BLASTX nr result
ID: Catharanthus22_contig00030785
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00030785
(832 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY09608.1| SC35-like splicing factor 33 isoform 1 [Theobroma... 127 5e-33
emb|CBI16510.3| unnamed protein product [Vitis vinifera] 133 6e-33
ref|XP_006429950.1| hypothetical protein CICLE_v10012758mg [Citr... 124 2e-32
ref|XP_002531582.1| serine/arginine rich splicing factor, putati... 122 2e-32
ref|XP_006481690.1| PREDICTED: serine/arginine-rich splicing fac... 122 5e-32
ref|XP_006481691.1| PREDICTED: serine/arginine-rich splicing fac... 121 9e-32
ref|XP_006429951.1| hypothetical protein CICLE_v10012758mg [Citr... 121 9e-32
ref|XP_004303370.1| PREDICTED: serine/arginine-rich splicing fac... 118 3e-31
ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263... 126 6e-31
gb|EOY09609.1| SC35-like splicing factor 33 isoform 2 [Theobroma... 120 7e-31
gb|AFK42741.1| unknown [Lotus japonicus] 112 1e-29
gb|EOY09610.1| SC35-like splicing factor 33 isoform 3 [Theobroma... 118 1e-29
ref|XP_006373800.1| hypothetical protein POPTR_0016s06240g [Popu... 109 4e-29
ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thali... 115 1e-28
gb|AAK93651.1| unknown protein [Arabidopsis thaliana] 115 1e-28
gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidops... 115 1e-28
ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis th... 115 1e-28
ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis th... 115 2e-28
ref|XP_003544854.1| PREDICTED: serine/arginine-rich splicing fac... 117 7e-28
gb|ESW17717.1| hypothetical protein PHAVU_007G262600g [Phaseolus... 112 7e-28
>gb|EOY09608.1| SC35-like splicing factor 33 isoform 1 [Theobroma cacao]
Length = 236
Score = 127 bits (320), Expect(2) = 5e-33
Identities = 72/102 (70%), Positives = 82/102 (80%), Gaps = 3/102 (2%)
Frame = +2
Query: 119 SLNFAL*REPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARE 298
+LNFA REPRGFGFVQ++D ADA +AKY MDG +L+ RELTVVFAEENRKKPSEMRAR+
Sbjct: 95 NLNFAPTREPRGFGFVQYLDSADAADAKYHMDGYVLLGRELTVVFAEENRKKPSEMRARD 154
Query: 299 CVRGQAQSYGRS---YSRSPPCYARRTYSRSNDYYSPPPQQR 415
VRG A Y RS YSRSP YA R+YSRS DYYSP P++R
Sbjct: 155 RVRGLA--YRRSPLRYSRSPR-YA-RSYSRSPDYYSPSPRRR 192
Score = 40.8 bits (94), Expect(2) = 5e-33
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRS 488
RSISPRDRR R RS S SPYGSRS
Sbjct: 196 RSISPRDRRYRGRSCSRSPYGSRS 219
>emb|CBI16510.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 133 bits (334), Expect(2) = 6e-33
Identities = 77/123 (62%), Positives = 87/123 (70%), Gaps = 10/123 (8%)
Frame = +2
Query: 77 EYKCEEVEVLK---NLKS----LNFAL*REPRGFGFVQFVDPADATEAKYQMDGQILIDR 235
+Y E++VLK NL+ L L REPRGFGFVQ+VDPADA EAKYQMDGQIL R
Sbjct: 72 DYYTGEIKVLKTSINLEEFQVILKLTLAREPRGFGFVQYVDPADAAEAKYQMDGQILHGR 131
Query: 236 ELTVVFAEENRKKPSEMRARECVRGQAQSYGRS---YSRSPPCYARRTYSRSNDYYSPPP 406
ELTVVFAEENRKKPS+MRARE RG+ RS YSRSPP R+ SR DYYSP P
Sbjct: 132 ELTVVFAEENRKKPSDMRARERGRGRFYDRRRSPLRYSRSPPPRHARSPSRGRDYYSPSP 191
Query: 407 QQR 415
++R
Sbjct: 192 KRR 194
Score = 35.0 bits (79), Expect(2) = 6e-33
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 12/43 (27%)
Frame = +3
Query: 417 RSISPRDRR----------NRKRSYSESP--YGSRSRSLTPIK 509
RS+SP+DRR R+RSY+ SP GSRSRS +PI+
Sbjct: 198 RSVSPQDRRYSRDRSYTPDGRRRSYTRSPPYNGSRSRSQSPIR 240
>ref|XP_006429950.1| hypothetical protein CICLE_v10012758mg [Citrus clementina]
gi|557532007|gb|ESR43190.1| hypothetical protein
CICLE_v10012758mg [Citrus clementina]
Length = 210
Score = 124 bits (310), Expect(2) = 2e-32
Identities = 65/95 (68%), Positives = 76/95 (80%), Gaps = 5/95 (5%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
EPRGFGFVQ++DPADA +AKY MDG +L+ RELTVVFAEENRKKPSEMRARE R +++S
Sbjct: 77 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE--RFRSRS 134
Query: 323 YGRSYSRSPPCYAR-----RTYSRSNDYYSPPPQQ 412
Y R RSPP Y+R R YSRS DYYSPPP++
Sbjct: 135 YDR--RRSPPRYSRSPHYARGYSRSPDYYSPPPRR 167
Score = 42.7 bits (99), Expect(2) = 2e-32
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRSRS 494
RSISPR RR R+RSYS SPYGSRS S
Sbjct: 172 RSISPRYRRYRERSYSRSPYGSRSYS 197
>ref|XP_002531582.1| serine/arginine rich splicing factor, putative [Ricinus communis]
gi|223528778|gb|EEF30785.1| serine/arginine rich
splicing factor, putative [Ricinus communis]
Length = 216
Score = 122 bits (306), Expect(2) = 2e-32
Identities = 66/96 (68%), Positives = 76/96 (79%), Gaps = 5/96 (5%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
EPRGFGFVQ+VDPADA +AK+ MDG+IL+ RELTVVFAEENRKKP+EMRARE VRG +S
Sbjct: 79 EPRGFGFVQYVDPADAADAKHHMDGEILLGRELTVVFAEENRKKPAEMRARERVRG--RS 136
Query: 323 YGRSYSRSPPCYA-----RRTYSRSNDYYSPPPQQR 415
Y R RSP CY+ RR+YSRS YYS P+QR
Sbjct: 137 YDR--KRSPQCYSRSPRYRRSYSRSPLYYSRSPRQR 170
Score = 43.9 bits (102), Expect(2) = 2e-32
Identities = 20/29 (68%), Positives = 24/29 (82%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRSRSLTP 503
RSISPRDRR R++S+S SPY RS+S TP
Sbjct: 174 RSISPRDRRYREQSFSRSPYAPRSQSRTP 202
>ref|XP_006481690.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X1
[Citrus sinensis]
Length = 210
Score = 122 bits (306), Expect(2) = 5e-32
Identities = 64/95 (67%), Positives = 76/95 (80%), Gaps = 5/95 (5%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
EPRGFGFVQ++DPADA +AKY MDG +L+ RELTVVFAEENRKKPSEMRARE R +++S
Sbjct: 77 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE--RFRSRS 134
Query: 323 YGRSYSRSPPCYAR-----RTYSRSNDYYSPPPQQ 412
Y R +SPP Y+R R YSRS DYYSPPP++
Sbjct: 135 YDR--RQSPPRYSRSPHYARGYSRSPDYYSPPPRR 167
Score = 42.7 bits (99), Expect(2) = 5e-32
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRSRS 494
RSISPR RR R+RSYS SPYGSRS S
Sbjct: 172 RSISPRYRRYRERSYSRSPYGSRSYS 197
>ref|XP_006481691.1| PREDICTED: serine/arginine-rich splicing factor 33-like isoform X2
[Citrus sinensis]
Length = 209
Score = 121 bits (304), Expect(2) = 9e-32
Identities = 64/97 (65%), Positives = 73/97 (75%), Gaps = 7/97 (7%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
EPRGFGFVQ++DPADA +AKY MDG +L+ RELTVVFAEENRKKPSEMRARE
Sbjct: 77 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE-------R 129
Query: 323 YGRSYSR--SPPCYAR-----RTYSRSNDYYSPPPQQ 412
+ RSY R SPP Y+R R YSRS DYYSPPP++
Sbjct: 130 FSRSYDRRQSPPRYSRSPHYARGYSRSPDYYSPPPRR 166
Score = 42.7 bits (99), Expect(2) = 9e-32
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRSRS 494
RSISPR RR R+RSYS SPYGSRS S
Sbjct: 171 RSISPRYRRYRERSYSRSPYGSRSYS 196
>ref|XP_006429951.1| hypothetical protein CICLE_v10012758mg [Citrus clementina]
gi|557532008|gb|ESR43191.1| hypothetical protein
CICLE_v10012758mg [Citrus clementina]
Length = 209
Score = 121 bits (304), Expect(2) = 9e-32
Identities = 64/97 (65%), Positives = 73/97 (75%), Gaps = 7/97 (7%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
EPRGFGFVQ++DPADA +AKY MDG +L+ RELTVVFAEENRKKPSEMRARE
Sbjct: 77 EPRGFGFVQYIDPADAADAKYHMDGYLLLGRELTVVFAEENRKKPSEMRARE-------R 129
Query: 323 YGRSYS--RSPPCYAR-----RTYSRSNDYYSPPPQQ 412
+ RSY RSPP Y+R R YSRS DYYSPPP++
Sbjct: 130 FSRSYDRRRSPPRYSRSPHYARGYSRSPDYYSPPPRR 166
Score = 42.7 bits (99), Expect(2) = 9e-32
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRSRS 494
RSISPR RR R+RSYS SPYGSRS S
Sbjct: 171 RSISPRYRRYRERSYSRSPYGSRSYS 196
>ref|XP_004303370.1| PREDICTED: serine/arginine-rich splicing factor 33-like [Fragaria
vesca subsp. vesca]
Length = 212
Score = 118 bits (296), Expect(2) = 3e-31
Identities = 64/92 (69%), Positives = 73/92 (79%), Gaps = 1/92 (1%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
+PRGFGFVQFVDPADA +AKY MDGQIL+ RELTVVFAEENRKKPSEMRAR+ RG++
Sbjct: 79 DPRGFGFVQFVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPSEMRARD--RGRSYD 136
Query: 323 YGRS-YSRSPPCYARRTYSRSNDYYSPPPQQR 415
RS YS SP C +T SRS DYYSP ++R
Sbjct: 137 SRRSGYSHSPHC--SQTCSRSPDYYSPSSRRR 166
Score = 44.3 bits (103), Expect(2) = 3e-31
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRSRS 494
RSISPRDRR R+ SYS SPYGSR RS
Sbjct: 170 RSISPRDRRYREPSYSRSPYGSRCRS 195
>ref|XP_002285703.1| PREDICTED: uncharacterized protein LOC100263951 [Vitis vinifera]
Length = 245
Score = 126 bits (317), Expect(2) = 6e-31
Identities = 67/94 (71%), Positives = 73/94 (77%), Gaps = 3/94 (3%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
EPRGFGFVQ+VDPADA EAKYQMDGQIL RELTVVFAEENRKKPS+MRARE RG+
Sbjct: 77 EPRGFGFVQYVDPADAAEAKYQMDGQILHGRELTVVFAEENRKKPSDMRARERGRGRFYD 136
Query: 323 YGRS---YSRSPPCYARRTYSRSNDYYSPPPQQR 415
RS YSRSPP R+ SR DYYSP P++R
Sbjct: 137 RRRSPLRYSRSPPPRHARSPSRGRDYYSPSPKRR 170
Score = 35.0 bits (79), Expect(2) = 6e-31
Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 12/43 (27%)
Frame = +3
Query: 417 RSISPRDRR----------NRKRSYSESP--YGSRSRSLTPIK 509
RS+SP+DRR R+RSY+ SP GSRSRS +PI+
Sbjct: 174 RSVSPQDRRYSRDRSYTPDGRRRSYTRSPPYNGSRSRSQSPIR 216
>gb|EOY09609.1| SC35-like splicing factor 33 isoform 2 [Theobroma cacao]
Length = 210
Score = 120 bits (301), Expect(2) = 7e-31
Identities = 67/94 (71%), Positives = 76/94 (80%), Gaps = 3/94 (3%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
EPRGFGFVQ++D ADA +AKY MDG +L+ RELTVVFAEENRKKPSEMRAR+ VRG A
Sbjct: 77 EPRGFGFVQYLDSADAADAKYHMDGYVLLGRELTVVFAEENRKKPSEMRARDRVRGLA-- 134
Query: 323 YGRS---YSRSPPCYARRTYSRSNDYYSPPPQQR 415
Y RS YSRSP YA R+YSRS DYYSP P++R
Sbjct: 135 YRRSPLRYSRSPR-YA-RSYSRSPDYYSPSPRRR 166
Score = 40.8 bits (94), Expect(2) = 7e-31
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRS 488
RSISPRDRR R RS S SPYGSRS
Sbjct: 170 RSISPRDRRYRGRSCSRSPYGSRS 193
>gb|AFK42741.1| unknown [Lotus japonicus]
Length = 221
Score = 112 bits (280), Expect(2) = 1e-29
Identities = 61/95 (64%), Positives = 70/95 (73%), Gaps = 5/95 (5%)
Frame = +2
Query: 146 PRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQSY 325
PRGFGFVQ+VDPADA +AKY +DGQIL+ RELTVVFAEENRKKP+EMRARE + +SY
Sbjct: 79 PRGFGFVQYVDPADAADAKYHLDGQILLGRELTVVFAEENRKKPAEMRARERHSTRERSY 138
Query: 326 GRSYSRSPPCYAR-----RTYSRSNDYYSPPPQQR 415
Y RSP Y+R RTYSRS DY P + R
Sbjct: 139 --DYRRSPRGYSRSPRYARTYSRSPDYTPSPRRWR 171
Score = 44.7 bits (104), Expect(2) = 1e-29
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRSRS 494
+SISPRDRR +RSYS SPYGSRSRS
Sbjct: 174 KSISPRDRRYGRRSYSGSPYGSRSRS 199
>gb|EOY09610.1| SC35-like splicing factor 33 isoform 3 [Theobroma cacao]
Length = 207
Score = 118 bits (295), Expect(2) = 1e-29
Identities = 66/92 (71%), Positives = 74/92 (80%), Gaps = 3/92 (3%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
EPRGFGFVQ++D ADA +AKY MDG +L+ RELTVVFAEENRKKPSEMRAR+ VRG A
Sbjct: 77 EPRGFGFVQYLDSADAADAKYHMDGYVLLGRELTVVFAEENRKKPSEMRARDRVRGLA-- 134
Query: 323 YGRS---YSRSPPCYARRTYSRSNDYYSPPPQ 409
Y RS YSRSP YA R+YSRS DYYSP P+
Sbjct: 135 YRRSPLRYSRSPR-YA-RSYSRSPDYYSPSPR 164
Score = 38.9 bits (89), Expect(2) = 1e-29
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = +3
Query: 420 SISPRDRRNRKRSYSESPYGSRS 488
SISPRDRR R RS S SPYGSRS
Sbjct: 168 SISPRDRRYRGRSCSRSPYGSRS 190
>ref|XP_006373800.1| hypothetical protein POPTR_0016s06240g [Populus trichocarpa]
gi|550320957|gb|ERP51597.1| hypothetical protein
POPTR_0016s06240g [Populus trichocarpa]
Length = 200
Score = 109 bits (272), Expect(2) = 4e-29
Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 5/84 (5%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECV-RGQAQ 319
EPRGFGFVQ+++PADA +AK+ MDG+IL RELTVVFAEENRKKP+EMRAR+ V R +
Sbjct: 77 EPRGFGFVQYLEPADAADAKHHMDGEILFGRELTVVFAEENRKKPAEMRARDRVRRSPSP 136
Query: 320 SYGRSYSRSPPCYA----RRTYSR 379
YGRSYSRSP Y+ RR YSR
Sbjct: 137 RYGRSYSRSPVYYSPSSRRRHYSR 160
Score = 46.2 bits (108), Expect(2) = 4e-29
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRSRSLTPIK 509
R +SPRDRR R +SYS SPYGSRS S +PI+
Sbjct: 160 RPVSPRDRRYRDQSYSRSPYGSRSYSRSPIR 190
>ref|NP_564685.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|75337149|sp|Q9SEU4.1|SR33_ARATH RecName:
Full=Serine/arginine-rich splicing factor 33; AltName:
Full=SC35-like splicing factor 33; Short=At-SCL33;
Short=AtSCL33 gi|6572475|gb|AAF17288.1|AF099940_1
Serine/arginine-rich protein [Arabidopsis thaliana]
gi|9843659|emb|CAC03603.1| SC35-like splicing factor
SCL33, 33 kD [Arabidopsis thaliana]
gi|56744214|gb|AAW28547.1| At1g55310 [Arabidopsis
thaliana] gi|332195101|gb|AEE33222.1| SC35-like splicing
factor 33 [Arabidopsis thaliana]
Length = 287
Score = 115 bits (289), Expect(2) = 1e-28
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 6/96 (6%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
+PRGFGFVQF+DPADA +AK+ MDG +L+ RELTVVFAEENRKKP+EMRARE G+ +
Sbjct: 75 DPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRD 134
Query: 323 YGR------SYSRSPPCYARRTYSRSNDYYSPPPQQ 412
R S SRSPP R+ SRS DYYSPPP++
Sbjct: 135 RRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRR 170
Score = 37.7 bits (86), Expect(2) = 1e-28
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
Frame = +3
Query: 417 RSISPRDRR-NRKRSYSESPY--GSRSRSLTPIK 509
RSISPR+ R + +RSYS SP GSR RSLTP++
Sbjct: 174 RSISPREERYDGRRSYSRSPASDGSRGRSLTPVR 207
>gb|AAK93651.1| unknown protein [Arabidopsis thaliana]
Length = 263
Score = 115 bits (289), Expect(2) = 1e-28
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 6/96 (6%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
+PRGFGFVQF+DPADA +AK+ MDG +L+ RELTVVFAEENRKKP+EMRARE G+ +
Sbjct: 75 DPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRD 134
Query: 323 YGR------SYSRSPPCYARRTYSRSNDYYSPPPQQ 412
R S SRSPP R+ SRS DYYSPPP++
Sbjct: 135 RRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRR 170
Score = 37.7 bits (86), Expect(2) = 1e-28
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
Frame = +3
Query: 417 RSISPRDRR-NRKRSYSESPY--GSRSRSLTPIK 509
RSISPR+ R + +RSYS SP GSR RSLTP++
Sbjct: 174 RSISPREERYDGRRSYSRSPASDGSRGRSLTPVR 207
>gb|AAG51556.1|AC027034_2 unknown protein; 47745-45927 [Arabidopsis thaliana]
Length = 220
Score = 115 bits (289), Expect(2) = 1e-28
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 6/96 (6%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
+PRGFGFVQF+DPADA +AK+ MDG +L+ RELTVVFAEENRKKP+EMRARE G+ +
Sbjct: 75 DPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRD 134
Query: 323 YGR------SYSRSPPCYARRTYSRSNDYYSPPPQQ 412
R S SRSPP R+ SRS DYYSPPP++
Sbjct: 135 RRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRR 170
Score = 37.7 bits (86), Expect(2) = 1e-28
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
Frame = +3
Query: 417 RSISPRDRR-NRKRSYSESPY--GSRSRSLTPIK 509
RSISPR+ R + +RSYS SP GSR RSLTP++
Sbjct: 174 RSISPREERYDGRRSYSRSPASDGSRGRSLTPVR 207
>ref|NP_001031195.4| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195102|gb|AEE33223.1| SC35-like splicing factor 33
[Arabidopsis thaliana]
Length = 220
Score = 115 bits (289), Expect(2) = 1e-28
Identities = 60/96 (62%), Positives = 72/96 (75%), Gaps = 6/96 (6%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
+PRGFGFVQF+DPADA +AK+ MDG +L+ RELTVVFAEENRKKP+EMRARE G+ +
Sbjct: 75 DPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGRFRD 134
Query: 323 YGR------SYSRSPPCYARRTYSRSNDYYSPPPQQ 412
R S SRSPP R+ SRS DYYSPPP++
Sbjct: 135 RRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRR 170
Score = 37.7 bits (86), Expect(2) = 1e-28
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
Frame = +3
Query: 417 RSISPRDRR-NRKRSYSESPY--GSRSRSLTPIK 509
RSISPR+ R + +RSYS SP GSR RSLTP++
Sbjct: 174 RSISPREERYDGRRSYSRSPASDGSRGRSLTPVR 207
>ref|NP_001185236.1| SC35-like splicing factor 33 [Arabidopsis thaliana]
gi|332195103|gb|AEE33224.1| SC35-like splicing factor 33
[Arabidopsis thaliana]
Length = 300
Score = 115 bits (288), Expect(2) = 2e-28
Identities = 61/98 (62%), Positives = 74/98 (75%), Gaps = 7/98 (7%)
Frame = +2
Query: 140 REPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARE-----CV 304
R+PRGFGFVQF+DPADA +AK+ MDG +L+ RELTVVFAEENRKKP+EMRARE
Sbjct: 86 RDPRGFGFVQFMDPADAADAKHHMDGYLLLGRELTVVFAEENRKKPTEMRARERGGGSRF 145
Query: 305 RGQAQSYGRSY--SRSPPCYARRTYSRSNDYYSPPPQQ 412
R + ++ R Y SRSPP R+ SRS DYYSPPP++
Sbjct: 146 RDRRRTPPRYYSRSRSPPPRRGRSRSRSGDYYSPPPRR 183
Score = 37.7 bits (86), Expect(2) = 2e-28
Identities = 21/34 (61%), Positives = 26/34 (76%), Gaps = 3/34 (8%)
Frame = +3
Query: 417 RSISPRDRR-NRKRSYSESPY--GSRSRSLTPIK 509
RSISPR+ R + +RSYS SP GSR RSLTP++
Sbjct: 187 RSISPREERYDGRRSYSRSPASDGSRGRSLTPVR 220
>ref|XP_003544854.1| PREDICTED: serine/arginine-rich splicing factor 33 isoform 1
[Glycine max]
Length = 249
Score = 117 bits (292), Expect(2) = 7e-28
Identities = 64/99 (64%), Positives = 72/99 (72%), Gaps = 8/99 (8%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARE------CV 304
EPRGFGFVQ+VDPADA +AKY MDGQ+L+ RELTVVFAEENRKKP+EMR RE
Sbjct: 80 EPRGFGFVQYVDPADAADAKYHMDGQVLLGRELTVVFAEENRKKPTEMRTRERRGRFYDR 139
Query: 305 RGQAQSYGRS--YSRSPPCYARRTYSRSNDYYSPPPQQR 415
R Y RS YSRSPP R+ SRS DYYSPP ++R
Sbjct: 140 RRSPPRYSRSPRYSRSPP-PRHRSRSRSRDYYSPPAKRR 177
Score = 34.3 bits (77), Expect(2) = 7e-28
Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 13/44 (29%)
Frame = +3
Query: 417 RSISPRDRR----------NRKRSYSESP---YGSRSRSLTPIK 509
RS+SP DRR +R+RSYS SP GSRSRS +P K
Sbjct: 181 RSVSPEDRRYSRERSFSQHSRERSYSRSPPYNGGSRSRSQSPAK 224
>gb|ESW17717.1| hypothetical protein PHAVU_007G262600g [Phaseolus vulgaris]
Length = 238
Score = 112 bits (281), Expect(2) = 7e-28
Identities = 63/91 (69%), Positives = 72/91 (79%)
Frame = +2
Query: 143 EPRGFGFVQFVDPADATEAKYQMDGQILIDRELTVVFAEENRKKPSEMRARECVRGQAQS 322
+PRGFGFVQ+VDPADA +AK+ MDGQIL+ RELTVVFAEENRKKPSEMRARE R + +S
Sbjct: 106 DPRGFGFVQYVDPADAADAKHHMDGQILLGRELTVVFAEENRKKPSEMRARE--RRRDRS 163
Query: 323 YGRSYSRSPPCYARRTYSRSNDYYSPPPQQR 415
Y Y RSP RTYS S D YSPPP++R
Sbjct: 164 Y--DYRRSP-----RTYSPSPD-YSPPPRRR 186
Score = 38.5 bits (88), Expect(2) = 7e-28
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +3
Query: 417 RSISPRDRRNRKRSYSESPYGSRSRS 494
RSISPR R+ SYS SPYGSRSRS
Sbjct: 190 RSISPRVRKYSDGSYSRSPYGSRSRS 215