BLASTX nr result

ID: Catharanthus22_contig00031349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00031349
         (272 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006424767.1| hypothetical protein CICLE_v10029787mg [Citr...    62   6e-08
ref|XP_006488273.1| PREDICTED: glycine-rich RNA-binding protein ...    62   8e-08
ref|XP_006350171.1| PREDICTED: glycine-rich RNA-binding protein ...    62   1e-07
ref|XP_006369512.1| hypothetical protein POPTR_0001s24310g [Popu...    61   2e-07
ref|XP_004236595.1| PREDICTED: glycine-rich RNA-binding protein ...    60   4e-07
gb|EOY34118.1| Glycine-rich RNA-binding protein 2 [Theobroma cacao]    59   7e-07
ref|XP_004295934.1| PREDICTED: glycine-rich RNA-binding protein ...    58   1e-06
ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...    57   3e-06
gb|ESW04088.1| hypothetical protein PHAVU_011G066300g [Phaseolus...    55   7e-06
gb|EMJ09112.1| hypothetical protein PRUPE_ppa019460mg [Prunus pe...    55   7e-06

>ref|XP_006424767.1| hypothetical protein CICLE_v10029787mg [Citrus clementina]
           gi|568870157|ref|XP_006488276.1| PREDICTED: glycine-rich
           RNA-binding protein 2, mitochondrial-like isoform X5
           [Citrus sinensis] gi|557526701|gb|ESR38007.1|
           hypothetical protein CICLE_v10029787mg [Citrus
           clementina]
          Length = 106

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 36/69 (52%), Positives = 39/69 (56%), Gaps = 22/69 (31%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIE----------------------ENAASNALKEMDGKLLDG 158
           YDTNET+LKDAF  HGEIIE                      E AA  A+KEMDG LLDG
Sbjct: 36  YDTNETVLKDAFGQHGEIIEVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLDG 95

Query: 157 RDIHVLYAH 131
           R+I V YAH
Sbjct: 96  RNIRVNYAH 104


>ref|XP_006488273.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           isoform X2 [Citrus sinensis]
           gi|568870153|ref|XP_006488274.1| PREDICTED: glycine-rich
           RNA-binding protein 2, mitochondrial-like isoform X3
           [Citrus sinensis] gi|568870155|ref|XP_006488275.1|
           PREDICTED: glycine-rich RNA-binding protein 2,
           mitochondrial-like isoform X4 [Citrus sinensis]
          Length = 107

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 36/70 (51%), Positives = 39/70 (55%), Gaps = 23/70 (32%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIE-----------------------ENAASNALKEMDGKLLD 161
           YDTNET+LKDAF  HGEIIE                       E AA  A+KEMDG LLD
Sbjct: 36  YDTNETVLKDAFGQHGEIIEAVKVICDRVTGQSRGYGFVKFASEAAAGEAIKEMDGLLLD 95

Query: 160 GRDIHVLYAH 131
           GR+I V YAH
Sbjct: 96  GRNIRVNYAH 105


>ref|XP_006350171.1| PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like
           isoform X1 [Solanum tuberosum]
           gi|565367009|ref|XP_006350172.1| PREDICTED: glycine-rich
           RNA-binding protein 4, mitochondrial-like isoform X2
           [Solanum tuberosum] gi|565367011|ref|XP_006350173.1|
           PREDICTED: glycine-rich RNA-binding protein 4,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 105

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 22/69 (31%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIE----------------------ENAASNALKEMDGKLLDG 158
           YDTNE ILK AF+ HGE IE                      E AAS ALKEMDG+LLDG
Sbjct: 35  YDTNEPILKQAFEQHGETIEVKVICDHKSGKSKGYGFVKFTSETAASKALKEMDGQLLDG 94

Query: 157 RDIHVLYAH 131
           R+I + YAH
Sbjct: 95  RNIRISYAH 103


>ref|XP_006369512.1| hypothetical protein POPTR_0001s24310g [Populus trichocarpa]
           gi|550348075|gb|ERP66081.1| hypothetical protein
           POPTR_0001s24310g [Populus trichocarpa]
          Length = 103

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 36/69 (52%), Positives = 40/69 (57%), Gaps = 22/69 (31%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIE----------------------ENAASNALKEMDGKLLDG 158
           YDTNET+LKDAF  +GEIIE                      E AAS ALKEMDG+LLD 
Sbjct: 32  YDTNETVLKDAFGKYGEIIEVKVICHRVYGESKGYGFVQFSSEAAASTALKEMDGQLLDD 91

Query: 157 RDIHVLYAH 131
           R+I V YAH
Sbjct: 92  RNIRVHYAH 100


>ref|XP_004236595.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Solanum lycopersicum]
          Length = 105

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 33/69 (47%), Positives = 39/69 (56%), Gaps = 22/69 (31%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIE----------------------ENAASNALKEMDGKLLDG 158
           YDTNE +LK AF+ HGE IE                      E AAS ALKEMDG+LLDG
Sbjct: 35  YDTNEPVLKQAFEQHGETIEVKVICDHKSGKSKGYGFVKFTSETAASKALKEMDGQLLDG 94

Query: 157 RDIHVLYAH 131
           R+I + +AH
Sbjct: 95  RNIRISFAH 103


>gb|EOY34118.1| Glycine-rich RNA-binding protein 2 [Theobroma cacao]
          Length = 106

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/69 (49%), Positives = 40/69 (57%), Gaps = 22/69 (31%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIE----------------------ENAASNALKEMDGKLLDG 158
           YDTNET+LKDAF+ HGEIIE                      E AA+ ALKEM  ++LDG
Sbjct: 36  YDTNETVLKDAFEKHGEIIEVRVICHHVSGKSRGYGFVRFASEAAANAALKEMHSQVLDG 95

Query: 157 RDIHVLYAH 131
           R+I V YAH
Sbjct: 96  RNIRVEYAH 104


>ref|XP_004295934.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Fragaria vesca subsp. vesca]
          Length = 108

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 33/69 (47%), Positives = 38/69 (55%), Gaps = 22/69 (31%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIE----------------------ENAASNALKEMDGKLLDG 158
           YDTNE +LKDAF  HGEIIE                      E  AS ALKEMDG++LDG
Sbjct: 38  YDTNEPVLKDAFGKHGEIIEVKVICDHVSGKSKGYGFVKFTSETEASTALKEMDGQVLDG 97

Query: 157 RDIHVLYAH 131
           R I + +AH
Sbjct: 98  RQIRLEFAH 106


>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/69 (49%), Positives = 39/69 (56%), Gaps = 22/69 (31%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIE----------------------ENAASNALKEMDGKLLDG 158
           YDTNETILKDAF  +GEIIE                      ++ A  ALKEMDG+ LDG
Sbjct: 38  YDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQFTSDDDAHIALKEMDGQSLDG 97

Query: 157 RDIHVLYAH 131
           R+I V YAH
Sbjct: 98  RNIRVTYAH 106


>gb|ESW04088.1| hypothetical protein PHAVU_011G066300g [Phaseolus vulgaris]
           gi|561005095|gb|ESW04089.1| hypothetical protein
           PHAVU_011G066300g [Phaseolus vulgaris]
          Length = 108

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 22/71 (30%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIE----------------------ENAASNALKEMDGKLLDG 158
           +DTNE IL+DAF+ HGEIIE                      E  A+ A KEM+G++LDG
Sbjct: 38  WDTNEPILRDAFEQHGEIIEVRVICDQVTGKSKGYGLVRFVSETTAATARKEMNGQILDG 97

Query: 157 RDIHVLYAHGR 125
           R I V YAH R
Sbjct: 98  RRIRVSYAHKR 108


>gb|EMJ09112.1| hypothetical protein PRUPE_ppa019460mg [Prunus persica]
          Length = 106

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 32/69 (46%), Positives = 37/69 (53%), Gaps = 22/69 (31%)
 Frame = -2

Query: 271 YDTNETILKDAFKPHGEIIEENA----------------------ASNALKEMDGKLLDG 158
           YDTNE +LK+AF  HGEIIE                         AS ALKEMDG+LLDG
Sbjct: 36  YDTNEPVLKEAFGKHGEIIEVKVICDHVSGKSKGYGFVKFTSGIEASTALKEMDGQLLDG 95

Query: 157 RDIHVLYAH 131
           R I + +AH
Sbjct: 96  RQIRLEFAH 104


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