BLASTX nr result

ID: Catharanthus22_contig00029740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00029740
         (233 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527588.1| hypothetical protein RCOM_1568080 [Ricinus c...    60   4e-07
ref|XP_006826164.1| hypothetical protein AMTR_s05090p00005430, p...    58   2e-06
emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]    57   2e-06
gb|ABQ59165.1| putative gag protein [(Populus tomentosa x P. bol...    57   3e-06

>ref|XP_002527588.1| hypothetical protein RCOM_1568080 [Ricinus communis]
           gi|223533034|gb|EEF34796.1| hypothetical protein
           RCOM_1568080 [Ricinus communis]
          Length = 136

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/74 (37%), Positives = 41/74 (55%)
 Frame = +2

Query: 11  LKLPLLCGTLGPYDYEAWKQKVESLFYSYGVREEEKFQLVLKSLSYEVNVWWDCKCENRR 190
           +K+P   G   P  Y  W++KVE +F  +   EE+K +L     S    VWWD  C+ RR
Sbjct: 18  MKIPSFQGRNDPDVYLEWERKVELIFECHNYSEEKKVKLAAVEFSDYAIVWWDQFCKERR 77

Query: 191 RMGAQPIKTWSLMK 232
           R G +P+++W  MK
Sbjct: 78  RYGERPVESWIEMK 91


>ref|XP_006826164.1| hypothetical protein AMTR_s05090p00005430, partial [Amborella
           trichopoda] gi|548830328|gb|ERM93401.1| hypothetical
           protein AMTR_s05090p00005430, partial [Amborella
           trichopoda]
          Length = 235

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/74 (35%), Positives = 40/74 (54%)
 Frame = +2

Query: 11  LKLPLLCGTLGPYDYEAWKQKVESLFYSYGVREEEKFQLVLKSLSYEVNVWWDCKCENRR 190
           +++P   G   P  Y  W++K+E +F  +   + +K +L     +    VWWD  C NRR
Sbjct: 107 MRIPAFQGKSDPEAYLEWEKKMELVFDCHNYSDMKKVKLAAIEFTDYAIVWWDQLCTNRR 166

Query: 191 RMGAQPIKTWSLMK 232
           R G +PI+TW  MK
Sbjct: 167 RSGDRPIETWEAMK 180


>emb|CAN74973.1| hypothetical protein VITISV_001042 [Vitis vinifera]
          Length = 1281

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/74 (37%), Positives = 41/74 (55%)
 Frame = +2

Query: 11  LKLPLLCGTLGPYDYEAWKQKVESLFYSYGVREEEKFQLVLKSLSYEVNVWWDCKCENRR 190
           +K+PL  G   P  Y  W++KVE +F  +   EE+  +LV+   +    +WWD    NRR
Sbjct: 113 MKIPLFQGKNDPKVYLEWEKKVEFIFECHNYSEEKNVKLVVIEFTDYAIIWWDQLVMNRR 172

Query: 191 RMGAQPIKTWSLMK 232
           R   +PI+TW  MK
Sbjct: 173 RNYERPIETWEEMK 186


>gb|ABQ59165.1| putative gag protein [(Populus tomentosa x P. bolleana) x P.
           tomentosa]
          Length = 180

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/74 (35%), Positives = 42/74 (56%)
 Frame = +2

Query: 11  LKLPLLCGTLGPYDYEAWKQKVESLFYSYGVREEEKFQLVLKSLSYEVNVWWDCKCENRR 190
           LK+P   G   P  Y  W++KV+ +F  +   E++K +LV+   +    +WWD    +RR
Sbjct: 10  LKIPTFQGKNDPEAYLEWEKKVDWIFDCHSYSEQKKVKLVIIEFTEYALIWWDQIVISRR 69

Query: 191 RMGAQPIKTWSLMK 232
           R G +P++TW  MK
Sbjct: 70  RNGERPVQTWGEMK 83


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