BLASTX nr result
ID: Catharanthus22_contig00030557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00030557
(958 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 96 8e-25
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 97 7e-24
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 99 9e-24
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 95 9e-24
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 99 9e-24
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 99 9e-24
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 96 1e-23
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 95 2e-23
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 95 2e-23
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 93 4e-23
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 93 4e-23
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 93 9e-23
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 88 8e-22
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 89 1e-21
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 86 5e-21
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 86 6e-21
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 86 1e-20
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 90 2e-20
emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera] 94 3e-20
gb|AAC98469.1| putative retroelement pol polyprotein [Arabidopsi... 93 4e-20
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 95.5 bits (236), Expect(2) = 8e-25
Identities = 52/88 (59%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLL-SV 777
K GCKWV ++K KSDG++ER+KARLV+LGN+ EGLDY ETFAPVAKM VR L V
Sbjct: 1015 KKALGCKWVFRLKYKSDGTLERHKARLVVLGNNQTEGLDYTETFAPVAKMVTVRAFLQQV 1074
Query: 778 AATDSPQRFLQMDMHNTFLHRDL*EV*Y 861
+ D QMD+HN FLH DL E Y
Sbjct: 1075 VSLD--WEVHQMDVHNAFLHGDLDEEVY 1100
Score = 45.8 bits (107), Expect(2) = 8e-25
Identities = 21/32 (65%), Positives = 24/32 (75%), Gaps = 2/32 (6%)
Frame = +3
Query: 867 PWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
P F G + KVCRL+K Y L+QAPRCWFAKL
Sbjct: 1105 PGFRTGDKTKVCRLRKSLYGLKQAPRCWFAKL 1136
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 96.7 bits (239), Expect(2) = 7e-24
Identities = 52/90 (57%), Positives = 62/90 (68%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV+K K +DGSIERYKARLV+ GN VEG DYNETFAPV KM VRTLL +
Sbjct: 677 KVAIGSQWVYKTKYNADGSIERYKARLVVQGNKQVEGEDYNETFAPVVKMTTVRTLLRLV 736
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A + + + QMD++N FLH DL E Y L
Sbjct: 737 AANQWEVY-QMDVNNAFLHGDLDEEVYMKL 765
Score = 41.6 bits (96), Expect(2) = 7e-24
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F KVCRL+K Y L+QAPRCWF KL
Sbjct: 765 LPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKL 798
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 99.4 bits (246), Expect(2) = 9e-24
Identities = 54/90 (60%), Positives = 62/90 (68%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G KWV+K+K +SDG+IERYKARLV+LGN EG+DY+ETFAPVAKM VR L VA
Sbjct: 997 KRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVA 1056
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A QMD+HN FLH DL E Y L
Sbjct: 1057 AA-RDWHVHQMDVHNAFLHGDLKEEVYMKL 1085
Score = 38.5 bits (88), Expect(2) = 9e-24
Identities = 17/23 (73%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +3
Query: 894 KVCRLQK--YSLEQAPRCWFAKL 956
KVCRL K Y L+QAPRCWF+KL
Sbjct: 1096 KVCRLHKSLYGLKQAPRCWFSKL 1118
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 95.1 bits (235), Expect(2) = 9e-24
Identities = 53/90 (58%), Positives = 58/90 (64%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV+KVK SDGS+ERYKARLV LGN EG DY ETFAPVAKM VR L VA
Sbjct: 862 KRAIGSQWVYKVKHNSDGSVERYKARLVALGNKQKEGEDYGETFAPVAKMATVRLFLDVA 921
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
+ QMD+HN FLH DL E Y L
Sbjct: 922 VKRN-WEIHQMDVHNAFLHGDLREEVYMKL 950
Score = 42.7 bits (99), Expect(2) = 9e-24
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F KVCRL+K Y L+QAPRCWF KL
Sbjct: 950 LPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKL 983
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 99.4 bits (246), Expect(2) = 9e-24
Identities = 54/90 (60%), Positives = 62/90 (68%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G KWV+K+K +SDG+IERYKARLV+LGN EG+DY+ETFAPVAKM VR L VA
Sbjct: 638 KRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVA 697
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A QMD+HN FLH DL E Y L
Sbjct: 698 AA-RDWHVHQMDVHNAFLHGDLKEEVYMKL 726
Score = 38.5 bits (88), Expect(2) = 9e-24
Identities = 17/23 (73%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +3
Query: 894 KVCRLQK--YSLEQAPRCWFAKL 956
KVCRL K Y L+QAPRCWF+KL
Sbjct: 737 KVCRLHKSLYGLKQAPRCWFSKL 759
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 99.4 bits (246), Expect(2) = 9e-24
Identities = 54/90 (60%), Positives = 62/90 (68%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G KWV+K+K +SDG+IERYKARLV+LGN EG+DY+ETFAPVAKM VR L VA
Sbjct: 638 KRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVA 697
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A QMD+HN FLH DL E Y L
Sbjct: 698 AA-RDWHVHQMDVHNAFLHGDLKEEVYMKL 726
Score = 38.5 bits (88), Expect(2) = 9e-24
Identities = 17/23 (73%), Positives = 19/23 (82%), Gaps = 2/23 (8%)
Frame = +3
Query: 894 KVCRLQK--YSLEQAPRCWFAKL 956
KVCRL K Y L+QAPRCWF+KL
Sbjct: 737 KVCRLHKSLYGLKQAPRCWFSKL 759
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 96.3 bits (238), Expect(2) = 1e-23
Identities = 52/87 (59%), Positives = 59/87 (67%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G KWV+K+K SDGSIER K RLVILGN VEG+DYNETFAP AKM V+T L+V
Sbjct: 731 KKAIGSKWVYKIKYNSDGSIERCKTRLVILGNKKVEGIDYNETFAPTAKMVTVQTFLAVV 790
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*Y 861
A QMD+HN FLH +L E Y
Sbjct: 791 AMKG-WELHQMDVHNAFLHGELDEEVY 816
Score = 41.2 bits (95), Expect(2) = 1e-23
Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
+SP F+ KVC L+K Y L+QAP+CWFAKL
Sbjct: 819 MSPGFASPTPGKVCGLRKSLYGLQQAPKCWFAKL 852
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 95.1 bits (235), Expect(2) = 2e-23
Identities = 49/90 (54%), Positives = 62/90 (68%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV+K K +DG++ERYKARLV+ GN+ +EG DY ETFAPV KM VRTLL +
Sbjct: 1020 KVAIGSQWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLV 1079
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A + + + QMD+HN FLH DL E Y L
Sbjct: 1080 AANQWEVY-QMDVHNAFLHGDLEEEVYMKL 1108
Score = 41.6 bits (96), Expect(2) = 2e-23
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F KVCRL+K Y L+QAPRCWF KL
Sbjct: 1108 LPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKL 1141
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 95.1 bits (235), Expect(2) = 2e-23
Identities = 49/90 (54%), Positives = 62/90 (68%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV+K K +DG++ERYKARLV+ GN+ +EG DY ETFAPV KM VRTLL +
Sbjct: 1020 KVAIGSQWVYKTKFNADGTVERYKARLVVQGNNQIEGEDYTETFAPVVKMTTVRTLLRLV 1079
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A + + + QMD+HN FLH DL E Y L
Sbjct: 1080 AANQWEVY-QMDVHNAFLHGDLEEEVYMKL 1108
Score = 41.6 bits (96), Expect(2) = 2e-23
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F KVCRL+K Y L+QAPRCWF KL
Sbjct: 1108 LPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKL 1141
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 93.2 bits (230), Expect(2) = 4e-23
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +1
Query: 619 KWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVAATDSPQ 798
KWV+K+K SDG++ER+KARLV++GN EG+D+ ETFAPVAK+ VRT+L+VAA
Sbjct: 1031 KWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAA-KDW 1089
Query: 799 RFLQMDMHNTFLHRDL*EV*YFLL 870
QMD+HN FLH DL E Y L
Sbjct: 1090 EVHQMDVHNAFLHGDLEEEVYMRL 1113
Score = 42.4 bits (98), Expect(2) = 4e-23
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F KVCRL+K Y L+QAPRCWF+KL
Sbjct: 1113 LPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKL 1146
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 93.2 bits (230), Expect(2) = 4e-23
Identities = 48/84 (57%), Positives = 61/84 (72%)
Frame = +1
Query: 619 KWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVAATDSPQ 798
KWV+K+K SDG++ER+KARLV++GN EG+D+ ETFAPVAK+ VRT+L+VAA
Sbjct: 311 KWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAA-KDW 369
Query: 799 RFLQMDMHNTFLHRDL*EV*YFLL 870
QMD+HN FLH DL E Y L
Sbjct: 370 EVHQMDVHNAFLHGDLEEEVYMRL 393
Score = 42.4 bits (98), Expect(2) = 4e-23
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F KVCRL+K Y L+QAPRCWF+KL
Sbjct: 393 LPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKL 426
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 92.8 bits (229), Expect(2) = 9e-23
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV K K SDG++ERYKARLV+ GN VEG DY ETFAPV +M VRTLL
Sbjct: 1030 KVAIGSQWVFKTKYNSDGTVERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRTLLRNV 1089
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A + + + QMD+HN FLH DL E Y L
Sbjct: 1090 AANQWEVY-QMDVHNAFLHGDLEEEVYMKL 1118
Score = 41.6 bits (96), Expect(2) = 9e-23
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F KVCRL+K Y L+QAPRCWF KL
Sbjct: 1118 LPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKL 1151
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 88.2 bits (217), Expect(2) = 8e-22
Identities = 47/90 (52%), Positives = 61/90 (67%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV++ K S+G IER K+RLV+LGN G+DY+ETF+PVAKM VRT L++A
Sbjct: 990 KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRTFLAIA 1049
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A+ + QMD+HN FLH DL E Y L
Sbjct: 1050 ASKN-WELHQMDVHNAFLHGDLEEEVYMKL 1078
Score = 43.1 bits (100), Expect(2) = 8e-22
Identities = 20/34 (58%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F + VCRL+K Y L+QAPRCWFAKL
Sbjct: 1078 LPPGFERSDPNLVCRLRKSLYGLKQAPRCWFAKL 1111
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 88.6 bits (218), Expect(2) = 1e-21
Identities = 47/90 (52%), Positives = 61/90 (67%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV++ K S+G IER K+RLV+LGN G+DY+ETF+PVAKM MVR L++A
Sbjct: 628 KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTMVRAFLAIA 687
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A+ + QMD+HN FLH DL E Y L
Sbjct: 688 ASKN-WELHQMDVHNAFLHGDLEEEVYMKL 716
Score = 42.0 bits (97), Expect(2) = 1e-21
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F + VCRL+K Y L+QAPRCWF+KL
Sbjct: 716 LPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKL 749
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 86.3 bits (212), Expect(2) = 5e-21
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV++ K S+G IER K+RLV+LGN G+DY+ETF+PVAKM VR L++A
Sbjct: 990 KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIA 1049
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A+ + QMD+HN FLH DL E Y L
Sbjct: 1050 ASKN-WELHQMDVHNAFLHGDLEEEVYMKL 1078
Score = 42.4 bits (98), Expect(2) = 5e-21
Identities = 20/34 (58%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F VCRL+K Y L+QAPRCWFAKL
Sbjct: 1078 LPPGFESSDPNLVCRLRKSLYGLKQAPRCWFAKL 1111
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 86.3 bits (212), Expect(2) = 6e-21
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV++ K S+G IER K+RLV+LGN G+DY+ETF+PVAKM VR L++A
Sbjct: 707 KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIA 766
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A+ + QMD+HN FLH DL E Y L
Sbjct: 767 ASKN-WELHQMDVHNAFLHGDLEEEVYMKL 795
Score = 42.0 bits (97), Expect(2) = 6e-21
Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F + VCRL+K Y L+QAPRCWF+KL
Sbjct: 795 LPPGFERSDPNLVCRLRKSLYGLKQAPRCWFSKL 828
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 86.3 bits (212), Expect(2) = 1e-20
Identities = 46/90 (51%), Positives = 60/90 (66%)
Frame = +1
Query: 601 KYLAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVA 780
K G +WV++ K S+G IER K+RLV+LGN G+DY+ETF+PVAKM VR L++A
Sbjct: 658 KRALGSQWVYRTKYFSNGDIERLKSRLVVLGNHQEAGIDYHETFSPVAKMTTVRAFLAIA 717
Query: 781 ATDSPQRFLQMDMHNTFLHRDL*EV*YFLL 870
A+ + QMD+HN FLH DL E Y L
Sbjct: 718 ASKN-WELHQMDVHNAFLHGDLEEEVYMKL 746
Score = 41.2 bits (95), Expect(2) = 1e-20
Identities = 20/34 (58%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = +3
Query: 861 LSPWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
L P F VCRL K Y L+QAPRCWFAKL
Sbjct: 746 LPPGFESSDPNLVCRLWKSLYGLKQAPRCWFAKL 779
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 90.1 bits (222), Expect(2) = 2e-20
Identities = 46/80 (57%), Positives = 56/80 (70%)
Frame = +1
Query: 613 GCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVAATDS 792
G KWV ++K S+G++ERYKARLV LGN EG+D+ +TFAPV KM+ VR LL VAA
Sbjct: 977 GSKWVFRIKYNSNGTVERYKARLVALGNHQKEGIDFTKTFAPVVKMQTVRLLLDVAAA-K 1035
Query: 793 PQRFLQMDMHNTFLHRDL*E 852
QMD+HN FLH DL E
Sbjct: 1036 DWELHQMDVHNAFLHGDLKE 1055
Score = 36.6 bits (83), Expect(2) = 2e-20
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +3
Query: 867 PWFSKGQERKVCRLQK--YSLEQAPRCWFAKL 956
P F VC+L+K Y L+QAPRCWF KL
Sbjct: 1063 PGFKTTDPSLVCKLKKSIYGLKQAPRCWFEKL 1094
>emb|CAN79142.1| hypothetical protein VITISV_040460 [Vitis vinifera]
Length = 1293
Score = 93.6 bits (231), Expect(2) = 3e-20
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = +1
Query: 607 LAGCKWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVAAT 786
+ GCKW++K+K +SDGS+ERYKARLV G + G+DY ETFAPVA++ VRTLL+VAA
Sbjct: 656 MVGCKWIYKIKTRSDGSVERYKARLVAKGFTQEYGIDYEETFAPVARISSVRTLLAVAAA 715
Query: 787 DSPQRFLQMDMHNTFLHRDL*EV*Y 861
F QMD+ N FL+ DL E Y
Sbjct: 716 RKWDLF-QMDVKNVFLNEDLSEEVY 739
Score = 32.3 bits (72), Expect(2) = 3e-20
Identities = 14/25 (56%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
Frame = +3
Query: 885 QERKVCRLQK--YSLEQAPRCWFAK 953
+ KVC L++ Y L+QAPR WFAK
Sbjct: 749 ESNKVCHLRRALYGLKQAPRVWFAK 773
>gb|AAC98469.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1102
Score = 93.2 bits (230), Expect(2) = 4e-20
Identities = 47/76 (61%), Positives = 58/76 (76%)
Frame = +1
Query: 619 KWVHKVKRKSDGSIERYKARLVILGNS*VEGLDYNETFAPVAKMEMVRTLLSVAATDSPQ 798
KWV+K+K SDG++ER+KARLV++GN EG+D+ ETFAPVAKM VR LL+VAA
Sbjct: 663 KWVYKLKFNSDGTLERHKARLVVMGNHQKEGIDFKETFAPVAKMTTVRLLLAVAAAKDWD 722
Query: 799 RFLQMDMHNTFLHRDL 846
F QMD+HN FLH DL
Sbjct: 723 VF-QMDVHNAFLHGDL 737
Score = 32.3 bits (72), Expect(2) = 4e-20
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 915 YSLEQAPRCWFAKL 956
Y L+QAPRCWFAKL
Sbjct: 743 YGLKQAPRCWFAKL 756