BLASTX nr result

ID: Catharanthus22_contig00031250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00031250
         (362 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006386724.1| hypothetical protein POPTR_0002s20040g [Popu...    61   2e-07
ref|XP_002515319.1| conserved hypothetical protein [Ricinus comm...    55   7e-06

>ref|XP_006386724.1| hypothetical protein POPTR_0002s20040g [Populus trichocarpa]
           gi|550345433|gb|ERP64521.1| hypothetical protein
           POPTR_0002s20040g [Populus trichocarpa]
          Length = 86

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 41/86 (47%), Positives = 53/86 (61%), Gaps = 13/86 (15%)
 Frame = -3

Query: 309 MASEKCE-EISKERNEVIETTSSSS------------RLGKAVAHRAVYGPNMSRRQGKS 169
           MA+EK + E+S   N+ I+ TS+ +            R GKA+AHRA+YG   S R G S
Sbjct: 1   MATEKADVEVSDTNNDGIQNTSTHTSVNSETPTSAVPRFGKALAHRALYGS--SSRHGGS 58

Query: 168 RKVRNQLFVDNKTLPSRLSRVSVADD 91
           RK R+    D KTLPSRLS+VS+ADD
Sbjct: 59  RKARSS---DVKTLPSRLSKVSLADD 81


>ref|XP_002515319.1| conserved hypothetical protein [Ricinus communis]
           gi|223545799|gb|EEF47303.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 83

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -3

Query: 291 EEISKERNEVIETTSSSSRLGKAVAHRAVYGPNMSRRQGKSRKVRNQLFVDNKTLPSRLS 112
           +E S E +   +  ++  R GKA+AHRA+YG + SRR G SRKVR+    D +TLPSRLS
Sbjct: 19  QEKSAESSSNSKEFTAPPRFGKALAHRALYGSS-SRRAG-SRKVRDN---DTRTLPSRLS 73

Query: 111 RVSVADD 91
            VS+ADD
Sbjct: 74  NVSLADD 80


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