BLASTX nr result

ID: Catharanthus22_contig00030677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00030677
         (383 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anem...    74   2e-11
emb|CBI22055.3| unnamed protein product [Vitis vinifera]               74   2e-11
ref|XP_006481334.1| PREDICTED: Fanconi anemia group D2 protein h...    70   3e-10
ref|XP_002308832.2| hypothetical protein POPTR_0006s02430g [Popu...    69   7e-10
gb|EOX93255.1| Uncharacterized protein TCM_002102 [Theobroma cacao]    64   2e-08
ref|XP_004231232.1| PREDICTED: Fanconi anemia group D2 protein h...    63   4e-08
ref|XP_006347854.1| PREDICTED: Fanconi anemia group D2 protein h...    62   1e-07
gb|EMJ18527.1| hypothetical protein PRUPE_ppa020237mg [Prunus pe...    55   7e-06

>ref|XP_002278254.2| PREDICTED: LOW QUALITY PROTEIN: Fanconi anemia group D2 protein-like
            [Vitis vinifera]
          Length = 1069

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/57 (63%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = +3

Query: 3    PSECTFWMGNLKHKDLMGQVVSSQAYLDDQNESVLHH-TETIVEDQPANPAE*KSKE 170
            PSECTFWMGNLKHKDLMGQVVSSQAY+D QN+++  +  E I EDQ    A  + +E
Sbjct: 1012 PSECTFWMGNLKHKDLMGQVVSSQAYMDHQNDNLDENPEEPIAEDQSTGDASEEDRE 1068


>emb|CBI22055.3| unnamed protein product [Vitis vinifera]
          Length = 1507

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 36/57 (63%), Positives = 43/57 (75%), Gaps = 1/57 (1%)
 Frame = +3

Query: 3    PSECTFWMGNLKHKDLMGQVVSSQAYLDDQNESVLHH-TETIVEDQPANPAE*KSKE 170
            PSECTFWMGNLKHKDLMGQVVSSQAY+D QN+++  +  E I EDQ    A  + +E
Sbjct: 1450 PSECTFWMGNLKHKDLMGQVVSSQAYMDHQNDNLDENPEEPIAEDQSTGDASEEDRE 1506


>ref|XP_006481334.1| PREDICTED: Fanconi anemia group D2 protein homolog isoform X1 [Citrus
            sinensis]
          Length = 1476

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 35/50 (70%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = +3

Query: 6    SECTFWMGNLKHKDLMGQVVSSQAYLDDQNESVLHHTETIV-EDQPANPA 152
            S CTFWMGNLKHKDLMGQVVSSQAY+DD + +V    E  V EDQP +PA
Sbjct: 1424 SGCTFWMGNLKHKDLMGQVVSSQAYVDDLSNNVEEDLEGAVHEDQPISPA 1473


>ref|XP_002308832.2| hypothetical protein POPTR_0006s02430g [Populus trichocarpa]
            gi|550335302|gb|EEE92355.2| hypothetical protein
            POPTR_0006s02430g [Populus trichocarpa]
          Length = 1476

 Score = 68.9 bits (167), Expect = 7e-10
 Identities = 36/58 (62%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
 Frame = +3

Query: 6    SECTFWMGNLKHKDLMGQVVSSQAYLDDQNESVLHH-TETIVEDQPANPAE*KSKENE 176
            S CTFWMGNLKHKDL GQVVSSQAY DDQN +V     E + EDQP + A  + +E E
Sbjct: 1420 SGCTFWMGNLKHKDLTGQVVSSQAYADDQNNNVDEDLAEAVEEDQPVSVAS-EDRETE 1476


>gb|EOX93255.1| Uncharacterized protein TCM_002102 [Theobroma cacao]
          Length = 1482

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +3

Query: 6    SECTFWMGNLKHKDLMGQVVSSQAYLDDQNESVLHHTETI 125
            S CTFWMGNLKHKDL GQVVSSQAY+DD+N+S+    E +
Sbjct: 1427 SGCTFWMGNLKHKDLRGQVVSSQAYVDDRNDSIDQDPEDV 1466


>ref|XP_004231232.1| PREDICTED: Fanconi anemia group D2 protein homolog [Solanum
            lycopersicum]
          Length = 1516

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 31/50 (62%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
 Frame = +3

Query: 6    SECTFWMGNLKHKDLMGQVVSSQAYLDDQNESVLH-HTETIVEDQPANPA 152
            S CTFWMGNLKHK+LMG VVSSQAY+DDQ +++ +  TE +  D+PA+ A
Sbjct: 1465 SGCTFWMGNLKHKNLMGDVVSSQAYVDDQKDNMDNVSTENMDIDEPADIA 1514


>ref|XP_006347854.1| PREDICTED: Fanconi anemia group D2 protein homolog [Solanum
            tuberosum]
          Length = 1503

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 30/50 (60%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = +3

Query: 6    SECTFWMGNLKHKDLMGQVVSSQAYLDDQNESVLH-HTETIVEDQPANPA 152
            S CTFWMGNLKHK+LMG VVSSQAY+DDQ +++ +  TE +  D+P + A
Sbjct: 1452 SGCTFWMGNLKHKNLMGDVVSSQAYVDDQKDNMDNVSTENMDIDEPTDIA 1501


>gb|EMJ18527.1| hypothetical protein PRUPE_ppa020237mg [Prunus persica]
          Length = 1485

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
 Frame = +3

Query: 15   TFWMGNLKHKDLMGQVVSSQAYLDDQNESVLHHTETIVEDQPA-----NPAE*KSKENEK 179
            +FWMGNLKHKDL GQVVSSQ Y+D +++ V        +++PA      PAE   +E  +
Sbjct: 1391 SFWMGNLKHKDLKGQVVSSQVYVDSEDDHVDEEPAEGADEEPAEAADEEPAEAADEEQAE 1450

Query: 180  TRN 188
              N
Sbjct: 1451 AAN 1453


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