BLASTX nr result
ID: Catharanthus22_contig00030064
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00030064
(931 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 151 6e-52
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 139 1e-48
gb|AFB73911.1| polyprotein [Citrus sinensis] 138 2e-48
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 137 5e-48
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 141 6e-48
gb|AFB73912.1| polyprotein [Citrus sinensis] 137 8e-48
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 137 1e-47
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 137 1e-47
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 137 2e-47
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 132 2e-47
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 137 3e-47
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-... 139 1e-46
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group] 136 1e-46
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group] 136 1e-46
emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera] 124 2e-46
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi... 123 3e-46
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 129 3e-46
emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera] 124 3e-46
emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera] 124 6e-46
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote... 131 6e-46
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 151 bits (381), Expect(3) = 6e-52
Identities = 78/180 (43%), Positives = 118/180 (65%)
Frame = -2
Query: 930 IMLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXX 751
I+L++VA +LELEQ+ V FLHG+L + I + QP FE K KE++ C
Sbjct: 910 ILLAMVALLDLELEQMDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVCLLHKSLYGLKQ 969
Query: 750 SPI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKL 571
SP Y RFD F+ + G+RRSR+D+C+++ G YLLL+V+D+LIA K K ++ +L
Sbjct: 970 SPRQWYRRFDDFMVSKGYRRSRYDSCVYFGGSDQGGVAYLLLYVDDMLIASKYKSEIERL 1029
Query: 570 KSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCTSM 391
K+ LK+EF++KDLG A RIL M+I+++R +L +SQG +KK++ +F + CK V T +
Sbjct: 1030 KNLLKAEFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKKVLERFEMQDCKPVQTPL 1089
Score = 56.2 bits (134), Expect(3) = 6e-52
Identities = 22/57 (38%), Positives = 39/57 (68%)
Frame = -3
Query: 341 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
+ ++ PY ++ S+MY+M+ TR DIA+ ++++S ++S P K H A+KW + YLK
Sbjct: 1104 ESQMNEFPYAQAVGSLMYAMVCTRSDIAYAVSVVSRYLSCPGKVHWNAVKWIMRYLK 1160
Score = 45.4 bits (106), Expect(3) = 6e-52
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -1
Query: 133 SKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
S E++G++D DFA D D RKST+ Y F + +SWKS LQ
Sbjct: 1174 SDKIEVMGFVDSDFAGDLDRRKSTSRYMFVLNSCLISWKSSLQ 1216
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 139 bits (350), Expect(3) = 1e-48
Identities = 77/175 (44%), Positives = 108/175 (61%)
Frame = -2
Query: 921 SIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXSPI 742
SIV +LELEQL V FLHG+L + IY+ QP F V GKE++ C SP
Sbjct: 905 SIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVCKLKRSLYGLKQSPR 964
Query: 741 *SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLKSH 562
Y RFD+F+ + GF+RS FD+C+ Y +YLLL+V+D+LIA K K+++ LK
Sbjct: 965 QWYKRFDSFMLSHGFKRSEFDSCV-YIKFVNGSPIYLLLYVDDMLIAAKSKEQITTLKKQ 1023
Query: 561 LKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCT 397
L SEFD+KDLG A +IL M I ++R + L +SQ +KK++ +F++ K V T
Sbjct: 1024 LSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKKVLQRFNMHDAKPVST 1078
Score = 52.4 bits (124), Expect(3) = 1e-48
Identities = 19/54 (35%), Positives = 39/54 (72%)
Frame = -3
Query: 332 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
++ +PY ++ S+MY+M+ + PD++ ++L+S +M+NP K+H A++W YL+
Sbjct: 1101 MSRVPYSSAVGSLMYAMVCSWPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLR 1154
Score = 50.4 bits (119), Expect(3) = 1e-48
Identities = 29/56 (51%), Positives = 34/56 (60%)
Frame = -1
Query: 169 GTIDRGLHF*KWSKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQP 2
GT D L F + K L+GY+D DFA D D R+S T Y FTI VSWK+ LQP
Sbjct: 1155 GTADACLKFGRIDKG--LVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQP 1208
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 138 bits (347), Expect(3) = 2e-48
Identities = 76/184 (41%), Positives = 113/184 (61%)
Frame = -2
Query: 930 IMLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXX 751
I+L++ A F+L LEQL V FLHG+L + IY+ QP F GKEN C
Sbjct: 887 IVLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQ 946
Query: 750 SPI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKL 571
+P Y RFD+FI + G+ R D+C +Y + + LLL+V+D+L+A KD++ +L
Sbjct: 947 APRYWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQEL 1006
Query: 570 KSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCTSM 391
K+ L EF++KDLG A++IL M I ++R N + +SQ LKKI+ +F++ CKS+ TS+
Sbjct: 1007 KAQLAREFEMKDLGPANKILGMQIHRDRNNMKIWLSQKNYLKKILRRFNMQDCKSISTSL 1066
Query: 390 *VIF 379
V F
Sbjct: 1067 PVNF 1070
Score = 55.1 bits (131), Expect(3) = 2e-48
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = -3
Query: 341 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
+KE++ +PY ++ S+M++MI TRPDIA + ++S +M+NP +H A+K L Y++
Sbjct: 1084 RKEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIR 1140
Score = 48.1 bits (113), Expect(3) = 2e-48
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -1
Query: 169 GTIDRGLHF*KWSKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
GT D L + F + GY+D DFA D D RKSTT Y FT+ G VSW S+LQ
Sbjct: 1141 GTSDVALCY--GGSEFTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQ 1193
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 137 bits (346), Expect(3) = 5e-48
Identities = 78/176 (44%), Positives = 112/176 (63%)
Frame = -2
Query: 924 LSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXSP 745
LSIVA +LELEQL V FLHG+L + IY+ QP F V GKE + C SP
Sbjct: 917 LSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSP 976
Query: 744 I*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLKS 565
RFD+F+ + F+RS++D+C+ Y +YLLL+V+D+LIA K K ++ KLK
Sbjct: 977 RQWNKRFDSFMLSHSFKRSKYDSCV-YIKHVNGSPIYLLLYVDDMLIAAKSKIEITKLKK 1035
Query: 564 HLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCT 397
L SEFD+KDLG+A +IL M I ++RK+ L +SQ +KK++ +F++ + K+V T
Sbjct: 1036 LLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVST 1091
Score = 59.3 bits (142), Expect(3) = 5e-48
Identities = 22/54 (40%), Positives = 41/54 (75%)
Frame = -3
Query: 332 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
++ +PY ++ S+MY+M+ +RPD+++ ++L+S +MSNP K+H AL+W YL+
Sbjct: 1114 MSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLR 1167
Score = 42.7 bits (99), Expect(3) = 5e-48
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -1
Query: 118 LIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
LIGY+D D+A D D R+S T Y FTI VSW++ LQ
Sbjct: 1183 LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQ 1220
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 141 bits (355), Expect(3) = 6e-48
Identities = 75/178 (42%), Positives = 112/178 (62%)
Frame = -2
Query: 930 IMLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXX 751
++L+IVA NLELEQL V FLHG+L + IY+ QP F+V GKEN C
Sbjct: 887 VLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVCKLKKSLYGLKQ 946
Query: 750 SPI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKL 571
SP Y RFD+++ G+ RS +D C++Y + D +YL+L+V+D+LIA K K + KL
Sbjct: 947 SPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKL 1006
Query: 570 KSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCT 397
K L +EF++KDLG A +IL M I+++R+ L +SQ ++K++ +F + S K + T
Sbjct: 1007 KGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFGMSSSKPIDT 1064
Score = 52.8 bits (125), Expect(3) = 6e-48
Identities = 21/57 (36%), Positives = 39/57 (68%)
Frame = -3
Query: 341 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
K+ ++ +PY ++ S+MY+M+ TRPD+A ++++S FM P ++H A+K YL+
Sbjct: 1084 KEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLR 1140
Score = 45.4 bits (106), Expect(3) = 6e-48
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = -1
Query: 169 GTIDRGLHF*KWSKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQP 2
GT D GL + ++ + GY D D+A D D R+S T Y FT+ G+ VSWK+ LQP
Sbjct: 1141 GTSDVGLIYGGDTQCL-VTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKATLQP 1195
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 137 bits (344), Expect(3) = 8e-48
Identities = 75/184 (40%), Positives = 112/184 (60%)
Frame = -2
Query: 930 IMLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXX 751
I+L++ A F+L LEQL V FLHG+L + IY+ QP F GKEN C
Sbjct: 887 IVLAMCATFDLHLEQLDVKTAFLHGELEEEIYMLQPEGFAETGKENLVCRLNKSLYGLKQ 946
Query: 750 SPI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKL 571
+P Y RFD+FI + G+ R D+C +Y + + LLL+V+D+L+A KD++ +L
Sbjct: 947 APRCWYKRFDSFIMSLGYNRLSSDHCAYYKRFEDNDFIILLLYVDDMLVAGPNKDRIQEL 1006
Query: 570 KSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCTSM 391
K+ L EF++KDLG A++IL M I ++R N + +SQ LKKI+ +F++ CKS+ T +
Sbjct: 1007 KAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKKILRRFNMQDCKSISTPL 1066
Query: 390 *VIF 379
V F
Sbjct: 1067 PVNF 1070
Score = 54.3 bits (129), Expect(3) = 8e-48
Identities = 23/57 (40%), Positives = 40/57 (70%)
Frame = -3
Query: 341 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
+KE++ +PY ++ S+M++MI TRPDIA + +S +M+NP +H A+K L Y++
Sbjct: 1084 RKEMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYIR 1140
Score = 47.8 bits (112), Expect(3) = 8e-48
Identities = 24/40 (60%), Positives = 28/40 (70%)
Frame = -1
Query: 124 FELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
F + GY+D DFA D D RKSTT Y FT+ G VSW S+LQ
Sbjct: 1154 FTVRGYVDSDFAGDLDKRKSTTGYVFTLAGAAVSWVSKLQ 1193
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 137 bits (346), Expect(3) = 1e-47
Identities = 78/176 (44%), Positives = 112/176 (63%)
Frame = -2
Query: 924 LSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXSP 745
LSIVA +LELEQL V FLHG+L + IY+ QP F V GKE + C SP
Sbjct: 915 LSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSP 974
Query: 744 I*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLKS 565
RFD+F+ + F+RS++D+C+ Y +YLLL+V+D+LIA K K ++ KLK
Sbjct: 975 RQWNKRFDSFMLSHSFKRSKYDSCV-YIKHVNGSPIYLLLYVDDMLIAAKSKIEITKLKK 1033
Query: 564 HLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCT 397
L SEFD+KDLG+A +IL M I ++RK+ L +SQ +KK++ +F++ + K+V T
Sbjct: 1034 LLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVST 1089
Score = 58.2 bits (139), Expect(3) = 1e-47
Identities = 21/54 (38%), Positives = 41/54 (75%)
Frame = -3
Query: 332 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
++ +PY ++ S+MY+M+ +RPD+++ ++L+S +MSNP K+H A++W YL+
Sbjct: 1112 MSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLR 1165
Score = 42.7 bits (99), Expect(3) = 1e-47
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -1
Query: 118 LIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
LIGY+D D+A D D R+S T Y FTI VSW++ LQ
Sbjct: 1181 LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQ 1218
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 137 bits (346), Expect(3) = 1e-47
Identities = 78/176 (44%), Positives = 112/176 (63%)
Frame = -2
Query: 924 LSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXSP 745
LSIVA +LELEQL V FLHG+L + IY+ QP F V GKE + C SP
Sbjct: 915 LSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSP 974
Query: 744 I*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLKS 565
RFD+F+ + F+RS++D+C+ Y +YLLL+V+D+LIA K K ++ KLK
Sbjct: 975 RQWNKRFDSFMLSHSFKRSKYDSCV-YIKHVNGSPIYLLLYVDDMLIAAKSKIEITKLKK 1033
Query: 564 HLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCT 397
L SEFD+KDLG+A +IL M I ++RK+ L +SQ +KK++ +F++ + K+V T
Sbjct: 1034 LLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVST 1089
Score = 58.2 bits (139), Expect(3) = 1e-47
Identities = 21/54 (38%), Positives = 41/54 (75%)
Frame = -3
Query: 332 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
++ +PY ++ S+MY+M+ +RPD+++ ++L+S +MSNP K+H A++W YL+
Sbjct: 1112 MSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLR 1165
Score = 42.7 bits (99), Expect(3) = 1e-47
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -1
Query: 118 LIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
LIGY+D D+A D D R+S T Y FTI VSW++ LQ
Sbjct: 1181 LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQ 1218
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 137 bits (344), Expect(3) = 2e-47
Identities = 76/177 (42%), Positives = 110/177 (62%)
Frame = -2
Query: 927 MLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXS 748
+LSIVA + ELEQ+ V FLHG+L + IY++QP F V GKEN C S
Sbjct: 822 LLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQS 881
Query: 747 PI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLK 568
P Y RFD+F+ + FRRS +D+C+ Y ++YLLL+V+D+LIA K K ++ KLK
Sbjct: 882 PRQWYKRFDSFMLSQKFRRSNYDSCV-YLKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLK 940
Query: 567 SHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCT 397
+ L SEF++KDLG A +IL M I + R + L +SQ ++K++ +F++ K V T
Sbjct: 941 AQLSSEFEMKDLGAAKKILGMEITRERHSGKLYLSQKCYIEKVLHRFNMHDAKLVST 997
Score = 55.1 bits (131), Expect(3) = 2e-47
Identities = 19/54 (35%), Positives = 40/54 (74%)
Frame = -3
Query: 332 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
++ +PY ++ S+MY+M+ +RPD++ ++++S +M+NP K+H A++W YL+
Sbjct: 1020 MSRVPYSSAVSSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLR 1073
Score = 45.8 bits (107), Expect(3) = 2e-47
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = -1
Query: 118 LIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
L+GY+D DFA D D R+S T Y FT+ G VSWK+ LQ
Sbjct: 1089 LVGYVDSDFAGDLDRRRSLTGYVFTVGGCAVSWKASLQ 1126
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 132 bits (331), Expect(3) = 2e-47
Identities = 74/173 (42%), Positives = 105/173 (60%)
Frame = -2
Query: 921 SIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXSPI 742
SIVA +LELEQL V FLHG+L + IY+ QP F V GKE + C SP
Sbjct: 589 SIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEGYVCKLKRSFYGLKQSPR 648
Query: 741 *SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLKSH 562
Y RFD F+ + GF+RS FD+C++ ++ S LL+V+D+LIA K K+++ LK
Sbjct: 649 QWYKRFDLFMLSHGFKRSEFDSCVYI--KFVNGSPIYLLYVDDMLIAAKSKEQITTLKKQ 706
Query: 561 LKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSV 403
L SEFD+KDLG A +IL M I ++R + L +SQ +K ++ +F++ K V
Sbjct: 707 LSSEFDMKDLGAAKKILGMEITRDRNSGLLFLSQQSYIKNVLQRFNMHDAKLV 759
Score = 55.5 bits (132), Expect(3) = 2e-47
Identities = 20/54 (37%), Positives = 40/54 (74%)
Frame = -3
Query: 332 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
++ +PY ++ S+MY+M+ +RPD++ ++L+S +M+NP K+H A++W YL+
Sbjct: 784 MSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPGKEHWKAVQWIFRYLR 837
Score = 50.4 bits (119), Expect(3) = 2e-47
Identities = 28/56 (50%), Positives = 34/56 (60%)
Frame = -1
Query: 169 GTIDRGLHF*KWSKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQP 2
GT D L F + K L+GY+D DFA D D R+S T Y FTI +SWK+ LQP
Sbjct: 838 GTADACLKFGRTDKG--LVGYVDSDFAADLDKRRSLTGYVFTISSCAMSWKATLQP 891
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 137 bits (346), Expect(3) = 3e-47
Identities = 78/176 (44%), Positives = 112/176 (63%)
Frame = -2
Query: 924 LSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXSP 745
LSIVA +LELEQL V FLHG+L + IY+ QP F V GKE + C SP
Sbjct: 915 LSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVCKLKRSLYGLKQSP 974
Query: 744 I*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLKS 565
RFD+F+ + F+RS++D+C+ Y +YLLL+V+D+LIA K K ++ KLK
Sbjct: 975 RQWNKRFDSFMLSHSFKRSKYDSCV-YIKHVNGSPIYLLLYVDDMLIAAKSKIEITKLKK 1033
Query: 564 HLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCT 397
L SEFD+KDLG+A +IL M I ++RK+ L +SQ +KK++ +F++ + K+V T
Sbjct: 1034 LLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKKVLQRFNMQNAKAVST 1089
Score = 56.6 bits (135), Expect(3) = 3e-47
Identities = 20/54 (37%), Positives = 40/54 (74%)
Frame = -3
Query: 332 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
++ +PY ++ S+MY+M+ +RPD+++ ++L+S +MSNP K+H ++W YL+
Sbjct: 1112 MSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLR 1165
Score = 42.7 bits (99), Expect(3) = 3e-47
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -1
Query: 118 LIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
LIGY+D D+A D D R+S T Y FTI VSW++ LQ
Sbjct: 1181 LIGYVDSDYAADLDRRRSLTGYVFTIGSCAVSWRATLQ 1218
>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77548751|gb|ABA91548.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 2340
Score = 139 bits (349), Expect(3) = 1e-46
Identities = 76/179 (42%), Positives = 111/179 (62%)
Frame = -2
Query: 927 MLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXS 748
+LSIVA + ELEQ+ V FLHG+L + IY++QP F V GKEN C S
Sbjct: 1120 LLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPKGFVVPGKENLVCRLKKSLYGLKQS 1179
Query: 747 PI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLK 568
P Y RFD+F+ + FRRS +D+C+ Y ++YLLL+V+D+LIA K K ++ KLK
Sbjct: 1180 PRQWYKRFDSFMLSQKFRRSNYDSCV-YLKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLK 1238
Query: 567 SHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCTSM 391
+ L SEF++KDLG A +IL M I + R + L +SQ ++K++ +F++ K V T +
Sbjct: 1239 AQLSSEFEMKDLGAAKKILGMEITRKRHSFKLYLSQKGYIEKVLRRFNMHDAKPVSTPL 1297
Score = 54.7 bits (130), Expect(3) = 1e-46
Identities = 19/54 (35%), Positives = 40/54 (74%)
Frame = -3
Query: 332 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
++ +PY ++ S+MY+M+ +RPD++ ++++S +M+NP K+H A++W YL+
Sbjct: 1318 MSRVPYSSAVGSLMYAMVCSRPDLSHALSVVSRYMANPGKEHWKAVQWIFRYLR 1371
Score = 41.6 bits (96), Expect(3) = 1e-46
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = -1
Query: 118 LIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
L+GY+D DFA D D +S Y FTI G VSWK+ LQ
Sbjct: 1387 LVGYVDSDFAGDLDRGRSLAGYVFTIGGCAVSWKASLQ 1424
>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
Length = 1205
Score = 136 bits (343), Expect(3) = 1e-46
Identities = 74/175 (42%), Positives = 109/175 (62%)
Frame = -2
Query: 927 MLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXS 748
+LSIVA + ELEQ+ V FLHG+L + IY++QP F V GKEN C S
Sbjct: 839 LLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQS 898
Query: 747 PI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLK 568
P Y RFD+F+ + FRRS +D+C+ Y ++YLLL+V+D+LIA K K ++ KLK
Sbjct: 899 PRQWYKRFDSFMLSQKFRRSNYDSCV-YLKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLK 957
Query: 567 SHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSV 403
+ L SEF++KDLG A +IL M I + R + L +SQ ++K++ +F++ K +
Sbjct: 958 AQLSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAKPI 1012
Score = 52.4 bits (124), Expect(3) = 1e-46
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = -3
Query: 323 LPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYL 174
+PY ++ S+MY+MI +RPD++ ++++S +M NP K+H A++W YL
Sbjct: 1020 VPYSSAVGSLMYAMICSRPDLSHALSVVSRYMVNPGKEHWKAVQWIFRYL 1069
Score = 46.2 bits (108), Expect(3) = 1e-46
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -1
Query: 118 LIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
L+GY+D DFA D D R+S T Y FTI G VSWK+ LQ
Sbjct: 1086 LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQ 1123
>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
Length = 1037
Score = 136 bits (343), Expect(3) = 1e-46
Identities = 74/175 (42%), Positives = 109/175 (62%)
Frame = -2
Query: 927 MLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXS 748
+LSIVA + ELEQ+ V FLHG+L + IY++QP F V GKEN C S
Sbjct: 671 LLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQPEGFVVPGKENLVCRLKKSLYGLKQS 730
Query: 747 PI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLK 568
P Y RFD+F+ + FRRS +D+C+ Y ++YLLL+V+D+LIA K K ++ KLK
Sbjct: 731 PRQWYKRFDSFMLSQKFRRSNYDSCV-YLKVVDGSAIYLLLYVDDMLIAAKDKSEIAKLK 789
Query: 567 SHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSV 403
+ L SEF++KDLG A +IL M I + R + L +SQ ++K++ +F++ K +
Sbjct: 790 AQLSSEFEMKDLGAAKKILGMEITRERHSDKLYLSQKGYIEKVLRRFNMHDAKPI 844
Score = 52.4 bits (124), Expect(3) = 1e-46
Identities = 20/50 (40%), Positives = 36/50 (72%)
Frame = -3
Query: 323 LPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYL 174
+PY ++ S+MY+MI +RPD++ ++++S +M NP K+H A++W YL
Sbjct: 852 VPYSSAVGSLMYAMICSRPDLSHALSVVSRYMVNPGKEHWKAVQWIFRYL 901
Score = 46.2 bits (108), Expect(3) = 1e-46
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -1
Query: 118 LIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
L+GY+D DFA D D R+S T Y FTI G VSWK+ LQ
Sbjct: 918 LVGYVDSDFAGDLDRRRSLTGYVFTIGGCAVSWKASLQ 955
>emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]
Length = 1264
Score = 124 bits (311), Expect(3) = 2e-46
Identities = 70/181 (38%), Positives = 107/181 (59%), Gaps = 1/181 (0%)
Frame = -2
Query: 930 IMLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXX 751
++L +VA NL LEQL V FLHGDL + +Y+ QP F V+G+EN C
Sbjct: 844 LVLGMVAVENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQ 903
Query: 750 SPI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKS-VYLLLWVNDILIACK*KDKLIK 574
+P Y +FD F+ GF+R D+C + S D S + LLL+V+D+LIA +K+
Sbjct: 904 APRQWYKKFDNFMHRIGFKRCEADHCCYV--KSFDNSYIILLLYVDDMLIAGSDIEKINN 961
Query: 573 LKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCTS 394
LK L +F +KDLG A +IL M I++++ N +L +SQ +KK++ +F+++ K V T
Sbjct: 962 LKKQLSKQFAMKDLGAAKQILGMRIIRBKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTP 1021
Query: 393 M 391
+
Sbjct: 1022 L 1022
Score = 62.4 bits (150), Expect(3) = 2e-46
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = -3
Query: 341 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
+ ++ +PY +I S+MY+M+ TRPDIA + ++S FMS P K H A+KW L YLK
Sbjct: 1040 RDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHXEAVKWILRYLK 1096
Score = 48.1 bits (113), Expect(3) = 2e-46
Identities = 27/55 (49%), Positives = 34/55 (61%)
Frame = -1
Query: 169 GTIDRGLHF*KWSKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
G++D L F S +L GY+D DFA D D RKSTT + FT+ G +SW S LQ
Sbjct: 1097 GSLDTCLCF--TGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTXISWXSNLQ 1149
>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1335
Score = 123 bits (309), Expect(3) = 3e-46
Identities = 69/183 (37%), Positives = 108/183 (59%)
Frame = -2
Query: 927 MLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXS 748
+LS+V +N+EL+Q+ V FLHG L + IY+ QP FE+K N C S
Sbjct: 913 LLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQS 972
Query: 747 PI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLK 568
P +RFD F++ + RS +D+C+++ + D +YLLL+V+D+LIA K ++ +LK
Sbjct: 973 PRQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELK 1032
Query: 567 SHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCTSM* 388
L EF++KDLG A +IL M I ++R L +SQ +KK++ F +D+ K V T +
Sbjct: 1033 QLLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLG 1092
Query: 387 VIF 379
+ F
Sbjct: 1093 IHF 1095
Score = 64.3 bits (155), Expect(3) = 3e-46
Identities = 27/51 (52%), Positives = 38/51 (74%)
Frame = -3
Query: 323 LPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
+PY +I S+MYSMI TRPD+A+ + ++S FMS P KDH A+KW L Y++
Sbjct: 1115 VPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQAVKWVLRYMR 1165
Score = 46.2 bits (108), Expect(3) = 3e-46
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = -1
Query: 169 GTIDRGLHF*KWSKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
GT + L F K + F L GY D D+ + D R+S T Y FT+ GN +SWKS+LQ
Sbjct: 1166 GTEKKKLCFRK-QEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWKSKLQ 1219
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 129 bits (323), Expect(3) = 3e-46
Identities = 70/184 (38%), Positives = 111/184 (60%)
Frame = -2
Query: 930 IMLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXX 751
++L++ A +L LEQL V FLHG+L + IY+ QP F+ +GKEN C
Sbjct: 883 VVLAMCAALDLHLEQLDVKTAFLHGELEEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQ 942
Query: 750 SPI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKL 571
+P Y RFD+FI + + R D+C +Y + + LLL+V+DIL+ KD++ +L
Sbjct: 943 APRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDILVVGPNKDRVQEL 1002
Query: 570 KSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCTSM 391
K+ L EFD+KDLG A++IL M I ++RK+ + +SQ L+K++ +F++ CK + T +
Sbjct: 1003 KAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPL 1062
Query: 390 *VIF 379
V F
Sbjct: 1063 PVNF 1066
Score = 57.0 bits (136), Expect(3) = 3e-46
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = -3
Query: 341 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
+ E++ +PY ++ S+MY+MI TRPDIA + ++S FM++P K+H A+K + Y+K
Sbjct: 1080 RMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIK 1136
Score = 47.8 bits (112), Expect(3) = 3e-46
Identities = 23/36 (63%), Positives = 26/36 (72%)
Frame = -1
Query: 112 GYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
GY+D DFA D D RKSTT Y FT+ G VSW S+LQ
Sbjct: 1154 GYVDSDFAGDHDKRKSTTGYVFTLTGGAVSWLSKLQ 1189
>emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]
Length = 1186
Score = 124 bits (312), Expect(3) = 3e-46
Identities = 69/180 (38%), Positives = 106/180 (58%)
Frame = -2
Query: 930 IMLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXX 751
++L +VA NL LEQL V FLHGDL + +Y+ QP F V+G+EN C
Sbjct: 558 LVLGMVAAKNLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQ 617
Query: 750 SPI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKL 571
+P Y +FD F+ GF+R D+C YF + + LLL+V+D+LIA +K+ L
Sbjct: 618 APRQWYKKFDNFMHRIGFKRCEADHCC-YFKSFDNSYIILLLYVDDMLIAGSDIEKINNL 676
Query: 570 KSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCTSM 391
K L +F +KDLG A +IL M I++++ N +L +SQ +KK++ +F+++ K V T +
Sbjct: 677 KKQLSKQFAMKDLGAAKQILGMRIIRDKANSTLKLSQSEYVKKVLSRFNMNEAKPVSTPL 736
Score = 62.4 bits (150), Expect(3) = 3e-46
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = -3
Query: 341 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
+ ++ +PY +I S+MY+M+ TRPDIA + ++S FMS P K H A+KW L YLK
Sbjct: 754 RDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLK 810
Score = 46.6 bits (109), Expect(3) = 3e-46
Identities = 27/55 (49%), Positives = 34/55 (61%)
Frame = -1
Query: 169 GTIDRGLHF*KWSKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
G++D L F S +L GY+D DFA D D RKSTT + FT+ G +SW S LQ
Sbjct: 811 GSLDTCLCF--TGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGIAISWTSNLQ 863
>emb|CAN71029.1| hypothetical protein VITISV_001707 [Vitis vinifera]
Length = 1286
Score = 124 bits (311), Expect(3) = 6e-46
Identities = 69/180 (38%), Positives = 106/180 (58%)
Frame = -2
Query: 930 IMLSIVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXX 751
++L +VA NL LEQL V FLHGDL + +Y+ QP F V+G+EN C
Sbjct: 866 LVLGMVAAENLHLEQLDVKTAFLHGDLEEDLYMIQPEGFIVQGQENLVCKLRKSLYGLKQ 925
Query: 750 SPI*SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKL 571
+P Y +FD F+ GF+R D+C YF + + LLL+V+D+LIA +K+ L
Sbjct: 926 APRQWYKKFDNFMHRIGFKRCEADHCC-YFKSFDNSYIILLLYVDDMLIAGSDIEKINNL 984
Query: 570 KSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCTSM 391
K L +F +KDLG A +IL M I++++ N +L +SQ +KK++ +F+++ K V T +
Sbjct: 985 KKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPL 1044
Score = 60.8 bits (146), Expect(3) = 6e-46
Identities = 26/57 (45%), Positives = 38/57 (66%)
Frame = -3
Query: 341 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
+ ++ +PY +I S+MY+M+ TRPDIA + ++S FMS P K H +KW L YLK
Sbjct: 1062 RDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEVVKWILRYLK 1118
Score = 47.8 bits (112), Expect(3) = 6e-46
Identities = 27/55 (49%), Positives = 34/55 (61%)
Frame = -1
Query: 169 GTIDRGLHF*KWSKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQ 5
G++D L F S +L GY+D DFA D D RKSTT + FT+ G +SW S LQ
Sbjct: 1119 GSLDTCLCF--TGASLKLQGYVDADFAGDIDSRKSTTGFVFTLGGTAISWASNLQ 1171
>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
Group] gi|22655747|gb|AAN04164.1| Putative
retrotransposon protein [Oryza sativa Japonica Group]
gi|31431214|gb|AAP53029.1| retrotransposon protein,
putative, Ty1-copia subclass, expressed [Oryza sativa
Japonica Group]
Length = 1229
Score = 131 bits (329), Expect(3) = 6e-46
Identities = 74/174 (42%), Positives = 106/174 (60%)
Frame = -2
Query: 918 IVAFFNLELEQLAVNIVFLHGDLHKAIYIKQPPDFEVKGKENFFCXXXXXXXXXXXSPI* 739
IVA +LELEQL V +FLHG+L + IY+ QP F V GKE+ C SP
Sbjct: 852 IVAMHDLELEQLDVKTIFLHGELEEEIYMDQPEGFIVPGKEDDVCKLKRSLYGLKQSPRQ 911
Query: 738 SYIRFDTFIQNSGFRRSRFDNCLHYFGDSIDKSVYLLLWVNDILIACK*KDKLIKLKSHL 559
Y RFD+F+ + GF+RS FD+C+ Y +YLLL+V+D+LIA K K+++ LK L
Sbjct: 912 WYKRFDSFMLSHGFKRSEFDSCV-YIKFVNGSHIYLLLYVDDMLIAAKSKEQITTLKKQL 970
Query: 558 KSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKKIVLKFSVDSCKSVCT 397
SEFD+KDL + +IL M I ++ + L +SQ +KK++ +F++ K V T
Sbjct: 971 SSEFDMKDLVASKKILGMEITRDINSGLLFLSQQSYIKKVLQRFNIHDAKPVST 1024
Score = 50.8 bits (120), Expect(3) = 6e-46
Identities = 19/54 (35%), Positives = 38/54 (70%)
Frame = -3
Query: 332 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 171
++ +PY + S+MY+M+ +RP ++ ++L+S +M+NP K+H A++W YL+
Sbjct: 1047 MSRVPYSSVVGSLMYAMVCSRPVLSHAMSLVSRYMANPGKEHWKAVQWIFRYLR 1100
Score = 50.8 bits (120), Expect(3) = 6e-46
Identities = 29/56 (51%), Positives = 34/56 (60%)
Frame = -1
Query: 169 GTIDRGLHF*KWSKSFELIGYLDLDFACDKDFRKSTTLYFFTIIGNYVSWKSQLQP 2
GT D L F + K L+GY+D DFA D D R+S T Y FTI VSWK+ LQP
Sbjct: 1101 GTADACLKFGRTDKG--LVGYVDSDFAADLDKRRSLTGYVFTIGSCAVSWKATLQP 1154