BLASTX nr result

ID: Catharanthus22_contig00030006 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00030006
         (364 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]               60   3e-08
ref|XP_002263548.1| PREDICTED: uncharacterized protein LOC100251...    50   3e-07
emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera]    53   4e-07
emb|CAN75159.1| hypothetical protein VITISV_036847 [Vitis vinifera]    50   7e-07
gb|ABQ59165.1| putative gag protein [(Populus tomentosa x P. bol...    56   6e-06

>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score = 59.7 bits (143), Expect(2) = 3e-08
 Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%)
 Frame = -3

Query: 353 WTELKMLMKQRFVREHYYRDLHYKFDDS*ARN---EECRQELELYHLRLCTEEDNDAFIP 183
           WT++K +M++RFV  HYYR+LH +  +    N   EE  +E+E   LR   +EDN+A + 
Sbjct: 508 WTQMKTIMRKRFVPSHYYRELHNRLRNLVQGNKSVEEYYKEMETLMLRADIQEDNEAIMS 567

Query: 182 RFLSGLGKILIN 147
           RF+ GL + +I+
Sbjct: 568 RFMGGLNRDIID 579



 Score = 23.5 bits (49), Expect(2) = 3e-08
 Identities = 15/55 (27%), Positives = 26/55 (47%)
 Frame = -2

Query: 165 RENPNQLETYPFSTYEEMCHLVVKIDNQRKRRGFSKATLPPSRSVVLKHQGSTFK 1
           R+  ++LE   +   EE+ H  +  + Q KRR  SK +    +    K + S F+
Sbjct: 575 RDIIDRLEVQHYVELEELLHKAIMFEKQLKRRS-SKPSFGSGKPSYHKDERSGFQ 628


>ref|XP_002263548.1| PREDICTED: uncharacterized protein LOC100251357 [Vitis vinifera]
          Length = 328

 Score = 49.7 bits (117), Expect(2) = 3e-07
 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -3

Query: 353 WTELKMLMKQRFVREHYYRDLHYKFD---DS*ARNEECRQELELYHLRLCTEEDNDAFIP 183
           W ++K  M++RFV  HYYRDL+ K           ++  +++++  +R   EED +A + 
Sbjct: 156 WEKMKATMRKRFVLSHYYRDLYKKLQSLTQGYRSVDDYHKKMDIAMIRANVEEDREATMA 215

Query: 182 RFLSGLGKILINL 144
           RFL+GL + + N+
Sbjct: 216 RFLNGLNQDIANV 228



 Score = 30.0 bits (66), Expect(2) = 3e-07
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%)
 Frame = -2

Query: 153 NQLETYPFSTYEEMCHLVVKIDNQRKRRGFSKATLPPS----RSVVLKHQGSTFK 1
           N +E   +   E+M H+V+K++ Q KR+G      P S    R    K++G  FK
Sbjct: 227 NVVELQHYVELEDMVHMVIKMERQLKRKGTRSFQNPGSSASWRPNGRKNEGVVFK 281


>emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera]
          Length = 776

 Score = 52.8 bits (125), Expect(2) = 4e-07
 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
 Frame = -3

Query: 353 WTELKMLMKQRFVREHYYRDLHYKFD---DS*ARNEECRQELELYHLRLCTEEDNDAFIP 183
           W E+K  M++RFV  HYYRDL+ K           ++  +E+E+  +R   EE+ +A + 
Sbjct: 264 WEEMKATMRRRFVPSHYYRDLYQKLQSLTQGYRSVDDYHKEMEIAMIRANVEENREATMA 323

Query: 182 RFLSGLGKILINL 144
           RFL+GL + + N+
Sbjct: 324 RFLNGLNRDIANV 336



 Score = 26.6 bits (57), Expect(2) = 4e-07
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -2

Query: 165 RENPNQLETYPFSTYEEMCHLVVKIDNQRKRR 70
           R+  N +E   +   E+M H+ +K++ Q KR+
Sbjct: 331 RDIANVVELQHYVELEDMVHMAIKVERQLKRK 362


>emb|CAN75159.1| hypothetical protein VITISV_036847 [Vitis vinifera]
          Length = 652

 Score = 49.7 bits (117), Expect(2) = 7e-07
 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
 Frame = -3

Query: 353 WTELKMLMKQRFVREHYYRDLHYKFD---DS*ARNEECRQELELYHLRLCTEEDNDAFIP 183
           W E+K  M++RFV  HYY DL+ K           ++  +E+E+  +    EED +A + 
Sbjct: 205 WEEMKATMRRRFVPSHYYSDLYQKLQSLTQGYRSVDDYHKEMEIAMIPTNVEEDREATMA 264

Query: 182 RFLSGLGKILINL 144
           RFL+GL + + N+
Sbjct: 265 RFLNGLNRDIANV 277



 Score = 28.9 bits (63), Expect(2) = 7e-07
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = -2

Query: 165 RENPNQLETYPFSTYEEMCHLVVKIDNQRKRRG 67
           R+  N +E   +   E+M H+ +K++ Q KR+G
Sbjct: 272 RDIANVVELQHYVELEDMVHMAIKVERQLKRKG 304


>gb|ABQ59165.1| putative gag protein [(Populus tomentosa x P. bolleana) x P.
           tomentosa]
          Length = 180

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = -3

Query: 353 WTELKMLMKQRFVREHYYRDLHYK---FDDS*ARNEECRQELELYHLRLCTEEDNDAFIP 183
           W E+K+LM++RFV  HYYRDL+ K    +      +E  +E+E+  +R    ED +A + 
Sbjct: 79  WGEMKVLMRRRFVPNHYYRDLYLKLQGLNQGYKTVDEYHKEMEIAMIRANVVEDREATMA 138

Query: 182 RFLSGLGKILINL 144
           RFL+GL + + N+
Sbjct: 139 RFLNGLNRDIANV 151


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