BLASTX nr result
ID: Catharanthus22_contig00031233
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00031233
(304 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chlor... 188 6e-46
gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus pe... 188 6e-46
gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis] 185 6e-45
gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma ... 184 1e-44
ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chlor... 182 3e-44
emb|CAN68642.1| hypothetical protein VITISV_030809 [Vitis vinifera] 182 3e-44
ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citr... 181 9e-44
ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citr... 181 9e-44
ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chl... 181 1e-43
gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus... 180 2e-43
ref|XP_006413737.1| hypothetical protein EUTSA_v10025093mg [Eutr... 180 2e-43
ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Caps... 180 2e-43
ref|XP_002304926.2| pseudouridine synthase family protein [Popul... 179 3e-43
ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chlor... 179 3e-43
ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chl... 178 6e-43
ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chl... 178 6e-43
ref|XP_006597578.1| PREDICTED: RNA pseudouridine synthase 6, chl... 177 1e-42
ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chl... 177 1e-42
ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chl... 177 1e-42
ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chl... 177 1e-42
>ref|XP_004293270.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 477
Score = 188 bits (478), Expect = 6e-46
Identities = 85/100 (85%), Positives = 96/100 (96%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA+YYALVCPKPPPTATPEQM++Y+EVTAPSVL+KR SIKGKTVREAQKTFR
Sbjct: 123 FVADLIHFGAVYYALVCPKPPPTATPEQMRVYKEVTAPSVLKKRDSIKGKTVREAQKTFR 182
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTE 301
I+H D++VE GTYLRVHVHPKRFPRCY+IDW SR+IAVTE
Sbjct: 183 ITHADQYVEDGTYLRVHVHPKRFPRCYDIDWKSRVIAVTE 222
>gb|EMJ14726.1| hypothetical protein PRUPE_ppa020640mg [Prunus persica]
Length = 477
Score = 188 bits (478), Expect = 6e-46
Identities = 86/100 (86%), Positives = 96/100 (96%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA+YYALVCPKPPPTATPEQM++++EVTAPSVL+ RASIKGKTVREAQKTFR
Sbjct: 123 FVADLIHFGAVYYALVCPKPPPTATPEQMRVFKEVTAPSVLKNRASIKGKTVREAQKTFR 182
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTE 301
I+H DEFVE GTYLRVHVHPKRFPRCY+IDW SRIIAV+E
Sbjct: 183 ITHADEFVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVSE 222
>gb|EXB88442.1| RNA pseudourine synthase 6 [Morus notabilis]
Length = 446
Score = 185 bits (469), Expect = 6e-45
Identities = 86/101 (85%), Positives = 96/101 (95%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA++YALVCPKPPPTATPEQ+K+++EVTAPSVLRKRASIKGKTVREAQKTFR
Sbjct: 123 FVADLIHFGAVHYALVCPKPPPTATPEQIKVFKEVTAPSVLRKRASIKGKTVREAQKTFR 182
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
I+ ++FVE GTYLRVHVHPKRFPRCYEIDW SRIIAV ES
Sbjct: 183 ITDREQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVAES 223
>gb|EOY28643.1| Pseudouridine synthase family protein [Theobroma cacao]
Length = 491
Score = 184 bits (466), Expect = 1e-44
Identities = 84/101 (83%), Positives = 96/101 (95%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA+YYALVCP+PPP+ATPEQ++I++EVTAPSVL KR SI+GKTVREAQKTFR
Sbjct: 136 FVADLIHFGAVYYALVCPQPPPSATPEQIRIFKEVTAPSVLSKRTSIRGKTVREAQKTFR 195
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
I+H D+FVE GTYLRVHVHPKRFPRCYEIDW SRIIAVT+S
Sbjct: 196 ITHVDQFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTDS 236
>ref|XP_002264641.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic [Vitis
vinifera] gi|302144082|emb|CBI23187.3| unnamed protein
product [Vitis vinifera]
Length = 472
Score = 182 bits (463), Expect = 3e-44
Identities = 84/101 (83%), Positives = 96/101 (95%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA+YYALVCP+PPP+ATPEQ+++++EVTAPSVLRKR SIKGKT+REAQKTFR
Sbjct: 120 FVADLIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFR 179
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
I+ +EFVE GTYLRVHVHPKRFPRCYEIDW SRIIAVTES
Sbjct: 180 ITDVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTES 220
>emb|CAN68642.1| hypothetical protein VITISV_030809 [Vitis vinifera]
Length = 400
Score = 182 bits (463), Expect = 3e-44
Identities = 84/101 (83%), Positives = 96/101 (95%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA+YYALVCP+PPP+ATPEQ+++++EVTAPSVLRKR SIKGKT+REAQKTFR
Sbjct: 105 FVADLIHFGAVYYALVCPEPPPSATPEQVRLFKEVTAPSVLRKRPSIKGKTIREAQKTFR 164
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
I+ +EFVE GTYLRVHVHPKRFPRCYEIDW SRIIAVTES
Sbjct: 165 ITDVNEFVEAGTYLRVHVHPKRFPRCYEIDWKSRIIAVTES 205
>ref|XP_006449066.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551677|gb|ESR62306.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 487
Score = 181 bits (459), Expect = 9e-44
Identities = 84/101 (83%), Positives = 94/101 (93%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA+YYALVCPKPP TATPEQM++++EVT PSVL KR+SIKGKTVREAQKTFR
Sbjct: 126 FVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFR 185
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
I+H D+ VE GTYLRVHVHPKRFPRCY+IDW SRIIAVTES
Sbjct: 186 ITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTES 226
>ref|XP_006449063.1| hypothetical protein CICLE_v10015055mg [Citrus clementina]
gi|557551674|gb|ESR62303.1| hypothetical protein
CICLE_v10015055mg [Citrus clementina]
Length = 392
Score = 181 bits (459), Expect = 9e-44
Identities = 84/101 (83%), Positives = 94/101 (93%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA+YYALVCPKPP TATPEQM++++EVT PSVL KR+SIKGKTVREAQKTFR
Sbjct: 31 FVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFR 90
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
I+H D+ VE GTYLRVHVHPKRFPRCY+IDW SRIIAVTES
Sbjct: 91 ITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTES 131
>ref|XP_006468002.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Citrus sinensis] gi|568827302|ref|XP_006468003.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Citrus sinensis]
Length = 487
Score = 181 bits (458), Expect = 1e-43
Identities = 84/101 (83%), Positives = 94/101 (93%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA+YYALVCPKPP TATPEQM++++EVT PSVL KR+SIKGKTVREAQKTFR
Sbjct: 126 FVADLIHFGAVYYALVCPKPPLTATPEQMRVFKEVTDPSVLSKRSSIKGKTVREAQKTFR 185
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
I+H D+ VE GTYLRVHVHPKRFPRCY+IDW SRIIAVTES
Sbjct: 186 ITHVDQIVEAGTYLRVHVHPKRFPRCYDIDWNSRIIAVTES 226
>gb|ESW19737.1| hypothetical protein PHAVU_006G151200g [Phaseolus vulgaris]
Length = 478
Score = 180 bits (456), Expect = 2e-43
Identities = 81/101 (80%), Positives = 94/101 (93%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YV DLI FGA+YYALVCP+PPP+AT EQ+++++EVT PSVLR+RASIKGKTVREAQKTFR
Sbjct: 125 YVTDLIQFGAVYYALVCPQPPPSATEEQIRVFKEVTEPSVLRQRASIKGKTVREAQKTFR 184
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
++H D+FVEPGTYLRVHVHPKRFPRCYEIDW SRII+V ES
Sbjct: 185 VTHADQFVEPGTYLRVHVHPKRFPRCYEIDWRSRIISVAES 225
>ref|XP_006413737.1| hypothetical protein EUTSA_v10025093mg [Eutrema salsugineum]
gi|557114907|gb|ESQ55190.1| hypothetical protein
EUTSA_v10025093mg [Eutrema salsugineum]
Length = 475
Score = 180 bits (456), Expect = 2e-43
Identities = 83/101 (82%), Positives = 95/101 (94%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YVADLI FGAI+YALVCPKPPPTATPEQ+K++EEVT+PSVL KR+SIKGKTVREAQKTFR
Sbjct: 120 YVADLIQFGAIHYALVCPKPPPTATPEQIKLFEEVTSPSVLSKRSSIKGKTVREAQKTFR 179
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
++H +++VE GTYLRVHVHPKR PRCYEIDW SRIIAVT+S
Sbjct: 180 VTHTNQYVEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVTDS 220
>ref|XP_006284907.1| hypothetical protein CARUB_v10006203mg [Capsella rubella]
gi|482553612|gb|EOA17805.1| hypothetical protein
CARUB_v10006203mg [Capsella rubella]
Length = 479
Score = 180 bits (456), Expect = 2e-43
Identities = 81/101 (80%), Positives = 95/101 (94%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YVADLI FGA++YALVCPKPPPTATPE++K++EEVT+PSVL+KR+SIKGKTVREAQKTFR
Sbjct: 124 YVADLIRFGAVHYALVCPKPPPTATPEEIKLFEEVTSPSVLKKRSSIKGKTVREAQKTFR 183
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
++H D++ E GTYLRVHVHPKR PRCYEIDW SRIIAVT+S
Sbjct: 184 VTHTDQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIIAVTDS 224
>ref|XP_002304926.2| pseudouridine synthase family protein [Populus trichocarpa]
gi|550340110|gb|EEE85437.2| pseudouridine synthase
family protein [Populus trichocarpa]
Length = 470
Score = 179 bits (454), Expect = 3e-43
Identities = 82/101 (81%), Positives = 95/101 (94%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
+VADLIHFGA++YALVCP+PP TATPEQ++++EEVTAPSVL+KRASIKGKTVREAQKTFR
Sbjct: 114 FVADLIHFGAVHYALVCPQPPRTATPEQIRVFEEVTAPSVLKKRASIKGKTVREAQKTFR 173
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
I+H D+F+E G YLRVHVHPKRFPRCY+IDW SRII VTES
Sbjct: 174 ITHVDQFLEAGMYLRVHVHPKRFPRCYDIDWKSRIIHVTES 214
>ref|XP_004232727.1| PREDICTED: RNA pseudourine synthase 6, chloroplastic-like [Solanum
lycopersicum]
Length = 448
Score = 179 bits (454), Expect = 3e-43
Identities = 83/100 (83%), Positives = 91/100 (91%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YV DLI FGA+YYALVCPKPPPTA+PEQ+K+YEEVT PSVLRKR SIKGKTVREAQKTF+
Sbjct: 96 YVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSVLRKRTSIKGKTVREAQKTFK 155
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTE 301
I+ DE VE GTYLRVHVHPKRFPRCY+IDW SRIIAVT+
Sbjct: 156 ITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTD 195
>ref|XP_006594433.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X2 [Glycine max]
Length = 390
Score = 178 bits (452), Expect = 6e-43
Identities = 82/101 (81%), Positives = 93/101 (92%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YV+DLI FGA+YYALVCP+PPP AT EQ+++++EVT PSVLRKRASIKGKTVREAQKTFR
Sbjct: 125 YVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFR 184
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
++H D+FVEPGTYLRVHVHPKRFPR YEIDW SRIIAV ES
Sbjct: 185 VTHVDQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAES 225
>ref|XP_003541622.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Glycine max]
Length = 478
Score = 178 bits (452), Expect = 6e-43
Identities = 82/101 (81%), Positives = 93/101 (92%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YV+DLI FGA+YYALVCP+PPP AT EQ+++++EVT PSVLRKRASIKGKTVREAQKTFR
Sbjct: 125 YVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFR 184
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
++H D+FVEPGTYLRVHVHPKRFPR YEIDW SRIIAV ES
Sbjct: 185 VTHVDQFVEPGTYLRVHVHPKRFPRSYEIDWRSRIIAVAES 225
>ref|XP_006597578.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X2 [Glycine max]
Length = 390
Score = 177 bits (450), Expect = 1e-42
Identities = 81/101 (80%), Positives = 92/101 (91%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YV+DLI FGA+YYALVCP+PPP AT EQ+++++EVT PSVLRKRASIKGKTVREAQKTFR
Sbjct: 125 YVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFR 184
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
++H D+FVEPGTYLRVHVHPKR PRCYEIDW SRII V ES
Sbjct: 185 VTHVDQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAES 225
>ref|XP_003547248.2| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Glycine max]
Length = 478
Score = 177 bits (450), Expect = 1e-42
Identities = 81/101 (80%), Positives = 92/101 (91%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YV+DLI FGA+YYALVCP+PPP AT EQ+++++EVT PSVLRKRASIKGKTVREAQKTFR
Sbjct: 125 YVSDLIQFGAVYYALVCPQPPPNATEEQIRVFKEVTEPSVLRKRASIKGKTVREAQKTFR 184
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTES 304
++H D+FVEPGTYLRVHVHPKR PRCYEIDW SRII V ES
Sbjct: 185 VTHVDQFVEPGTYLRVHVHPKRSPRCYEIDWRSRIITVAES 225
>ref|XP_006348096.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X3 [Solanum tuberosum]
Length = 440
Score = 177 bits (449), Expect = 1e-42
Identities = 81/100 (81%), Positives = 91/100 (91%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YV DLI FGA+YYALVCPKPPPTA+PEQ+K+YEEVT PS+LR+R SIKGKTVREAQKTF+
Sbjct: 88 YVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFK 147
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTE 301
I+ DE VE GTYLRVHVHPKRFPRCY+IDW SRIIAVT+
Sbjct: 148 ITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTD 187
>ref|XP_006348094.1| PREDICTED: RNA pseudouridine synthase 6, chloroplastic-like isoform
X1 [Solanum tuberosum] gi|565362724|ref|XP_006348095.1|
PREDICTED: RNA pseudouridine synthase 6,
chloroplastic-like isoform X2 [Solanum tuberosum]
Length = 483
Score = 177 bits (449), Expect = 1e-42
Identities = 81/100 (81%), Positives = 91/100 (91%)
Frame = +2
Query: 2 YVADLIHFGAIYYALVCPKPPPTATPEQMKIYEEVTAPSVLRKRASIKGKTVREAQKTFR 181
YV DLI FGA+YYALVCPKPPPTA+PEQ+K+YEEVT PS+LR+R SIKGKTVREAQKTF+
Sbjct: 131 YVEDLIQFGAVYYALVCPKPPPTASPEQIKVYEEVTDPSILRQRTSIKGKTVREAQKTFK 190
Query: 182 ISHPDEFVEPGTYLRVHVHPKRFPRCYEIDWASRIIAVTE 301
I+ DE VE GTYLRVHVHPKRFPRCY+IDW SRIIAVT+
Sbjct: 191 ITRADEIVEAGTYLRVHVHPKRFPRCYDIDWKSRIIAVTD 230