BLASTX nr result
ID: Catharanthus22_contig00030006
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus22_contig00030006 (364 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 60 3e-08 ref|XP_002263548.1| PREDICTED: uncharacterized protein LOC100251... 50 3e-07 emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera] 53 4e-07 emb|CAN75159.1| hypothetical protein VITISV_036847 [Vitis vinifera] 50 7e-07 gb|ABQ59165.1| putative gag protein [(Populus tomentosa x P. bol... 56 6e-06 >gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] Length = 1887 Score = 59.7 bits (143), Expect(2) = 3e-08 Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 3/72 (4%) Frame = -3 Query: 353 WTELKMLMKQRFVREHYYRDLHYKFDDS*ARN---EECRQELELYHLRLCTEEDNDAFIP 183 WT++K +M++RFV HYYR+LH + + N EE +E+E LR +EDN+A + Sbjct: 508 WTQMKTIMRKRFVPSHYYRELHNRLRNLVQGNKSVEEYYKEMETLMLRADIQEDNEAIMS 567 Query: 182 RFLSGLGKILIN 147 RF+ GL + +I+ Sbjct: 568 RFMGGLNRDIID 579 Score = 23.5 bits (49), Expect(2) = 3e-08 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = -2 Query: 165 RENPNQLETYPFSTYEEMCHLVVKIDNQRKRRGFSKATLPPSRSVVLKHQGSTFK 1 R+ ++LE + EE+ H + + Q KRR SK + + K + S F+ Sbjct: 575 RDIIDRLEVQHYVELEELLHKAIMFEKQLKRRS-SKPSFGSGKPSYHKDERSGFQ 628 >ref|XP_002263548.1| PREDICTED: uncharacterized protein LOC100251357 [Vitis vinifera] Length = 328 Score = 49.7 bits (117), Expect(2) = 3e-07 Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Frame = -3 Query: 353 WTELKMLMKQRFVREHYYRDLHYKFD---DS*ARNEECRQELELYHLRLCTEEDNDAFIP 183 W ++K M++RFV HYYRDL+ K ++ +++++ +R EED +A + Sbjct: 156 WEKMKATMRKRFVLSHYYRDLYKKLQSLTQGYRSVDDYHKKMDIAMIRANVEEDREATMA 215 Query: 182 RFLSGLGKILINL 144 RFL+GL + + N+ Sbjct: 216 RFLNGLNQDIANV 228 Score = 30.0 bits (66), Expect(2) = 3e-07 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 4/55 (7%) Frame = -2 Query: 153 NQLETYPFSTYEEMCHLVVKIDNQRKRRGFSKATLPPS----RSVVLKHQGSTFK 1 N +E + E+M H+V+K++ Q KR+G P S R K++G FK Sbjct: 227 NVVELQHYVELEDMVHMVIKMERQLKRKGTRSFQNPGSSASWRPNGRKNEGVVFK 281 >emb|CAN73562.1| hypothetical protein VITISV_016481 [Vitis vinifera] Length = 776 Score = 52.8 bits (125), Expect(2) = 4e-07 Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%) Frame = -3 Query: 353 WTELKMLMKQRFVREHYYRDLHYKFD---DS*ARNEECRQELELYHLRLCTEEDNDAFIP 183 W E+K M++RFV HYYRDL+ K ++ +E+E+ +R EE+ +A + Sbjct: 264 WEEMKATMRRRFVPSHYYRDLYQKLQSLTQGYRSVDDYHKEMEIAMIRANVEENREATMA 323 Query: 182 RFLSGLGKILINL 144 RFL+GL + + N+ Sbjct: 324 RFLNGLNRDIANV 336 Score = 26.6 bits (57), Expect(2) = 4e-07 Identities = 10/32 (31%), Positives = 19/32 (59%) Frame = -2 Query: 165 RENPNQLETYPFSTYEEMCHLVVKIDNQRKRR 70 R+ N +E + E+M H+ +K++ Q KR+ Sbjct: 331 RDIANVVELQHYVELEDMVHMAIKVERQLKRK 362 >emb|CAN75159.1| hypothetical protein VITISV_036847 [Vitis vinifera] Length = 652 Score = 49.7 bits (117), Expect(2) = 7e-07 Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 3/73 (4%) Frame = -3 Query: 353 WTELKMLMKQRFVREHYYRDLHYKFD---DS*ARNEECRQELELYHLRLCTEEDNDAFIP 183 W E+K M++RFV HYY DL+ K ++ +E+E+ + EED +A + Sbjct: 205 WEEMKATMRRRFVPSHYYSDLYQKLQSLTQGYRSVDDYHKEMEIAMIPTNVEEDREATMA 264 Query: 182 RFLSGLGKILINL 144 RFL+GL + + N+ Sbjct: 265 RFLNGLNRDIANV 277 Score = 28.9 bits (63), Expect(2) = 7e-07 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = -2 Query: 165 RENPNQLETYPFSTYEEMCHLVVKIDNQRKRRG 67 R+ N +E + E+M H+ +K++ Q KR+G Sbjct: 272 RDIANVVELQHYVELEDMVHMAIKVERQLKRKG 304 >gb|ABQ59165.1| putative gag protein [(Populus tomentosa x P. bolleana) x P. tomentosa] Length = 180 Score = 55.8 bits (133), Expect = 6e-06 Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 3/73 (4%) Frame = -3 Query: 353 WTELKMLMKQRFVREHYYRDLHYK---FDDS*ARNEECRQELELYHLRLCTEEDNDAFIP 183 W E+K+LM++RFV HYYRDL+ K + +E +E+E+ +R ED +A + Sbjct: 79 WGEMKVLMRRRFVPNHYYRDLYLKLQGLNQGYKTVDEYHKEMEIAMIRANVVEDREATMA 138 Query: 182 RFLSGLGKILINL 144 RFL+GL + + N+ Sbjct: 139 RFLNGLNRDIANV 151