BLASTX nr result
ID: Catharanthus22_contig00031388
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00031388
(338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containi... 144 2e-32
emb|CBI38358.3| unnamed protein product [Vitis vinifera] 144 2e-32
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera] 144 2e-32
gb|EMJ04885.1| hypothetical protein PRUPE_ppa026192mg [Prunus pe... 138 9e-31
ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi... 132 5e-29
ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containi... 130 2e-28
gb|ESW28860.1| hypothetical protein PHAVU_002G024100g [Phaseolus... 128 9e-28
ref|XP_003611862.1| Pentatricopeptide repeat-containing protein ... 127 1e-27
gb|EXB96697.1| hypothetical protein L484_011738 [Morus notabilis] 127 2e-27
ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea ma... 112 5e-23
ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [S... 109 3e-22
ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containi... 108 7e-22
gb|EMT03504.1| Pentatricopeptide repeat-containing protein [Aegi... 105 5e-21
dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare] 105 5e-21
ref|XP_004959653.1| PREDICTED: pentatricopeptide repeat-containi... 102 7e-20
ref|XP_002300388.2| hypothetical protein POPTR_0001s37860g [Popu... 100 3e-19
ref|XP_006474838.1| PREDICTED: pentatricopeptide repeat-containi... 99 4e-19
ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
gb|EMJ08282.1| hypothetical protein PRUPE_ppa024338mg, partial [... 99 6e-19
ref|XP_006452639.1| hypothetical protein CICLE_v10010822mg [Citr... 99 8e-19
>ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 616
Score = 144 bits (362), Expect = 2e-32
Identities = 68/101 (67%), Positives = 86/101 (85%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH N+ KQILKQLLEL +SGGLYVL+SNI+ EAQRWED+KK+R+LM++ GIKK A
Sbjct: 501 RIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRA 560
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEG 305
+SSIEI+GCI+EF+VDDK H+ S+SIY +LD+L DHL+S G
Sbjct: 561 ISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAG 601
>emb|CBI38358.3| unnamed protein product [Vitis vinifera]
Length = 549
Score = 144 bits (362), Expect = 2e-32
Identities = 68/101 (67%), Positives = 86/101 (85%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH N+ KQILKQLLEL +SGGLYVL+SNI+ EAQRWED+KK+R+LM++ GIKK A
Sbjct: 434 RIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRA 493
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEG 305
+SSIEI+GCI+EF+VDDK H+ S+SIY +LD+L DHL+S G
Sbjct: 494 ISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAG 534
>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
Length = 688
Score = 144 bits (362), Expect = 2e-32
Identities = 68/101 (67%), Positives = 86/101 (85%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH N+ KQILKQLLEL +SGGLYVL+SNI+ EAQRWED+KK+R+LM++ GIKK A
Sbjct: 573 RIHGNVEIGKQILKQLLELEPHSGGLYVLISNIYWEAQRWEDVKKIRKLMIDRGIKKGRA 632
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEG 305
+SSIEI+GCI+EF+VDDK H+ S+SIY +LD+L DHL+S G
Sbjct: 633 ISSIEIDGCIYEFMVDDKRHKISSSIYAMLDQLTDHLRSAG 673
>gb|EMJ04885.1| hypothetical protein PRUPE_ppa026192mg [Prunus persica]
Length = 559
Score = 138 bits (347), Expect = 9e-31
Identities = 68/111 (61%), Positives = 87/111 (78%), Gaps = 1/111 (0%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH N+ KQILKQLLEL + GLYVL+SNIF EA RWED+KK+R+L+ + G+ K A
Sbjct: 447 RIHGNVDLGKQILKQLLELEGHGSGLYVLLSNIFGEAHRWEDVKKIRKLIKDGGVIKSRA 506
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEGLS-TLLLDVE 332
VSSIEI+GC++EF+VDDK HE S+SIY +LD+L DHLKS G + + LD+E
Sbjct: 507 VSSIEIDGCVYEFMVDDKRHETSSSIYSMLDQLTDHLKSTGYAPSAFLDIE 557
>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Glycine max]
Length = 667
Score = 132 bits (332), Expect = 5e-29
Identities = 63/110 (57%), Positives = 85/110 (77%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RI+ N+ AKQI+KQLLEL ++ GLYVL+SN++ E+QRW+DMKK+R++M + GIKK A
Sbjct: 550 RIYGNLEIAKQIMKQLLELGRFNSGLYVLLSNMYSESQRWDDMKKIRKIMDDSGIKKCRA 609
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEGLSTLLLDVE 332
+S IEI+GC ++F+VDDK H AS IY +LD+LMDHLKS G +VE
Sbjct: 610 ISFIEIDGCCYQFMVDDKRHCASTGIYSILDQLMDHLKSVGYPCKSSEVE 659
>ref|XP_004301874.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Fragaria vesca subsp. vesca]
Length = 655
Score = 130 bits (327), Expect = 2e-28
Identities = 64/111 (57%), Positives = 85/111 (76%), Gaps = 1/111 (0%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH N+ AK ILKQLLEL ++ GLYVL++NIF EA RWED+K +R+L+ + G+ K+ A
Sbjct: 543 RIHGNVDLAKLILKQLLELELHGSGLYVLLANIFGEAHRWEDVKNIRKLIKDGGVIKNRA 602
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEGLS-TLLLDVE 332
VSSIEI+GC++EF+VDD H S+SIY +LD+L DHLKS + T L D+E
Sbjct: 603 VSSIEIDGCVYEFMVDDNRHALSSSIYSILDQLTDHLKSLRYNPTALFDIE 653
>gb|ESW28860.1| hypothetical protein PHAVU_002G024100g [Phaseolus vulgaris]
Length = 667
Score = 128 bits (321), Expect = 9e-28
Identities = 61/112 (54%), Positives = 84/112 (75%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
R + N+ AKQI+KQLLEL Y GLYVL+SN++ E+QRW+DM+K+R++M + GI+K A
Sbjct: 550 RTYGNLEIAKQIMKQLLELGRYDSGLYVLLSNMYSESQRWDDMRKIRKIMDDGGIQKCKA 609
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEGLSTLLLDVEVF 338
+S IEI+GC H+F+VDDK H S SIY +LD+LMDHLKS L V+++
Sbjct: 610 ISCIEIDGCCHQFMVDDKRHLTSASIYSMLDQLMDHLKSVHLCKSFDVVDIY 661
>ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 663
Score = 127 bits (320), Expect = 1e-27
Identities = 61/110 (55%), Positives = 83/110 (75%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
R + N++ KQI+KQLLEL Y+ GLYVL+SN++ E+QRW+DMK + +++ +GIKK A
Sbjct: 547 RTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSESQRWDDMKNIWKILDQNGIKKCRA 606
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEGLSTLLLDVE 332
+S IEI+GC ++F+VDDK H AS SIY +L +LMDHLKS G LDVE
Sbjct: 607 ISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQLMDHLKSAGYPCKHLDVE 656
>gb|EXB96697.1| hypothetical protein L484_011738 [Morus notabilis]
Length = 610
Score = 127 bits (318), Expect = 2e-27
Identities = 57/101 (56%), Positives = 78/101 (77%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH ++ KQILKQL EL +S GLYVL+ NIFCEAQRWED+K +R+LM + G+ K A
Sbjct: 501 RIHGHVEIGKQILKQLFELEPHSSGLYVLLLNIFCEAQRWEDVKNIRKLMKDGGVIKCKA 560
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEG 305
+S +EINGC+H+F +DK+H+ S+ IY+VLD+L +HL+ G
Sbjct: 561 ISFVEINGCVHKFTANDKLHQLSSRIYVVLDRLTNHLRPVG 601
>ref|NP_001142025.1| uncharacterized protein LOC100274179 [Zea mays]
gi|194706828|gb|ACF87498.1| unknown [Zea mays]
Length = 570
Score = 112 bits (280), Expect = 5e-23
Identities = 55/99 (55%), Positives = 71/99 (71%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH N+ KQ++KQLLEL SGGL+VL+SN+ E +WEDMK++R+LM G +K
Sbjct: 457 RIHGNVKIGKQVIKQLLELEGISGGLFVLISNLLYETNQWEDMKRLRKLMKERGTRKDMG 516
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKS 299
VSSIEIN IHEF V+D HE+S+ IY V+D+L HL S
Sbjct: 517 VSSIEINNSIHEFGVEDIRHESSSEIYAVVDQLSYHLIS 555
>ref|XP_002462808.1| hypothetical protein SORBIDRAFT_02g032350 [Sorghum bicolor]
gi|241926185|gb|EER99329.1| hypothetical protein
SORBIDRAFT_02g032350 [Sorghum bicolor]
Length = 638
Score = 109 bits (273), Expect = 3e-22
Identities = 54/99 (54%), Positives = 70/99 (70%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH N+ +Q++KQLLEL SGGL+VL+SN+ E +WEDMK++R+LM G +K
Sbjct: 525 RIHGNVKIGRQVIKQLLELEGISGGLFVLISNLLYETHQWEDMKRLRKLMKEWGTRKDMG 584
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKS 299
VSSIEIN IHEF V+D HE S+ IY V+D+L HL S
Sbjct: 585 VSSIEINNSIHEFGVEDIRHERSSEIYAVVDQLSYHLIS 623
>ref|XP_003576820.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Brachypodium distachyon]
Length = 657
Score = 108 bits (270), Expect = 7e-22
Identities = 52/99 (52%), Positives = 68/99 (68%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH N+ K ++KQLLEL +GGL+VL+ N+F E +WEDMKK+R+LM G KK
Sbjct: 527 RIHGNVEIGKLVIKQLLELEGITGGLFVLICNLFYETNQWEDMKKLRKLMKEQGTKKDMG 586
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKS 299
VSSIE+ IHEF V+D HE++N IY +D+L HL S
Sbjct: 587 VSSIEVKNIIHEFGVEDLRHESTNEIYAAVDQLSYHLVS 625
>gb|EMT03504.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 634
Score = 105 bits (263), Expect = 5e-21
Identities = 51/99 (51%), Positives = 68/99 (68%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH N+ K +KQLLEL +GGL+VL+SN+ E +WEDM+++R+LM G KK
Sbjct: 521 RIHGNVEIGKLAIKQLLELEGMNGGLFVLISNLLYETHQWEDMRRLRKLMRERGTKKDMG 580
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKS 299
VSSIE+N IHEF V+D HE+S+ IY +D+L HL S
Sbjct: 581 VSSIEVNNSIHEFGVEDTRHESSSEIYEAVDQLAYHLVS 619
>dbj|BAJ90933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 634
Score = 105 bits (263), Expect = 5e-21
Identities = 52/99 (52%), Positives = 70/99 (70%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
RIH ++ K +KQLLEL +GGL+VL+SN+ E ++WEDMK++R+LM + G KK
Sbjct: 521 RIHGHVEIGKLAIKQLLELEGINGGLFVLISNLLYETRQWEDMKRLRKLMRDRGTKKDMG 580
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKS 299
VSSIEIN IHEF V+D HE+S+ IY +D+L HL S
Sbjct: 581 VSSIEINNSIHEFGVEDIRHESSSQIYAAVDQLAYHLVS 619
>ref|XP_004959653.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Setaria italica]
Length = 643
Score = 102 bits (253), Expect = 7e-20
Identities = 48/99 (48%), Positives = 69/99 (69%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
R+H ++ +Q++KQLLEL SGGL VL+SN+ E +WEDMK++R+LM G +K
Sbjct: 530 RMHGSVEIGRQVIKQLLELEGISGGLLVLISNLLYETHQWEDMKRLRKLMKGWGTRKDMG 589
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKS 299
+SSIE+N IHEF V++ HE+S+ IY +D+L HL S
Sbjct: 590 ISSIEVNNRIHEFGVEESRHESSSEIYEAVDQLSYHLIS 628
>ref|XP_002300388.2| hypothetical protein POPTR_0001s37860g [Populus trichocarpa]
gi|550349131|gb|EEE85193.2| hypothetical protein
POPTR_0001s37860g [Populus trichocarpa]
Length = 595
Score = 99.8 bits (247), Expect = 3e-19
Identities = 47/114 (41%), Positives = 75/114 (65%), Gaps = 4/114 (3%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
++H+NI A++ +K L EL+ + G YV++SNI+ EA+RWED ++R+LM + G+KK +
Sbjct: 403 KVHKNIDLAEEAIKHLSELDPLNDGYYVVISNIYAEAERWEDAARVRKLMKDRGVKKTSG 462
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEG----LSTLLLDVE 332
SSI +NG +HEF+ D+ H + I + DKL+ +K G S +LLD+E
Sbjct: 463 WSSITVNGVVHEFVAGDQTHPQAEDICKIWDKLLVKMKRRGYAPKTSVVLLDME 516
>ref|XP_006474838.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Citrus sinensis]
Length = 624
Score = 99.4 bits (246), Expect = 4e-19
Identities = 46/114 (40%), Positives = 78/114 (68%), Gaps = 4/114 (3%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
R+H+NI A++ +QL +L+ + G +V++SNI+ EA+RWED+ ++R+LM N G+KK
Sbjct: 433 RVHKNIDLAEEASRQLDQLDPLNNGYHVVLSNIYAEAERWEDVARVRKLMRNLGVKKTPG 492
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEG----LSTLLLDVE 332
SSI ++G +HEF+ D+ H + I+ + +KL+D +K +G S +LLD+E
Sbjct: 493 WSSITVDGVVHEFVAGDETHPQAEKIFQMWEKLLDGMKLKGYIPNTSVVLLDIE 546
>ref|XP_006339048.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum tuberosum]
Length = 680
Score = 99.0 bits (245), Expect = 6e-19
Identities = 45/101 (44%), Positives = 67/101 (66%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
+IHRN+ A++ ++ L++L++ GG +MSNI+ A RWED+ K+R+LM GI K
Sbjct: 488 KIHRNVELAEKAIEHLIQLDLEDGGYLAIMSNIYANAGRWEDVSKVRKLMKEKGIGKSRG 547
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEG 305
+SSIEING IHEF V +K H + IY ++D++ LK G
Sbjct: 548 ISSIEINGVIHEFGVQEKKHPQAREIYDMIDEIYRRLKRAG 588
>gb|EMJ08282.1| hypothetical protein PRUPE_ppa024338mg, partial [Prunus persica]
Length = 611
Score = 99.0 bits (245), Expect = 6e-19
Identities = 48/114 (42%), Positives = 76/114 (66%), Gaps = 4/114 (3%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
++HRNI A++ K L EL+ + G YV++SNI+ EAQRWED ++R+LM + G+KK
Sbjct: 419 KVHRNIELAEEATKHLSELDPLNDGYYVVLSNIYAEAQRWEDTARVRKLMRDRGVKKTPG 478
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEG----LSTLLLDVE 332
SSI ++G IHEF+ D++H + I+ + +KL+ +K +G S +LLD+E
Sbjct: 479 WSSITVDGVIHEFVAGDEVHPQAQEIFQMWEKLVVKMKLKGYVPNTSVVLLDME 532
>ref|XP_006452639.1| hypothetical protein CICLE_v10010822mg [Citrus clementina]
gi|557555865|gb|ESR65879.1| hypothetical protein
CICLE_v10010822mg [Citrus clementina]
Length = 625
Score = 98.6 bits (244), Expect = 8e-19
Identities = 46/114 (40%), Positives = 78/114 (68%), Gaps = 4/114 (3%)
Frame = +3
Query: 3 RIHRNISFAKQILKQLLELNMYSGGLYVLMSNIFCEAQRWEDMKKMRQLMMNHGIKKHNA 182
R+H+NI A++ +QL +L+ + G +V++SNI+ EA+RWED+ ++R+LM N G+KK
Sbjct: 433 RVHKNIDLAEEASRQLGQLDPLNNGYHVVLSNIYAEAERWEDVARVRKLMRNLGVKKTPG 492
Query: 183 VSSIEINGCIHEFLVDDKMHEASNSIYMVLDKLMDHLKSEG----LSTLLLDVE 332
SSI ++G +HEF+ D+ H + I+ + +KL+D +K +G S +LLD+E
Sbjct: 493 WSSITVDGVVHEFVAGDETHLQAEKIFQMWEKLLDGMKLKGYIPNTSVVLLDIE 546