BLASTX nr result
ID: Catharanthus22_contig00029724
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00029724
(262 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004958023.1| PREDICTED: chlorophyll a-b binding protein o... 168 6e-40
gb|EMJ13010.1| hypothetical protein PRUPE_ppa009987mg [Prunus pe... 168 6e-40
gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding ... 168 6e-40
tpg|DAA63127.1| TPA: chlorophyll a-b binding protein of LHCII ty... 168 6e-40
ref|XP_002460856.1| hypothetical protein SORBIDRAFT_02g036380 [S... 168 6e-40
ref|NP_001150523.1| chlorophyll a-b binding protein of LHCII typ... 168 6e-40
gb|ESW21625.1| hypothetical protein PHAVU_005G085800g [Phaseolus... 167 1e-39
ref|XP_006280962.1| hypothetical protein CARUB_v10026963mg [Caps... 167 1e-39
gb|EMT32357.1| Chlorophyll a-b binding protein of LHCII type III... 167 1e-39
gb|EMS46762.1| Chlorophyll a-b binding protein of LHCII type III... 167 1e-39
sp|P27523.1|CB23_HORVU RecName: Full=Chlorophyll a-b binding pro... 167 1e-39
gb|AEZ52400.1| LHCII type III chlorophyll a/b binding protein [W... 167 1e-39
ref|NP_200238.1| light-harvesting chlorophyll B-binding protein ... 166 2e-39
ref|XP_006401590.1| hypothetical protein EUTSA_v10014406mg [Eutr... 166 2e-39
ref|XP_002864323.1| light-harvesting chlorophyll binding protein... 166 2e-39
dbj|BAH56768.1| AT5G54270 [Arabidopsis thaliana] 166 2e-39
gb|EXB89638.1| Chlorophyll a-b binding protein 13 [Morus notabilis] 166 3e-39
ref|XP_006847429.1| hypothetical protein AMTR_s00153p00078810 [A... 166 3e-39
ref|XP_004244187.1| PREDICTED: chlorophyll a-b binding protein 1... 166 4e-39
gb|AAT42191.1| chloroplast chlorophyll a-b binding protein [Nico... 166 4e-39
>ref|XP_004958023.1| PREDICTED: chlorophyll a-b binding protein of LHCII type III,
chloroplastic-like [Setaria italica]
Length = 268
Score = 168 bits (426), Expect = 6e-40
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNNLYPGG YF
Sbjct: 138 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNNLYPGGQYF 197
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 198 DPLGLADDPVTFAELKVKEIKNGRLA 223
>gb|EMJ13010.1| hypothetical protein PRUPE_ppa009987mg [Prunus persica]
Length = 269
Score = 168 bits (426), Expect = 6e-40
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNNLYPGG YF
Sbjct: 139 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNNLYPGGQYF 198
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 199 DPLGLADDPVTFAELKVKEIKNGRLA 224
>gb|AAD27877.1|AF139465_1 LHCII type III chlorophyll a/b binding protein [Vigna radiata]
Length = 269
Score = 168 bits (426), Expect = 6e-40
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNNLYPGG YF
Sbjct: 139 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYF 198
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 199 DPLGLADDPATFAELKVKEIKNGRLA 224
>tpg|DAA63127.1| TPA: chlorophyll a-b binding protein of LHCII type III isoform 1
[Zea mays] gi|414887114|tpg|DAA63128.1| TPA: chlorophyll
a-b binding protein of LHCII type III isoform 2 [Zea
mays]
Length = 269
Score = 168 bits (426), Expect = 6e-40
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNNLYPGG YF
Sbjct: 139 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNNLYPGGQYF 198
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 199 DPLGLADDPVTFAELKVKEIKNGRLA 224
>ref|XP_002460856.1| hypothetical protein SORBIDRAFT_02g036380 [Sorghum bicolor]
gi|241924233|gb|EER97377.1| hypothetical protein
SORBIDRAFT_02g036380 [Sorghum bicolor]
Length = 268
Score = 168 bits (426), Expect = 6e-40
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNNLYPGG YF
Sbjct: 138 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNNLYPGGQYF 197
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 198 DPLGLADDPVTFAELKVKEIKNGRLA 223
>ref|NP_001150523.1| chlorophyll a-b binding protein of LHCII type III [Zea mays]
gi|195613464|gb|ACG28562.1| chlorophyll a-b binding
protein of LHCII type III [Zea mays]
gi|195639878|gb|ACG39407.1| chlorophyll a-b binding
protein of LHCII type III [Zea mays]
Length = 272
Score = 168 bits (426), Expect = 6e-40
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNNLYPGG YF
Sbjct: 142 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNNLYPGGQYF 201
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 202 DPLGLADDPVTFAELKVKEIKNGRLA 227
>gb|ESW21625.1| hypothetical protein PHAVU_005G085800g [Phaseolus vulgaris]
Length = 269
Score = 167 bits (423), Expect = 1e-39
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGNNLYPGG YF
Sbjct: 139 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNNLYPGGQYF 198
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 199 DPLGLADDPVNFAELKVKEIKNGRLA 224
>ref|XP_006280962.1| hypothetical protein CARUB_v10026963mg [Capsella rubella]
gi|482549666|gb|EOA13860.1| hypothetical protein
CARUB_v10026963mg [Capsella rubella]
Length = 265
Score = 167 bits (423), Expect = 1e-39
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 135 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYF 194
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 195 DPLGLADDPVTFAELKVKEIKNGRLA 220
>gb|EMT32357.1| Chlorophyll a-b binding protein of LHCII type III, chloroplastic
[Aegilops tauschii]
Length = 268
Score = 167 bits (423), Expect = 1e-39
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 138 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYF 197
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 198 DPLGLADDPVTFAELKVKEIKNGRLA 223
>gb|EMS46762.1| Chlorophyll a-b binding protein of LHCII type III, chloroplastic
[Triticum urartu]
Length = 263
Score = 167 bits (423), Expect = 1e-39
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 133 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYF 192
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 193 DPLGLADDPVTFAELKVKEIKNGRLA 218
>sp|P27523.1|CB23_HORVU RecName: Full=Chlorophyll a-b binding protein of LHCII type III,
chloroplastic; Short=CAB; Flags: Precursor
gi|19023|emb|CAA44881.1| type III LHCII CAB precursor
protein [Hordeum vulgare]
Length = 268
Score = 167 bits (423), Expect = 1e-39
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 138 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYF 197
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 198 DPLGLADDPVTFAELKVKEIKNGRLA 223
>gb|AEZ52400.1| LHCII type III chlorophyll a/b binding protein [Wolffia
australiana]
Length = 264
Score = 167 bits (423), Expect = 1e-39
Identities = 82/86 (95%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 134 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYF 193
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 194 DPLGLADDPVTFAELKVKEIKNGRLA 219
>ref|NP_200238.1| light-harvesting chlorophyll B-binding protein 3 [Arabidopsis
thaliana] gi|4741952|gb|AAD28773.1|AF134126_1 Lhcb3
protein [Arabidopsis thaliana]
gi|5002210|gb|AAD37362.1|AF143691_1 type III chlorophyll
a/b binding protein [Arabidopsis thaliana]
gi|13605754|gb|AAK32870.1|AF361858_1 AT5g54270/MDK4_9
[Arabidopsis thaliana]
gi|13926339|gb|AAK49633.1|AF372917_1 AT5g54270/MDK4_9
[Arabidopsis thaliana] gi|9759500|dbj|BAB10750.1| Lhcb3
chlorophyll a/b binding protein [Arabidopsis thaliana]
gi|16323262|gb|AAL15365.1| AT5g54270/MDK4_9 [Arabidopsis
thaliana] gi|332009094|gb|AED96477.1| light-harvesting
chlorophyll B-binding protein 3 [Arabidopsis thaliana]
Length = 265
Score = 166 bits (421), Expect = 2e-39
Identities = 81/86 (94%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 135 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLYPGGQYF 194
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 195 DPLGLADDPVTFAELKVKEIKNGRLA 220
>ref|XP_006401590.1| hypothetical protein EUTSA_v10014406mg [Eutrema salsugineum]
gi|312281753|dbj|BAJ33742.1| unnamed protein product
[Thellungiella halophila] gi|557102680|gb|ESQ43043.1|
hypothetical protein EUTSA_v10014406mg [Eutrema
salsugineum]
Length = 265
Score = 166 bits (421), Expect = 2e-39
Identities = 81/86 (94%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 135 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLYPGGQYF 194
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 195 DPLGLADDPVTFAELKVKEIKNGRLA 220
>ref|XP_002864323.1| light-harvesting chlorophyll binding protein 3 [Arabidopsis lyrata
subsp. lyrata] gi|297310158|gb|EFH40582.1|
light-harvesting chlorophyll binding protein 3
[Arabidopsis lyrata subsp. lyrata]
Length = 265
Score = 166 bits (421), Expect = 2e-39
Identities = 81/86 (94%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 135 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLYPGGQYF 194
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 195 DPLGLADDPVTFAELKVKEIKNGRLA 220
>dbj|BAH56768.1| AT5G54270 [Arabidopsis thaliana]
Length = 162
Score = 166 bits (421), Expect = 2e-39
Identities = 81/86 (94%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 32 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLDGVGEGNDLYPGGQYF 91
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 92 DPLGLADDPVTFAELKVKEIKNGRLA 117
>gb|EXB89638.1| Chlorophyll a-b binding protein 13 [Morus notabilis]
Length = 264
Score = 166 bits (420), Expect = 3e-39
Identities = 81/86 (94%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGLDGVGEGN+LYPGG YF
Sbjct: 134 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLDGVGEGNDLYPGGQYF 193
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 194 DPLGLADDPVTFAELKVKEIKNGRLA 219
>ref|XP_006847429.1| hypothetical protein AMTR_s00153p00078810 [Amborella trichopoda]
gi|548850595|gb|ERN09010.1| hypothetical protein
AMTR_s00153p00078810 [Amborella trichopoda]
Length = 263
Score = 166 bits (420), Expect = 3e-39
Identities = 81/86 (94%), Positives = 83/86 (96%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEG+RINGL GVGEGNNLYPGGTYF
Sbjct: 133 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGYRINGLPGVGEGNNLYPGGTYF 192
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 193 DPLGLADDPITFAELKVKEIKNGRLA 218
>ref|XP_004244187.1| PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like
[Solanum lycopersicum] gi|565388732|ref|XP_006360126.1|
PREDICTED: chlorophyll a-b binding protein 13,
chloroplastic-like [Solanum tuberosum]
Length = 262
Score = 166 bits (419), Expect = 4e-39
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGL GVGEGNNLYPGG YF
Sbjct: 132 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYF 191
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 192 DPLGLADDPTTFAELKVKEIKNGRLA 217
>gb|AAT42191.1| chloroplast chlorophyll a-b binding protein [Nicotiana tabacum]
Length = 199
Score = 166 bits (419), Expect = 4e-39
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = -3
Query: 260 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNNLYPGGTYF 81
QIFSEGGLDYLGNPNLVHAQSILAVLGFQV+LMGLVEGFRINGL GVGEGNNLYPGG YF
Sbjct: 69 QIFSEGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNNLYPGGQYF 128
Query: 80 DPLGLADDPEAFAELKVKEIKNGRLA 3
DPLGLADDP FAELKVKEIKNGRLA
Sbjct: 129 DPLGLADDPTTFAELKVKEIKNGRLA 154