BLASTX nr result
ID: Catharanthus22_contig00030280
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00030280
(275 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S... 45 2e-09
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 41 4e-09
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A... 41 1e-07
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta... 40 1e-07
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 34 2e-07
ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein A... 37 2e-07
gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus pe... 35 3e-07
gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse ... 35 4e-07
gb|AAP54617.2| retrotransposon protein, putative, unclassified [... 35 4e-07
gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japo... 39 4e-07
gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japo... 35 4e-07
gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [... 37 4e-07
ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein A... 35 5e-07
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas... 36 7e-07
gb|EOY13397.1| Uncharacterized protein TCM_031959 [Theobroma cacao] 45 8e-07
gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japo... 40 9e-07
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 36 1e-06
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 34 1e-06
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 34 1e-06
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 34 1e-06
>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
gi|241943773|gb|EES16918.1| hypothetical protein
SORBIDRAFT_08g007680 [Sorghum bicolor]
Length = 649
Score = 45.4 bits (106), Expect(3) = 2e-09
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
+V+FSI +NG+PT +F PTRGI Q DP+SP
Sbjct: 172 TVSFSIRVNGVPTQSFRPTRGIRQGDPISP 201
Score = 31.2 bits (69), Expect(3) = 2e-09
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = -2
Query: 91 PSISHLLFVDD*LLFARADELQAFKLREI 5
P ISHLLF DD ++F+ A + A +L EI
Sbjct: 234 PWISHLLFADDSIVFSEASQRGAERLMEI 262
Score = 30.0 bits (66), Expect(3) = 2e-09
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRT 135
PYLF+LC EGLS LL++
Sbjct: 201 PYLFLLCSEGLSCLLKS 217
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 41.2 bits (95), Expect(3) = 4e-09
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
S FS+L+NG P+ F P+RG+ Q DPLSP
Sbjct: 621 SARFSVLVNGQPSRNFFPSRGLRQGDPLSP 650
Score = 35.4 bits (80), Expect(3) = 4e-09
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
P+LF++C EGLSTLLR ++E + +
Sbjct: 650 PFLFVVCAEGLSTLLRDAEEKKVI 673
Score = 28.9 bits (63), Expect(3) = 4e-09
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -2
Query: 130 KKMKLSRYRIRNRPS-ISHLLFVDD*LLFARADELQAFKLREI 5
+K + +I +R S ISHL F DD LLF RA E + + +I
Sbjct: 669 EKKVIHGVKIGHRVSPISHLFFADDSLLFIRATEEEVENVMDI 711
>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 888
Score = 41.2 bits (95), Expect(3) = 1e-07
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
SV +SIL+NG PT P+RGI Q DPLSP
Sbjct: 180 SVQYSILLNGKPTEVISPSRGIRQGDPLSP 209
Score = 32.0 bits (71), Expect(3) = 1e-07
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETLK 111
PYLFILC EGLS+L+ + T+K
Sbjct: 209 PYLFILCAEGLSSLISKVVADYTIK 233
Score = 27.3 bits (59), Expect(3) = 1e-07
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -2
Query: 133 LKKMKLSRYRIRNRPSISHLLFVDD*LLF--ARADELQAFK 17
+K +KLS P + HL F DD +F A ADE Q F+
Sbjct: 232 IKGLKLSP----QAPILHHLFFADDSFIFGAAEADECQRFR 268
>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 773
Score = 39.7 bits (91), Expect(3) = 1e-07
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
+ T+SILING P +P RGI Q DP+SP
Sbjct: 67 TTTYSILINGQPVRRIIPKRGIRQGDPISP 96
Score = 30.4 bits (67), Expect(3) = 1e-07
Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = -2
Query: 139 AHLKKMKLSRYRI-RNRPSISHLLFVDD*LLFARA 38
A +K +L ++ RN P+ISHLLF D L+F +A
Sbjct: 112 ASIKAKQLHGFKASRNGPAISHLLFAHDSLVFCKA 146
Score = 30.0 bits (66), Expect(3) = 1e-07
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTS 132
PYL++LC EGLS L++ S
Sbjct: 96 PYLYLLCTEGLSALIQAS 113
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 33.9 bits (76), Expect(3) = 2e-07
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
PYLFI+C EGLS+L+R ++ + T+
Sbjct: 1065 PYLFIICAEGLSSLIRQAEGSGTI 1088
Score = 33.5 bits (75), Expect(3) = 2e-07
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
SV +S+++NG +P RG+ Q DPLSP
Sbjct: 1036 SVDYSVILNGEKIGPIIPGRGLRQGDPLSP 1065
Score = 32.0 bits (71), Expect(3) = 2e-07
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -2
Query: 100 RNRPSISHLLFVDD*LLFARADELQAFKLREI 5
+N P ISHLLF DD LF +A QA ++ I
Sbjct: 1095 KNAPIISHLLFADDCFLFFKAKSGQAQGMKNI 1126
>ref|XP_004959141.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Setaria
italica]
Length = 950
Score = 37.0 bits (84), Expect(3) = 2e-07
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
+VT+ + +NG+ T PTRG+ Q DPLSP
Sbjct: 187 TVTYRVKVNGVLTEEIKPTRGLRQGDPLSP 216
Score = 31.2 bits (69), Expect(3) = 2e-07
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQE 126
PYLF+LC EG S++L ++E
Sbjct: 216 PYLFLLCAEGFSSMLNVAEE 235
Score = 31.2 bits (69), Expect(3) = 2e-07
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = -2
Query: 97 NRPSISHLLFVDD*LLFARADELQAFKLREI 5
N PSI+HLLF DD LL +A++ A L+ +
Sbjct: 247 NAPSITHLLFADDALLLLKANQENANYLQYV 277
>gb|EMJ04543.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 35.4 bits (80), Expect(3) = 3e-07
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2
Query: 100 RNRPSISHLLFVDD*LLFARADELQAFKLREIF 2
R PS+SHL F DD LF RAD+ +L IF
Sbjct: 1034 RGAPSVSHLFFADDSFLFLRADQQDCEQLSIIF 1066
Score = 35.0 bits (79), Expect(3) = 3e-07
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
+V++S ++NG P +P RG+ Q DPLSP
Sbjct: 975 TVSYSFMLNGNPVGYVIPQRGLRQGDPLSP 1004
Score = 28.5 bits (62), Expect(3) = 3e-07
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
PYLF+LC E LS+L+ ++ L
Sbjct: 1004 PYLFLLCAEALSSLILQAERRNLL 1027
>gb|AAG13524.1|AC068924_29 putative non-LTR retroelement reverse transcriptase [Oryza sativa
Japonica Group]
Length = 1382
Score = 34.7 bits (78), Expect(3) = 4e-07
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
SV +++ ING T VP+RGI Q DP+SP
Sbjct: 627 SVRYAVKINGELTKPVVPSRGIRQGDPISP 656
Score = 33.9 bits (76), Expect(3) = 4e-07
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 145 CYAHLKKMKLSRYRIRNR---PSISHLLFVDD*LLFARAD--ELQAFK 17
C H K++ I+N P ISHLLF DD + FA+AD +QA K
Sbjct: 668 CLLHKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALK 715
Score = 30.0 bits (66), Expect(3) = 4e-07
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQ 129
PYLF+LC EGLS LL +
Sbjct: 656 PYLFLLCTEGLSCLLHKKE 674
>gb|AAP54617.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group] gi|125575397|gb|EAZ16681.1| hypothetical
protein OsJ_32156 [Oryza sativa Japonica Group]
Length = 1339
Score = 34.7 bits (78), Expect(3) = 4e-07
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
SV +++ ING T VP+RGI Q DP+SP
Sbjct: 584 SVRYAVKINGELTKPVVPSRGIRQGDPISP 613
Score = 33.9 bits (76), Expect(3) = 4e-07
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Frame = -2
Query: 145 CYAHLKKMKLSRYRIRNR---PSISHLLFVDD*LLFARAD--ELQAFK 17
C H K++ I+N P ISHLLF DD + FA+AD +QA K
Sbjct: 625 CLLHKKEVAGELQGIKNGRHGPPISHLLFADDSIFFAKADSRNVQALK 672
Score = 30.0 bits (66), Expect(3) = 4e-07
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQ 129
PYLF+LC EGLS LL +
Sbjct: 613 PYLFLLCTEGLSCLLHKKE 631
>gb|EEE68778.1| hypothetical protein OsJ_27492 [Oryza sativa Japonica Group]
Length = 1170
Score = 39.3 bits (90), Expect(3) = 4e-07
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -2
Query: 100 RNRPSISHLLFVDD*LLFARADELQAFKLREI 5
R P ISHLLF DD LLF +AD QA ++R++
Sbjct: 536 RRAPGISHLLFADDSLLFFKADTEQASRIRDV 567
Score = 33.1 bits (74), Expect(3) = 4e-07
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
SV +++ NG F PTRG+ Q DPLSP
Sbjct: 477 SVQYNVRFNGHLLEPFSPTRGLRQGDPLSP 506
Score = 26.2 bits (56), Expect(3) = 4e-07
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
PYLF+L +GLS +++ S E+E L
Sbjct: 506 PYLFLLVADGLSNIIK-SNESEGL 528
>gb|EEE67582.1| hypothetical protein OsJ_25113 [Oryza sativa Japonica Group]
Length = 915
Score = 35.4 bits (80), Expect(3) = 4e-07
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
SV++ I +NG T F+P RG+ Q DPLSP
Sbjct: 824 SVSYKIRVNGELTEEFLPGRGLHQGDPLSP 853
Score = 32.3 bits (72), Expect(3) = 4e-07
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = -2
Query: 106 RIRNRPSISHLLFVDD*LLFARADELQAFKLREI 5
+ + PS+SHLLF +D L+ RAD A +L+ I
Sbjct: 881 KCQGAPSVSHLLFANDSLILCRADRGDAQQLQSI 914
Score = 30.8 bits (68), Expect(3) = 4e-07
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQE 126
PYLF+LC EG S LL ++E
Sbjct: 853 PYLFLLCAEGFSALLSQAEE 872
>gb|EMJ14194.1| hypothetical protein PRUPE_ppa022768mg, partial [Prunus persica]
Length = 887
Score = 37.4 bits (85), Expect(3) = 4e-07
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
SV++S LINGI T P+RG+ Q DPLSP
Sbjct: 193 SVSYSFLINGILTGYLHPSRGLRQGDPLSP 222
Score = 30.8 bits (68), Expect(3) = 4e-07
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETLK 111
PYLF+ C EGLSTL+ + LK
Sbjct: 222 PYLFLFCAEGLSTLIAKKESAWLLK 246
Score = 30.4 bits (67), Expect(3) = 4e-07
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 100 RNRPSISHLLFVDD*LLFARADELQAFKLREI 5
+ PSISHLLF DD L FA A + +R I
Sbjct: 252 KEAPSISHLLFADDSLFFALATVEECQVIRAI 283
>ref|XP_004289367.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 1152
Score = 35.0 bits (79), Expect(3) = 5e-07
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
+V++S L+NG P +PTRG+ Q D +SP
Sbjct: 370 TVSYSFLVNGEPCGKLIPTRGLRQGDAISP 399
Score = 35.0 bits (79), Expect(3) = 5e-07
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -2
Query: 91 PSISHLLFVDD*LLFARADELQAFKLREIF 2
PSISHL F DD +F+RA+E +++IF
Sbjct: 432 PSISHLYFADDSFIFSRAEERDMLCMKDIF 461
Score = 28.1 bits (61), Expect(3) = 5e-07
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQEN 123
PYLF+LC E LS +++ ++ N
Sbjct: 399 PYLFLLCAEVLSRMIKQAETN 419
>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 653
Score = 36.2 bits (82), Expect(3) = 7e-07
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
PYLFILC EG+STL++ ++ N L
Sbjct: 233 PYLFILCAEGMSTLIKQAERNNIL 256
Score = 33.9 bits (76), Expect(3) = 7e-07
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = -2
Query: 100 RNRPSISHLLFVDD*LLFARADELQAFKLREI 5
+ P++SHLLF DD LF RA+E + L++I
Sbjct: 263 KRAPTVSHLLFADDSFLFFRANENETRALKDI 294
Score = 27.7 bits (60), Expect(3) = 7e-07
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 270 VTFSILINGIPTHTFVPTRGILQEDPLSP 184
V++ +L+N P RG+ Q DPLSP
Sbjct: 205 VSYHVLVNDDRVGPIYPGRGLRQGDPLSP 233
>gb|EOY13397.1| Uncharacterized protein TCM_031959 [Theobroma cacao]
Length = 1217
Score = 45.4 bits (106), Expect(3) = 8e-07
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
+V +S+LING+P +FVP+RG+ Q DPLSP
Sbjct: 586 TVPYSVLINGVPGQSFVPSRGVRQRDPLSP 615
Score = 26.6 bits (57), Expect(3) = 8e-07
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -2
Query: 100 RNRPSISHLLFVDD*LLFARADELQAFKLREIF 2
R +I+HLLF DD ++F + + L+ IF
Sbjct: 645 RRGSNITHLLFADDSMIFGKVKRQEIQVLKGIF 677
Score = 25.4 bits (54), Expect(3) = 8e-07
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
P+LF++ E LS L+ SQE +
Sbjct: 615 PFLFVIMSEALSCLINLSQETNII 638
>gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japonica Group]
Length = 469
Score = 40.0 bits (92), Expect(3) = 9e-07
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -2
Query: 100 RNRPSISHLLFVDD*LLFARADELQAFKLREI 5
R P ISHLLFVDD LLF +AD QA +RE+
Sbjct: 354 RRAPGISHLLFVDDTLLFFKADNGQANVIREV 385
Score = 35.8 bits (81), Expect(3) = 9e-07
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSPLPLHFM 166
S+ +S+ +NG TF P+RG+ Q DPLSP F+
Sbjct: 295 SMRYSVKLNGTLLSTFAPSRGLHQGDPLSPFLFLFV 330
Score = 21.6 bits (44), Expect(3) = 9e-07
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 185 PYLFILCVEGLSTLL 141
P+LF+ +GLS LL
Sbjct: 324 PFLFLFVADGLSLLL 338
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 36.2 bits (82), Expect(3) = 1e-06
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
SVT+S+L+ G P P+RG+ Q DP+SP
Sbjct: 900 SVTYSVLLQGAPFGKIKPSRGLRQGDPISP 929
Score = 32.3 bits (72), Expect(3) = 1e-06
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = -2
Query: 100 RNRPSISHLLFVDD*LLFARADELQAFKLREIF 2
R PS+SHL + DD LLF A L+ IF
Sbjct: 959 RGAPSVSHLFYADDSLLFCDATVTDCMALKNIF 991
Score = 28.5 bits (62), Expect(3) = 1e-06
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
PYLF++ EGLS L+R ++ + +
Sbjct: 929 PYLFLIVAEGLSALIRKAEREQQI 952
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 34.3 bits (77), Expect(3) = 1e-06
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
+VT+ I +NG + +F P RG+ Q DPLSP
Sbjct: 841 TVTYRIRVNGELSESFSPERGLRQGDPLSP 870
Score = 31.6 bits (70), Expect(3) = 1e-06
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -2
Query: 91 PSISHLLFVDD*LLFARADELQAFKLREI 5
PS+SHLLF DD L+ RA+ +A +L+ I
Sbjct: 903 PSVSHLLFADDSLILCRANGGEAQQLQTI 931
Score = 31.2 bits (69), Expect(3) = 1e-06
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
PYLF+LC EG S LL ++E L
Sbjct: 870 PYLFLLCAEGFSALLSKTEEEGRL 893
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 34.3 bits (77), Expect(3) = 1e-06
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
+VT+ I +NG + +F P RG+ Q DPLSP
Sbjct: 813 TVTYRIRVNGELSESFSPERGLRQGDPLSP 842
Score = 31.6 bits (70), Expect(3) = 1e-06
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -2
Query: 91 PSISHLLFVDD*LLFARADELQAFKLREI 5
PS+SHLLF DD L+ RA+ +A +L+ I
Sbjct: 875 PSVSHLLFADDSLILCRANGGEAQQLQTI 903
Score = 31.2 bits (69), Expect(3) = 1e-06
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
PYLF+LC EG S LL ++E L
Sbjct: 842 PYLFLLCAEGFSALLSKTEEEGRL 865
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 34.3 bits (77), Expect(3) = 1e-06
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = -3
Query: 273 SVTFSILINGIPTHTFVPTRGILQEDPLSP 184
+VT+ I +NG + +F P RG+ Q DPLSP
Sbjct: 809 TVTYRIRVNGELSESFSPERGLRQGDPLSP 838
Score = 31.6 bits (70), Expect(3) = 1e-06
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -2
Query: 91 PSISHLLFVDD*LLFARADELQAFKLREI 5
PS+SHLLF DD L+ RA+ +A +L+ I
Sbjct: 871 PSVSHLLFADDSLILCRANGGEAQQLQTI 899
Score = 31.2 bits (69), Expect(3) = 1e-06
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 185 PYLFILCVEGLSTLLRTSQENETL 114
PYLF+LC EG S LL ++E L
Sbjct: 838 PYLFLLCAEGFSALLSKTEEEGRL 861