCDQV V ++
Sbjct: 123 EDFNNFWSECPWEEDLKFAKGVCDQVGVPLEV 154
>gb|EPS60248.1| hypothetical protein M569_14556 [Genlisea aurea]
Length = 263
Score = 58.9 bits (141), Expect = 2e-06
Identities = 25/41 (60%), Positives = 33/41 (80%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDLFSMIYSSDY 696
EDF+NFWSECPWE+D+KYAKAVC QV V ++ + +S+Y
Sbjct: 92 EDFENFWSECPWEEDMKYAKAVCAQVNVPLEVVHL--TSEY 130
>ref|XP_006850208.1| hypothetical protein AMTR_s00022p00251260 [Amborella trichopoda]
gi|548853806|gb|ERN11789.1| hypothetical protein
AMTR_s00022p00251260 [Amborella trichopoda]
Length = 565
Score = 57.8 bits (138), Expect = 5e-06
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF+NFWS CPW++DLKYAKAVCD+V V ++
Sbjct: 161 EDFENFWSACPWDEDLKYAKAVCDEVHVPLEV 192
>gb|EMT11416.1| tRNA-specific 2-thiouridylase mnmA [Aegilops tauschii]
Length = 552
Score = 57.8 bits (138), Expect = 5e-06
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF NFWSECPW+DDLKYA+AVCD++ V ++
Sbjct: 112 EDFRNFWSECPWDDDLKYAQAVCDKIDVPLEV 143
>ref|XP_003558694.1| PREDICTED: tRNA-specific 2-thiouridylase mnmA-like [Brachypodium
distachyon]
Length = 481
Score = 57.8 bits (138), Expect = 5e-06
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF NFWSECPW+DDLKYA+AVCD++ V ++
Sbjct: 108 EDFRNFWSECPWDDDLKYAQAVCDKIDVPLEV 139
>dbj|BAK01046.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 491
Score = 57.8 bits (138), Expect = 5e-06
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF NFWSECPW+DDLKYA+AVCD++ V ++
Sbjct: 112 EDFRNFWSECPWDDDLKYAQAVCDKIDVPLEV 143
>gb|EEE58416.1| hypothetical protein OsJ_09614 [Oryza sativa Japonica Group]
Length = 410
Score = 57.8 bits (138), Expect = 5e-06
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF NFWSECPW+DDLKYA+AVCD++ V ++
Sbjct: 115 EDFRNFWSECPWDDDLKYAQAVCDKIDVPLEV 146
>gb|EEC74610.1| hypothetical protein OsI_10221 [Oryza sativa Indica Group]
Length = 488
Score = 57.8 bits (138), Expect = 5e-06
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = -1
Query: 818 EDFDNFWSECPWEDDLKYAKAVCDQVCVVFDL 723
EDF NFWSECPW+DDLKYA+AVCD++ V ++
Sbjct: 115 EDFRNFWSECPWDDDLKYAQAVCDKIDVPLEV 146