BLASTX nr result
ID: Catharanthus22_contig00030357
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00030357
(967 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A... 85 4e-17
ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein A... 74 7e-17
ref|XP_004292412.1| PREDICTED: putative ribonuclease H protein A... 63 1e-16
ref|XP_002439697.1| hypothetical protein SORBIDRAFT_09g018530 [S... 84 2e-16
ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group] g... 80 1e-15
gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japo... 80 1e-15
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S... 80 1e-15
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 63 4e-15
ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [S... 80 7e-15
gb|EAY97143.1| hypothetical protein OsI_19065 [Oryza sativa Indi... 80 2e-14
ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein A... 60 3e-14
gb|EAZ40914.1| hypothetical protein OsJ_25394 [Oryza sativa Japo... 72 5e-14
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 84 8e-14
ref|XP_002456315.1| hypothetical protein SORBIDRAFT_03g033860 [S... 75 1e-13
gb|EMJ15394.1| hypothetical protein PRUPE_ppa020989mg [Prunus pe... 57 2e-13
gb|AAS98491.1| hypothetical protein [Oryza sativa Japonica Group] 75 4e-13
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 71 6e-13
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608... 67 1e-12
ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein A... 64 1e-12
ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [S... 80 2e-12
>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
italica]
Length = 950
Score = 84.7 bits (208), Expect(2) = 4e-17
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 7/152 (4%)
Frame = +2
Query: 299 RDREMIWHYNKDGEFTGRSANHMGMKCMELGAIGRTSSGPTDQSAKS------MWSSVWE 460
RD + WH+++ G F+ RSA HM + E + G + + W +W+
Sbjct: 572 RDDVIAWHHDRKGMFSVRSAYHMLVD--EERRQRKYQQGESSVCCREGDHETQKWKKLWK 629
Query: 461 VHAPPKVQHTIWRACNNILPNRANLKRR-IIMDYICPRCHRDTESNGHLFF*CSWAKEIW 637
+ PPKV+H IWR +N LP + N+KRR + +D CP C R E GH F C K W
Sbjct: 630 LPCPPKVRHFIWRLAHNSLPLKQNIKRRGVFLDTRCPVCMRFDEDGGHCFLKCKLIKRCW 689
Query: 638 AV*GRSISQILQFRVESCKDFV*EMLNRRTEL 733
+ +++ +S KDFV +L L
Sbjct: 690 RILEMEQTRLALLSSKSSKDFVWNVLQLEQSL 721
Score = 30.8 bits (68), Expect(2) = 4e-17
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +1
Query: 760 ILMWVIWTSRNSLLFEQKYRNPDEVVEKSIAL--MKEFPKACQEIFILAPTERVREHQQW 933
+L+W W RN + +N V + + + E P + PT R++ Q+W
Sbjct: 727 LLLWKWWDVRNKVNAGDPIQNIQNVCHSVLEMAGLLELPT-----IKIRPTARLQ--QRW 779
Query: 934 MKPPPGRLKVS 966
++PP G LK++
Sbjct: 780 LRPPQGVLKIN 790
>ref|XP_004298270.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 393
Score = 74.3 bits (181), Expect(2) = 7e-17
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +2
Query: 308 EMIWHYNKDGEFTGRSANHMGMKCMELGAIGRTSSGPTDQSAKSMWSSVWEVHAPPKVQH 487
++ WHY+K G + +S H+ + + +SSG + W +W+ + PPKV+
Sbjct: 7 KLFWHYDKHGVYQVKSGYHI-TRITDQTVGCASSSGTVGPGSGGCWKKIWQANVPPKVRS 65
Query: 488 TIWRACNNILPNRANLKRRI-IMDYICPRCHRDTESNGHLFF*CSWAKEIW 637
IWR C ++P RA L RR+ I D C C + E+ HLF C + W
Sbjct: 66 FIWRLCLEVIPTRAALSRRLFITDVRCIFCGNEVETGLHLFRDCPVVQSFW 116
Score = 40.4 bits (93), Expect(2) = 7e-17
Identities = 18/70 (25%), Positives = 36/70 (51%)
Frame = +1
Query: 757 FILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQWM 936
F+ +W +W RN++++ NP + ++ L++E+ K + + R +W
Sbjct: 153 FMALWTVWIERNNMIWRGGSCNPSNMSVWAMQLLEEYKK----VHTKPSVKMKRPRAKWC 208
Query: 937 KPPPGRLKVS 966
PP GRLK++
Sbjct: 209 CPPSGRLKLN 218
>ref|XP_004292412.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 369
Score = 62.8 bits (151), Expect(2) = 1e-16
Identities = 38/122 (31%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Frame = +2
Query: 284 SLFLERDREMIWHYNKDGEFTGRSANHMG--MKCMELGAIGRTSSGPTDQSAKSMWSSVW 457
SL+ DR ++WH++K G +T +S ++G ++ +E A+G S + +W +W
Sbjct: 12 SLYRGEDR-LVWHFDKKGCYTVKSGYYVGRLVEGLEKQALGSDSGVKRGR----LWCKLW 66
Query: 458 EVHAPPKVQHTIWRACNNILPNRANL--KRRIIMDYICPRCHRDTESNGHLFF*CSWAKE 631
PPKV+ WR LP RA L K+ + D C C E + HLF C+ +
Sbjct: 67 SAQVPPKVRMHGWRLAQGTLPTRAALIKKKAQLPDVSCVFCLNSVEDSLHLFKNCNALRA 126
Query: 632 IW 637
W
Sbjct: 127 FW 128
Score = 51.2 bits (121), Expect(2) = 1e-16
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 754 AFIL-MWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQ 930
AF++ +WVIW RN++++ KY N + E SI L++E+ + Q + +++ R +
Sbjct: 163 AFLMTLWVIWVERNNMVWRGKYYNAANMFEWSITLLREYKECHQH----SGSKKKRAISK 218
Query: 931 WMKPPPGRLKVS 966
W PP GRLKV+
Sbjct: 219 WSCPPRGRLKVN 230
>ref|XP_002439697.1| hypothetical protein SORBIDRAFT_09g018530 [Sorghum bicolor]
gi|241944982|gb|EES18127.1| hypothetical protein
SORBIDRAFT_09g018530 [Sorghum bicolor]
Length = 381
Score = 84.3 bits (207), Expect(2) = 2e-16
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 3/150 (2%)
Frame = +2
Query: 293 LERDREMIWHYNKDGEFTGRSANHMGMKCMELGAIGRT--SSGPTDQSAKSMWSSVWEVH 466
++R+ + WH+NK G F+ +SA H+ E + + SS S + MW +W V
Sbjct: 1 MDREDSVAWHFNKKGVFSVKSAYHVLEDEAESKLVRQRGESSRHLLDSRQQMWKKLWGVP 60
Query: 467 APPKVQHTIWRACNNILPNRANLK-RRIIMDYICPRCHRDTESNGHLFF*CSWAKEIWAV 643
PPK++ +WR +N L ++ N+K ++I +D CP C R E H FF C +++W
Sbjct: 61 GPPKIKQCVWRVAHNSLAHKMNIKSKKISLDTRCPVCLRYDEDGAHCFFKCKDVRKVWRE 120
Query: 644 *GRSISQILQFRVESCKDFV*EMLNRRTEL 733
G ++ + S + V E+L +R ++
Sbjct: 121 LGMEDLRLKLANLLSAMEVVAEILRQRKDM 150
Score = 28.5 bits (62), Expect(2) = 2e-16
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +1
Query: 757 FILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFI----LAPTERVREH 924
F+L+W W+ RN + N E++ + Q I + + ++
Sbjct: 155 FVLIWKWWSVRNKV-------NKGELMSSAQTTTSAIQDMVQNILKEGCKMNHNQALQVQ 207
Query: 925 QQWMKPPPGRLKVS 966
Q WM P G+LK++
Sbjct: 208 QSWMPPTEGKLKIN 221
>ref|NP_001060259.1| Os07g0613900 [Oryza sativa Japonica Group]
gi|113611795|dbj|BAF22173.1| Os07g0613900 [Oryza sativa
Japonica Group]
Length = 1453
Score = 79.7 bits (195), Expect(2) = 1e-15
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Frame = +2
Query: 242 LVWTFLLHSMSVLSSL--FLERDREMIWHYNKDGEFTGRSANHMGMKCMELGAIGRTSSG 415
L TF ++++ ++ +E D + WHY++ G F+ +SA + + EL R S+G
Sbjct: 1107 LTQTFWPEDVNMIRTIPVHIEMDDMLAWHYDEKGLFSVKSAYKV-QRDGELQRRKRGSAG 1165
Query: 416 PTDQSAKS--MWSSVWEVHAPPKVQHTIWRACNNILPNRANLKRR-IIMDYICPRCHRDT 586
++ S + W VW++ P KV+H IWR +NIL R NL++R + +D C C+R
Sbjct: 1166 LSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMN 1225
Query: 587 ESNGHLFF*CSWAKEIW 637
E GHLFF C K++W
Sbjct: 1226 EDAGHLFFKCKKVKKVW 1242
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 754 AFILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQW 933
A I +W W+ RN + ++ R+P E+ AL +E+ K ++ AP+ +++W
Sbjct: 1278 ASITLWQWWSERNRVQEGERGRSPSELGFIIAALAEEYMKLNKKDSKRAPS----RNEKW 1333
Query: 934 MKPPPGRLKVS 966
+ G +K++
Sbjct: 1334 SRTDQGVMKIN 1344
>gb|EAZ40645.1| hypothetical protein OsJ_25114 [Oryza sativa Japonica Group]
Length = 560
Score = 79.7 bits (195), Expect(2) = 1e-15
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 5/137 (3%)
Frame = +2
Query: 242 LVWTFLLHSMSVLSSL--FLERDREMIWHYNKDGEFTGRSANHMGMKCMELGAIGRTSSG 415
L TF ++++ ++ +E D + WHY++ G F+ +SA + + EL R S+G
Sbjct: 214 LTQTFWPEDVNMIRTIPVHIEMDDMLAWHYDEKGLFSVKSAYKV-QRDGELQRRKRGSAG 272
Query: 416 PTDQSAKS--MWSSVWEVHAPPKVQHTIWRACNNILPNRANLKRR-IIMDYICPRCHRDT 586
++ S + W VW++ P KV+H IWR +NIL R NL++R + +D C C+R
Sbjct: 273 LSNGSTEREMYWKKVWKMQLPGKVKHFIWRFSHNILALRVNLQQRGMDLDSRCIICNRMN 332
Query: 587 ESNGHLFF*CSWAKEIW 637
E GHLFF C K++W
Sbjct: 333 EDAGHLFFKCKKVKKVW 349
Score = 30.8 bits (68), Expect(2) = 1e-15
Identities = 18/71 (25%), Positives = 37/71 (52%)
Frame = +1
Query: 754 AFILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQW 933
A I +W W+ RN + ++ R+P E+ AL +E+ K ++ AP+ +++W
Sbjct: 385 ASITLWQWWSERNRVQEGERGRSPSELGFIIAALAEEYMKLNKKDSKRAPS----RNEKW 440
Query: 934 MKPPPGRLKVS 966
+ G +K++
Sbjct: 441 SRTDQGVMKIN 451
>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
gi|241920472|gb|EER93616.1| hypothetical protein
SORBIDRAFT_01g011130 [Sorghum bicolor]
Length = 463
Score = 80.1 bits (196), Expect(2) = 1e-15
Identities = 41/121 (33%), Positives = 64/121 (52%), Gaps = 2/121 (1%)
Frame = +2
Query: 299 RDREMIWHYNKDGEFTGRSANHMGMKCMELGAIGRTSSGPTDQSAKSMWSSVWEVHAPPK 478
R + WHY+K G F+ +SA + + G ++ S+W VW++ P K
Sbjct: 94 RSNMVAWHYDKHGVFSVKSAYKVARDTYIRNHTSQGQQGGSNPGPLSLWKRVWKLSCPNK 153
Query: 479 VQHTIWRACNNILPNRANLKRRIIMDYI--CPRCHRDTESNGHLFF*CSWAKEIWAV*GR 652
++H +WR +N P R NL RR M+ + CP C++ E GHLFF C A+++W + G
Sbjct: 154 IKHFLWRFLHNSHPLRDNLIRR-GMEIVPRCPVCNQVGEDGGHLFFKCGMARQVWELLGL 212
Query: 653 S 655
S
Sbjct: 213 S 213
Score = 30.4 bits (67), Expect(2) = 1e-15
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 760 ILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQ-QWM 936
+ +W W+ RN++ E + R+P + + + + L + + + PT + Q +W
Sbjct: 245 VALWYTWSERNAIREEDRRRSP-QTLARCVELYVQEMRTTET--TANPTANQEQQQYKWS 301
Query: 937 KPPPGRLKVS 966
KPP LK++
Sbjct: 302 KPPVDILKLN 311
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 62.8 bits (151), Expect(2) = 4e-15
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)
Frame = +2
Query: 308 EMIWHYNKDGEFTGRSAN-HMGMKCMELGAIGRTSSGPTDQSAKSMWSSVWEVHAPPKVQ 484
+ +W +K+G+FT RSA H ++ + G TS GP +W +W+ PPKV+
Sbjct: 1011 QWMWMMSKNGQFTVRSAYYHELLEDRKTGP--STSRGPN----LKLWQKIWKAKIPPKVK 1064
Query: 485 HTIWRACNNILPNRANLKRR-IIMDYICPRCHRDTESNGHLFF*CSWAKEIWAV 643
W+A +N L N+++R + +D CPRC E+ HL + C + W +
Sbjct: 1065 LFSWKAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYI 1118
Score = 45.8 bits (107), Expect(2) = 4e-15
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = +1
Query: 757 FILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQ-W 933
+++ W IW RN +FE+K EVVE+++ + EF + C +P E + H+ W
Sbjct: 1154 WMICWNIWLGRNKWVFEKKKLAFQEVVERAVRGVMEFEEECAH---TSPVETLNTHENGW 1210
Query: 934 MKPPPGRLKVS 966
PP G +K++
Sbjct: 1211 SVPPVGMVKLN 1221
>ref|XP_002449769.1| hypothetical protein SORBIDRAFT_05g022920 [Sorghum bicolor]
gi|241935612|gb|EES08757.1| hypothetical protein
SORBIDRAFT_05g022920 [Sorghum bicolor]
Length = 705
Score = 80.5 bits (197), Expect(2) = 7e-15
Identities = 44/143 (30%), Positives = 76/143 (53%), Gaps = 2/143 (1%)
Frame = +2
Query: 317 WHYNKDGEFTGRSANHMGMKCMELGA-IGRTSSGPTDQSAKSMWSSVWEVHAPPKVQHTI 493
WH++K G F +SA + L + G SS +DQ ++W +W+++ KV+H +
Sbjct: 403 WHFDKKGIFLVKSAYKVYRANTILSSRSGGASSSGSDQQKNAVWGKIWKLNCANKVKHFM 462
Query: 494 WRACNNILPNRANLKRR-IIMDYICPRCHRDTESNGHLFF*CSWAKEIWAV*GRSISQIL 670
WR C+N P R NLKRR + +D C C+R E HLF C K +W + + + L
Sbjct: 463 WRFCHNSHPLRMNLKRRHVDIDTKCVVCNRFDEDGAHLFMKCKPMKRVWQLLNMNELREL 522
Query: 671 QFRVESCKDFV*EMLNRRTELKN 739
S ++ V E++ ++ ++++
Sbjct: 523 LMSKRSAREVVEEIMIQKEDIQS 545
Score = 27.3 bits (59), Expect(2) = 7e-15
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 760 ILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEF 867
IL+W+ W+ RN + + R+P+ + S + +E+
Sbjct: 549 ILLWICWSERNRIREGEHSRDPEILAHLSRVIAEEW 584
>gb|EAY97143.1| hypothetical protein OsI_19065 [Oryza sativa Indica Group]
Length = 257
Score = 79.7 bits (195), Expect(2) = 2e-14
Identities = 48/141 (34%), Positives = 69/141 (48%), Gaps = 3/141 (2%)
Frame = +2
Query: 317 WHYNKDGEFTGRSANHMGMKCMELGAIGRT--SSGPTDQSAKSMWSSVWEVHAPPKVQHT 490
WH++ G FT +SA H E A +T SS ++A W +W +H PKV+H
Sbjct: 25 WHFDPRGIFTVKSAYHTLEDQREHLASRQTGESSSGVARTASLDWGKLWRLHYFPKVKHF 84
Query: 491 IWRACNNILPNRANLKRR-IIMDYICPRCHRDTESNGHLFF*CSWAKEIWAV*GRSISQI 667
+W +N LP R N+ RR + +D CP CHR E GH FF C + K W V ++
Sbjct: 85 LWCFAHNTLPLRMNIDRRGMEIDTRCPVCHRLNEDGGHCFFKCKYVKAGWRVMNLKHIRL 144
Query: 668 LQFRVESCKDFV*EMLNRRTE 730
+ S D +LN + +
Sbjct: 145 ELMQYSSALDVCKHILNMKED 165
Score = 26.9 bits (58), Expect(2) = 2e-14
Identities = 15/72 (20%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 760 ILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTE---RVREHQQ 930
+ +W W +RN + + R+ ++V ++ + ++ E +L+P + V+ ++
Sbjct: 172 LFLWNWWDARNKVNAGEDRRSAEQVYDRVMRMV-------SETSLLSPAKSRPNVQAQRK 224
Query: 931 WMKPPPGRLKVS 966
W P G LK++
Sbjct: 225 WHPPILGELKLN 236
>ref|XP_004301010.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 735
Score = 60.5 bits (145), Expect(2) = 3e-14
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = +2
Query: 284 SLFLERDREMIWHYNKDGEFTGRSANHMGMKCMELGAIGRTSSGPTDQSAKS-MWSSVWE 460
SL+ DR ++WH++K G +T +S ++G + + + +SG + + +W +W
Sbjct: 216 SLYGGEDR-LVWHFDKKGCYTVKSGYYVGRL---VEGLEKQASGSDSRVKRGRLWCKLWS 271
Query: 461 VHAPPKVQHTIWRACNNILPNRANL--KRRIIMDYICPRCHRDTESNGHLFF*CSWAKEI 634
PPKV WR LP RA L K+ + D C C E + HLF C+ +
Sbjct: 272 AQVPPKVHMHGWRLAQGTLPTRAALIKKKAQLPDVSCVFCLNSVEDSLHLFKNCNALRAF 331
Query: 635 W 637
W
Sbjct: 332 W 332
Score = 45.4 bits (106), Expect(2) = 3e-14
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +1
Query: 754 AFIL-MWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQ 930
AF++ +WVIW RN++++ KY N + E S L++E+ + Q + +++ R +
Sbjct: 367 AFLMALWVIWVERNNMVWRGKYYNAANMFEWSTTLLREYKECHQH----SGSKKKRAISK 422
Query: 931 WMKPPPGRLKVS 966
W P GRLKV+
Sbjct: 423 WSCLPRGRLKVN 434
>gb|EAZ40914.1| hypothetical protein OsJ_25394 [Oryza sativa Japonica Group]
gi|218200166|gb|EEC82593.1| hypothetical protein
OsI_27152 [Oryza sativa Indica Group]
Length = 298
Score = 71.6 bits (174), Expect(2) = 5e-14
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Frame = +2
Query: 296 ERDREMIWHYNKDGEFTGRSANHMGMKCMELGA---IGRTSSGPTDQSAKSMWSSVWEVH 466
+ D + WH++ G ++ +SA H+ E A +G +SSG Q W +W +
Sbjct: 75 DTDDFVAWHFDTRGMYSVKSAYHVLEDQRERSAKKQVGDSSSGAVHQR-NFEWDKIWSLQ 133
Query: 467 APPKVQHTIWRACNNILPNRANLKRRI-IMDYICPRCHRDTESNGHLFF*CSWAKEIWAV 643
PKV+ IWR +N LP + N+KRR+ +CP C R E+ GH F C K W +
Sbjct: 134 CIPKVKLFIWRLAHNSLPLKINIKRRVPDAKTLCPVCKRFDENGGHCFLKCKPMKLCWRI 193
Query: 644 *GRSISQILQFRVESCKDFV*EMLNRRTELKNE 742
++ ++ S +D V +L + + E
Sbjct: 194 LCLEDIRLSLIQLVSARDVVQTILKLEDDRRME 226
Score = 33.5 bits (75), Expect(2) = 5e-14
Identities = 20/70 (28%), Positives = 36/70 (51%)
Frame = +1
Query: 757 FILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQWM 936
F L+WV W +RN + ++ +EVV K L+ ++ ++ P V + +W+
Sbjct: 228 FFLLWVWWYARNKVKSGEEVIRVEEVVHKVKLLVYDYASMRKD---KRPHVNV-QRNKWV 283
Query: 937 KPPPGRLKVS 966
P GRLK++
Sbjct: 284 PPVDGRLKLN 293
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 84.0 bits (206), Expect = 8e-14
Identities = 41/108 (37%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Frame = +2
Query: 317 WHYNKDGEFTGRSANHMGMKCMELGAIGRTSSGPTDQSAKSMWSSVWEVHAPPKVQHTIW 496
W Y DG ++ +S H+ K + S P + SA+++++++W+ +APPK++H W
Sbjct: 458 WIYTHDGNYSVKSGYHLLRKLSQQQHASLPS--PNEVSAQTVFTNIWKQNAPPKIKHFWW 515
Query: 497 RACNNILPNRANLK-RRIIMDYICPRCHRDTESNGHLFF*CSWAKEIW 637
R+ +N LP NLK RR+I D C RC +E HL F C +KEIW
Sbjct: 516 RSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKEIW 563
>ref|XP_002456315.1| hypothetical protein SORBIDRAFT_03g033860 [Sorghum bicolor]
gi|241928290|gb|EES01435.1| hypothetical protein
SORBIDRAFT_03g033860 [Sorghum bicolor]
Length = 397
Score = 74.7 bits (182), Expect(2) = 1e-13
Identities = 44/154 (28%), Positives = 75/154 (48%), Gaps = 6/154 (3%)
Frame = +2
Query: 293 LERDREMIWHYNKDGEFTGRSANHMGMKCMELGAIGRT----SSGPTDQSAKSMWSSVWE 460
LE D + WHY+ G F+ +SA + C + + SS + +W +W+
Sbjct: 21 LEMDDILAWHYDPKGLFSVKSAYRVC--CDDQNRRSKNDWAASSSSNGDGNEKVWRLIWD 78
Query: 461 VHAPPKVQHTIWRACNNILPNRANLKRRIIM--DYICPRCHRDTESNGHLFF*CSWAKEI 634
+ AP +++H +WR +N L R NLK R + D C C+R E HLF C A+E+
Sbjct: 79 MQAPSRLKHFLWRLAHNSLALRLNLKHRGVQVEDDRCIMCNRLGEDGAHLFLKCKQAREL 138
Query: 635 WAV*GRSISQILQFRVESCKDFV*EMLNRRTELK 736
W+ G +++ + ++ + +ML EL+
Sbjct: 139 WSRMGLEETRLNMVNCATAREAIQKMLTMGDELQ 172
Score = 28.9 bits (63), Expect(2) = 1e-13
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +1
Query: 778 WTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQWMKPPPGRL 957
W RN + ++ R+ D++ S E K + I + + R ++W KPP G L
Sbjct: 183 WQERNQVREGKRRRSLDDIANLSGRQAIEISKLQKVIQSVPRAQATR--RRWEKPPSGML 240
Query: 958 KVS 966
KV+
Sbjct: 241 KVN 243
>gb|EMJ15394.1| hypothetical protein PRUPE_ppa020989mg [Prunus persica]
Length = 489
Score = 56.6 bits (135), Expect(2) = 2e-13
Identities = 33/116 (28%), Positives = 59/116 (50%), Gaps = 5/116 (4%)
Frame = +2
Query: 311 MIWHYNKDGEFTGRSANHMGMKCM--ELGAIGRTSSGPTDQSAKSMWSSVWEVHAPPKVQ 484
+IWH+ + G++T RS++ + + + + T+ GP + + +W +W+ PPKV+
Sbjct: 200 LIWHFERGGQYTVRSSHEVACRVLLQQDRDDTNTNEGPI-VAFEHVWKKIWKARVPPKVR 258
Query: 485 HTIWRACNNILPNRANLKRRIIMD---YICPRCHRDTESNGHLFF*CSWAKEIWAV 643
IW A NILP + NL +I + Y+ C D E+ H+ C W++
Sbjct: 259 IFIWHALLNILPTKDNLIHHVISELGGYVF--CGAD-ETVAHVLLRCPMTITSWSL 311
Score = 46.6 bits (109), Expect(2) = 2e-13
Identities = 19/69 (27%), Positives = 39/69 (56%)
Frame = +1
Query: 760 ILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQWMK 939
+ +W++W RN + + + R+ E+V ++ ++EF QE+ T R +W++
Sbjct: 347 VCLWMLWYERNQMAWAGRQRSATEIVSGAMHYLQEF----QEVHPRPKTHTSRAIAKWVR 402
Query: 940 PPPGRLKVS 966
PPPG +K++
Sbjct: 403 PPPGAIKIN 411
>gb|AAS98491.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 488
Score = 75.1 bits (183), Expect(2) = 4e-13
Identities = 47/135 (34%), Positives = 66/135 (48%), Gaps = 3/135 (2%)
Frame = +2
Query: 335 GEFTGRSANHMGMKCMELGAIGRT--SSGPTDQSAKSMWSSVWEVHAPPKVQHTIWRACN 508
G FT +SA H E A +T SS ++A W +W +H PKV+H +WR +
Sbjct: 170 GIFTVKSAYHTLEDQREHLASRQTGESSSGVARTASLDWGKLWRLHYFPKVKHFLWRFAH 229
Query: 509 NILPNRANLKRR-IIMDYICPRCHRDTESNGHLFF*CSWAKEIWAV*GRSISQILQFRVE 685
N LP R N+ RR + +D CP CHR E GH FF C + K W V ++ +
Sbjct: 230 NTLPLRMNIDRRGMEIDTRCPVCHRLNEDGGHCFFKCKYVKAGWRVMNLKHIRLELMQYS 289
Query: 686 SCKDFV*EMLNRRTE 730
S D +LN + +
Sbjct: 290 SALDVCKHILNMKED 304
Score = 26.9 bits (58), Expect(2) = 4e-13
Identities = 15/72 (20%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +1
Query: 760 ILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTE---RVREHQQ 930
+ +W W +RN + + R+ ++V ++ + ++ E +L+P + V+ ++
Sbjct: 311 LFLWNWWDARNKVNAGEDRRSAEQVYDRVMRMV-------SETSLLSPAKSRPNVQAQRK 363
Query: 931 WMKPPPGRLKVS 966
W P G LK++
Sbjct: 364 WHPPILGELKLN 375
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 71.2 bits (173), Expect(2) = 6e-13
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 6/144 (4%)
Frame = +2
Query: 236 DSLVWTFLLHSMSVLSSLFLER---DREMIWHYNKDGEFTGRSANHMGMKCMELGAIG-- 400
+S+ TF+ ++ S+ L R D W +++G F+ RS C LG +G
Sbjct: 978 ESVQQTFVEEEWELVLSIPLSRFLPDDHRYWWPSRNGIFSVRS-------CYWLGRLGPV 1030
Query: 401 RTSSGPTDQSAKSMWSSVWEVHAPPKVQHTIWRACNNILPNRANL-KRRIIMDYICPRCH 577
RT + +W VW++ PPK+ H +WRAC L + L R I +D C C
Sbjct: 1031 RTWQLQHGERETELWRRVWQLQGPPKLSHFLWRACKGSLAVKGRLFSRHISVDATCSVCG 1090
Query: 578 RDTESNGHLFF*CSWAKEIWAV*G 649
ES H F C++A+ IW V G
Sbjct: 1091 DPDESINHALFDCTFARAIWQVSG 1114
Score = 30.0 bits (66), Expect(2) = 6e-13
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +1
Query: 766 MWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQWMKPP 945
MW W RN L+FE + + V ++ L+ ++ + +F W PP
Sbjct: 1150 MWAGWFCRNKLIFENELSDAPLVAKRFSKLVADYCEYAGSVF-RGSGGGCGSSALWSPPP 1208
Query: 946 PGRLKVS 966
G KV+
Sbjct: 1209 TGMFKVN 1215
>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
Length = 1570
Score = 66.6 bits (161), Expect(2) = 1e-12
Identities = 31/114 (27%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +2
Query: 308 EMIWHYNKDGEFTGRSANHMGMKCMELGAIGRTSSGPTDQS-AKSMWSSVWEVHAPPKVQ 484
E+IWHY++ +++ +S + + + + PT + +++ W+++W + P K++
Sbjct: 914 EVIWHYDRKCQYSVKSGYQIALNL-------KFPAKPTSSATSENQWNAIWLLTLPEKIR 966
Query: 485 HTIWRACNNILPNRANL-KRRIIMDYICPRCHRDTESNGHLFF*CSWAKEIWAV 643
WRA N+LP+ NL KR++I + +C C++ E+ H C K+IW +
Sbjct: 967 IFAWRAAKNLLPSAENLWKRKVIQEPLCQFCNKKLETIFHALVGCKVVKKIWKI 1020
Score = 33.9 bits (76), Expect(2) = 1e-12
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +1
Query: 763 LMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQWMKP 942
++W+IW ++NS +F+ +P V K+ A+++ F + + + + W P
Sbjct: 1057 ILWMIWNAQNSWIFKGVKDSPHVTVSKAEAVLEAFRRTQLPAATHIDIQSSSKLKAWKPP 1116
Query: 943 PPGRLKVS 966
G KV+
Sbjct: 1117 QRGHFKVN 1124
>ref|XP_006492478.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Citrus sinensis] gi|568879016|ref|XP_006492479.1|
PREDICTED: putative ribonuclease H protein
At1g65750-like isoform X2 [Citrus sinensis]
Length = 320
Score = 63.9 bits (154), Expect(2) = 1e-12
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 299 RDREMIWHYNKDGEFTGRSANHMGMKCMELGAIGRTSSGPTDQSAKSMWSSVWEVHAPPK 478
++ E++WHY+K G ++ +S + I + S W ++W++ P K
Sbjct: 10 KEDELLWHYDKKGNYSVKSGYQLAF------TIKFPNKPCYSNSDFQGWQTIWKLGNPEK 63
Query: 479 VQHTIWRACNNILPNRANL-KRRIIMDYICPRCHRDTESNGHLFF*CSWAKEIW 637
V+ +WR N+LP NL KR+++ + IC C ++ E+ H AK++W
Sbjct: 64 VKIFLWRTTKNLLPTMENLWKRKVVQEPICQICKKELENISHALLDYKLAKKMW 117
Score = 36.2 bits (82), Expect(2) = 1e-12
Identities = 18/71 (25%), Positives = 33/71 (46%)
Frame = +1
Query: 754 AFILMWVIWTSRNSLLFEQKYRNPDEVVEKSIALMKEFPKACQEIFILAPTERVREHQQW 933
A + W +W +RN +++E+K + K A+M+ + + + RE QW
Sbjct: 153 ASFVWWGVWNARNKVIYERKKPELAISIAKVTAVMEAYQRVKEPEQQQLKQSEPRETHQW 212
Query: 934 MKPPPGRLKVS 966
PP G K++
Sbjct: 213 EPPPEGWHKIN 223
>ref|XP_002444973.1| hypothetical protein SORBIDRAFT_07g002160 [Sorghum bicolor]
gi|241941323|gb|EES14468.1| hypothetical protein
SORBIDRAFT_07g002160 [Sorghum bicolor]
Length = 469
Score = 79.7 bits (195), Expect = 2e-12
Identities = 42/118 (35%), Positives = 61/118 (51%), Gaps = 4/118 (3%)
Frame = +2
Query: 296 ERDREMIWHYNKDGEFTGRSANHMGMKCMELGA---IGRTSSGPTDQSAKSMWSSVWEVH 466
E + + WHY+ G+F+ +SA H+ EL IG S+ + W +W++H
Sbjct: 161 EMEDTLAWHYDPKGDFSVKSAYHVLTDMKELSKRRQIGEASASLISP-CNNNWHKIWKLH 219
Query: 467 APPKVQHTIWRACNNILPNRANLKRR-IIMDYICPRCHRDTESNGHLFF*CSWAKEIW 637
PPKV+ WR +N LP R N+ RR + +D CP C R E GH F C + K+ W
Sbjct: 220 CPPKVKLFFWRFTHNSLPLRMNILRRGMDIDTRCPVCWRLNEDGGHCFLRCKFVKKCW 277