BLASTX nr result

ID: Catharanthus22_contig00029589 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00029589
         (590 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004291473.1| PREDICTED: UPF0481 protein At3g47200-like [F...    64   4e-08
ref|XP_006840327.1| hypothetical protein AMTR_s00045p00089930 [A...    59   7e-07
ref|XP_006840326.1| hypothetical protein AMTR_s00045p00089710 [A...    57   3e-06

>ref|XP_004291473.1| PREDICTED: UPF0481 protein At3g47200-like [Fragaria vesca subsp.
           vesca]
          Length = 429

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 48/163 (29%), Positives = 84/163 (51%), Gaps = 24/163 (14%)
 Frame = +2

Query: 11  GSRGIRFRNWFICATLTLPSLKVNHDLNVLLTNLKFYEIAQ---QQKEVRSYLKFLSELI 181
           GS    F+  F   TL +P L ++    V +TNL  +E +Q   ++K +  Y  FL+ L+
Sbjct: 260 GSNTNMFQVKFKHGTLEMPKLTISDQTEVTITNLLAFEQSQCKDEEKYINDYFVFLNCLV 319

Query: 182 STYEDVNLLAKKGIIEAGTSEEKQKFMEMVTILADKEIAH-------------HHRHVIG 322
           +T++DV LL K GI++    + K+ F  ++  L D  + +             +  + +G
Sbjct: 320 NTHQDVALLVKSGILDNKLGDNKKGF-TLIKNLVDGVVDNKDYFYFINLCDDLNKYYTMG 378

Query: 323 R--VKDYSV-----FPWDKFKYVAILVFA-LTIAQTVFSVLSY 427
           R  +K+Y V      PW   + +A ++F  LT+ QT+FS++SY
Sbjct: 379 RHQLKEYLVTHFLYSPWATKEIIAAVIFLFLTLIQTMFSIMSY 421


>ref|XP_006840327.1| hypothetical protein AMTR_s00045p00089930 [Amborella trichopoda]
           gi|548842045|gb|ERN02002.1| hypothetical protein
           AMTR_s00045p00089930 [Amborella trichopoda]
          Length = 524

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
 Frame = +2

Query: 50  ATLTLPSLKVNHDLNVLLTNLKFYEIAQQQKEVR--SYLKFLSELISTYEDVNLLAKKGI 223
           ATLTLP L V+  + VLL NL  +E+     E +  SY++F+ +L+ T EDV LL  K +
Sbjct: 382 ATLTLPLLVVSDIMEVLLHNLVLHELLHPSLEYKVISYVRFMRDLVRTTEDVQLLCSKKV 441

Query: 224 I--EAGTSEEKQKFMEMVTILADKEIAH--HHRHVIGR-VKDYSVFPWDKF-----KYVA 373
           +  E     E   F + +   A K  +   H  H++ R + +YS   W K+      Y +
Sbjct: 442 LVNELEGEIEVVLFFKGLCHFAVKATSEDTHEVHMLRRSINNYSQPMWTKWGMWVNTYFS 501

Query: 374 ILVFALTIAQTVFSVLSY 427
              F LT+ QT++++L+Y
Sbjct: 502 AF-FVLTLIQTIYAILAY 518


>ref|XP_006840326.1| hypothetical protein AMTR_s00045p00089710 [Amborella trichopoda]
           gi|548842044|gb|ERN02001.1| hypothetical protein
           AMTR_s00045p00089710 [Amborella trichopoda]
          Length = 548

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
 Frame = +2

Query: 8   GGSRGIRF-RNWFICATLTLPSLKVNHDLNVLLTNLKFYEIAQQQKE--VRSYLKFLSEL 178
           G  +G+ F ++    A LTLP L VN  + +LL NL  YE+   Q E  + SY+KF+ +L
Sbjct: 391 GSLKGMEFHKSMHQGAILTLPILLVNDIMEILLLNLVLYELLHTQLECAIISYVKFMRDL 450

Query: 179 ISTYEDVNLLAKKGII--EAGTSEEKQKFMEMVTILADKEIAHHHRHVI---GRVKDYSV 343
           + + EDV +L    ++  E         F   +   A   I+     V+     + +YS 
Sbjct: 451 VRSEEDVRVLCSSKVLVNELEGEAHVVSFFNGLCHFAITSISGDTHDVLMLRRSINNYSQ 510

Query: 344 FPWDKFKYVA----ILVFALTIAQTVFSVLSY 427
             W K++ +      + F LT+ QT++++L+Y
Sbjct: 511 PVWTKWRNLVHTYFSVFFLLTLVQTIYAILAY 542


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