BLASTX nr result
ID: Catharanthus22_contig00029557
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00029557
(821 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN70635.1| hypothetical protein VITISV_019049 [Vitis vinifera] 176 7e-87
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212... 173 3e-86
emb|CAN60378.1| hypothetical protein VITISV_032103 [Vitis vinifera] 167 5e-84
emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera] 162 7e-84
emb|CAN64324.1| hypothetical protein VITISV_005640 [Vitis vinifera] 156 2e-80
gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group] 152 2e-79
emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group] 151 3e-79
gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza s... 151 3e-79
gb|ABF93543.1| retrotransposon protein, putative, unclassified [... 151 3e-79
gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japoni... 151 3e-79
gb|ABF94836.1| retrotransposon protein, putative, unclassified [... 151 3e-79
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera] 177 5e-79
emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis] 146 2e-76
emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera] 167 2e-76
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty... 157 6e-76
gb|EOY13955.1| Uncharacterized protein TCM_032871 [Theobroma cacao] 145 2e-75
gb|EOY19086.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) ... 159 2e-75
gb|AAN40025.1| putative gag-pol polyprotein [Zea mays] 153 1e-74
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera] 180 3e-74
gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays] 150 3e-74
>emb|CAN70635.1| hypothetical protein VITISV_019049 [Vitis vinifera]
Length = 691
Score = 176 bits (446), Expect(3) = 7e-87
Identities = 85/117 (72%), Positives = 100/117 (85%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENWMIA+ E+LNQFE++ + +LVPRP+ QSVIGTKWVFRNK+DE G I+RNKA LVAQGY
Sbjct: 248 ENWMIAMQEKLNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDEBGIIVRNKAXLVAQGY 307
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
NQ E ID++ETFAPVARLE+IRML AFAC+K L+QMDVKS FLNGF +EVYV Q
Sbjct: 308 NQXEXIDYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEVYVEQ 364
Score = 103 bits (258), Expect(3) = 7e-87
Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGF+ PNHVFKL + LYG KQAP AWYERLSKFLL+ GF G +D TLF K +D+
Sbjct: 366 PGFQSFNFPNHVFKLKKXLYGLKQAPRAWYERLSKFLLKKGFKMGKIDTTLFIKTKEKDM 425
Query: 541 LIVQVYVDDIIFGANNIS 594
L+VQ+YVDDIIFGA N S
Sbjct: 426 LLVQIYVDDIIFGATNDS 443
Score = 89.7 bits (221), Expect(3) = 7e-87
Identities = 45/68 (66%), Positives = 54/68 (79%)
Frame = +3
Query: 600 MPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSEK 779
M EFE SM+GELNFFLGLQIKQ KEG I+QAKYI++LLK++ M AK KTPM +S K
Sbjct: 452 MHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIKDLLKRFNMEEAKVMKTPMXSSIK 511
Query: 780 LENDEKGE 803
L+ DEKG+
Sbjct: 512 LDMDEKGK 519
>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 173 bits (439), Expect(3) = 3e-86
Identities = 85/117 (72%), Positives = 99/117 (84%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
E W++A+ EELNQFE+N + KLVPRP+ S+IGTKWVFRNK+DE GNIIRNKARLVAQGY
Sbjct: 1651 EFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNKMDENGNIIRNKARLVAQGY 1710
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
QEE ID++ETFAPVARLE+IRML AFA YK L+QMDVKS FLNG+ +EVYV Q
Sbjct: 1711 CQEEGIDYEETFAPVARLEAIRMLLAFASYKNFILYQMDVKSAFLNGYIVEEVYVEQ 1767
Score = 106 bits (264), Expect(3) = 3e-86
Identities = 52/78 (66%), Positives = 60/78 (76%), Gaps = 3/78 (3%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE PNHV+KL +ALYG KQAP AWY+RLSKFLLEN F G +D TLF K + D+
Sbjct: 1769 PGFESFDLPNHVYKLEKALYGLKQAPRAWYDRLSKFLLENDFKMGKIDNTLFIKVKNNDM 1828
Query: 541 LIVQVYVDDIIFGANNIS 594
LIVQ+YVDDIIFG+ N S
Sbjct: 1829 LIVQIYVDDIIFGSTNSS 1846
Score = 88.2 bits (217), Expect(3) = 3e-86
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = +3
Query: 600 MPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSEK 779
M EFE SM+GEL+FFLGLQIKQ K+G+ ISQ KY R+LLKK+ ++ K +KTPMST+ K
Sbjct: 1855 MHNEFEMSMMGELSFFLGLQIKQLKDGIFISQEKYTRDLLKKFKLNEGKVAKTPMSTTTK 1914
Query: 780 LENDEKG 800
L+ DEKG
Sbjct: 1915 LDKDEKG 1921
>emb|CAN60378.1| hypothetical protein VITISV_032103 [Vitis vinifera]
Length = 1359
Score = 167 bits (422), Expect(3) = 5e-84
Identities = 81/117 (69%), Positives = 100/117 (85%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENWMIA+ EELNQFE++ + +L+PRP+ QSVIGT+WVFRNK++E I+RNKARLVA+ +
Sbjct: 769 ENWMIAMQEELNQFERSEVWELMPRPSNQSVIGTRWVFRNKMNENDIIVRNKARLVAKCF 828
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
NQEE ID++ETFA VARLE+IRML AFAC+K L+QMDVKSVFLNGF +EVYV Q
Sbjct: 829 NQEEGIDYEETFASVARLEAIRMLLAFACFKDFVLYQMDVKSVFLNGFINEEVYVEQ 885
Score = 104 bits (259), Expect(3) = 5e-84
Identities = 49/73 (67%), Positives = 57/73 (78%)
Frame = +1
Query: 376 FEKPNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDILIVQV 555
F PNHVFKL +ALYG KQAP AWYERLSKFLL+ GF +D TLF K +D+L+VQ+
Sbjct: 892 FNFPNHVFKLKKALYGLKQAPRAWYERLSKFLLKKGFKMAKIDTTLFIKTKEKDMLLVQI 951
Query: 556 YVDDIIFGANNIS 594
YVDDIIFGA N+S
Sbjct: 952 YVDDIIFGATNVS 964
Score = 89.0 bits (219), Expect(3) = 5e-84
Identities = 45/67 (67%), Positives = 52/67 (77%)
Frame = +3
Query: 600 MPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSEK 779
M EFE SM+GELNFFLGLQIKQ K+G I+QAKYIR+LLK++ M AK KTPMS K
Sbjct: 973 MHSEFEMSMMGELNFFLGLQIKQPKKGTFINQAKYIRDLLKRFNMEEAKTMKTPMSLYIK 1032
Query: 780 LENDEKG 800
L+ DEKG
Sbjct: 1033 LDKDEKG 1039
>emb|CAN71245.1| hypothetical protein VITISV_011091 [Vitis vinifera]
Length = 550
Score = 162 bits (409), Expect(3) = 7e-84
Identities = 78/109 (71%), Positives = 92/109 (84%)
Frame = +2
Query: 41 EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGYNQEEEIDF 220
EELNQFE++ + +LVPRP QSVIGT+WVFRNK+DE G IIRNKARLVAQG+NQEE D+
Sbjct: 191 EELNQFERSEVWELVPRPQNQSVIGTRWVFRNKMDENGIIIRNKARLVAQGFNQEEGTDY 250
Query: 221 DETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
+ETF PVARLE+IRM+ AFAC+K L+QMDVKS FLNGF +EVYV Q
Sbjct: 251 EETFTPVARLEAIRMVLAFACFKDFVLYQMDVKSAFLNGFINEEVYVEQ 299
Score = 105 bits (261), Expect(3) = 7e-84
Identities = 50/78 (64%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGF+ PNHVFKL + LYG KQ+P AWYERLSKFLL+ GF G +D TLF K D+
Sbjct: 301 PGFQSFNFPNHVFKLKKTLYGLKQSPRAWYERLSKFLLKKGFKMGKIDTTLFIKTKENDM 360
Query: 541 LIVQVYVDDIIFGANNIS 594
L+VQ+YVDDIIFGA N+S
Sbjct: 361 LLVQIYVDDIIFGATNVS 378
Score = 92.8 bits (229), Expect(3) = 7e-84
Identities = 45/71 (63%), Positives = 56/71 (78%)
Frame = +3
Query: 600 MPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSEK 779
M EFE SM+GELNFFLGL+IKQ KEG I+QAKYIR++LK++ M AK KTPMS+S K
Sbjct: 387 MHSEFEMSMMGELNFFLGLKIKQLKEGTFINQAKYIRDILKRFNMEEAKTMKTPMSSSIK 446
Query: 780 LENDEKGEATN 812
+ DEKG++ N
Sbjct: 447 FDKDEKGKSVN 457
>emb|CAN64324.1| hypothetical protein VITISV_005640 [Vitis vinifera]
Length = 557
Score = 156 bits (394), Expect(3) = 2e-80
Identities = 76/109 (69%), Positives = 92/109 (84%)
Frame = +2
Query: 41 EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGYNQEEEIDF 220
EELNQF+++ + +LVPRP+ QSVIGTKWVFRNK+DE I+RNKARLVAQG+NQEE ID+
Sbjct: 3 EELNQFKRSEVWELVPRPSNQSVIGTKWVFRNKMDENDIIVRNKARLVAQGFNQEEGIDY 62
Query: 221 DETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
+ETFA VARLE+IRML A AC+K L+Q+DVKS FLNGF +EVYV Q
Sbjct: 63 EETFALVARLEAIRMLLALACFKDFILYQVDVKSAFLNGFINEEVYVEQ 111
Score = 102 bits (254), Expect(3) = 2e-80
Identities = 49/78 (62%), Positives = 58/78 (74%), Gaps = 3/78 (3%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGF+ PNHVFKL +ALYG KQAP AWYERLSKFLL+ F G +D TLF K D+
Sbjct: 113 PGFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKFLLKKVFKMGKIDTTLFIKTKENDM 172
Query: 541 LIVQVYVDDIIFGANNIS 594
L++Q+YVDDIIFG N+S
Sbjct: 173 LLIQIYVDDIIFGVTNVS 190
Score = 89.7 bits (221), Expect(3) = 2e-80
Identities = 45/69 (65%), Positives = 55/69 (79%)
Frame = +3
Query: 600 MPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSEK 779
M EFE S++GELNFFLGLQIKQ KEG I+QAKYIR+LLK+ M AK KTPMS+S K
Sbjct: 199 MHSEFEMSIMGELNFFLGLQIKQLKEGTFINQAKYIRDLLKRLNMEEAKTMKTPMSSSIK 258
Query: 780 LENDEKGEA 806
L+ D+KG++
Sbjct: 259 LDKDKKGKS 267
>gb|AAW57789.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1799
Score = 152 bits (384), Expect(3) = 2e-79
Identities = 77/117 (65%), Positives = 91/117 (77%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENW+ A+ EEL FE+N + LV P SVIGTKWVF+NKL E G+I+RNKARLVAQG+
Sbjct: 1300 ENWVNAMHEELENFERNKVWSLVEPPLGFSVIGTKWVFKNKLGEDGSIVRNKARLVAQGF 1359
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
Q E +DF+ETFAPVARLE+IR+L AFA KG LFQMDVKS FLNG ++EVYV Q
Sbjct: 1360 TQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQ 1416
Score = 102 bits (255), Expect(3) = 2e-79
Identities = 51/76 (67%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Frame = +1
Query: 370 PGFEKP---NHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE P NHVFKL +ALYG KQAP AWYERL FLL+NGF G VDKTLFT D
Sbjct: 1418 PGFENPKFPNHVFKLDKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDF 1477
Query: 541 LIVQVYVDDIIFGANN 588
L+VQ+YVDDIIFG ++
Sbjct: 1478 LLVQIYVDDIIFGGSS 1493
Score = 90.1 bits (222), Expect(3) = 2e-79
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M EFE SM+GEL FFLGLQIKQTKEG+ + Q KY +ELLKK+ M+ KP TPM+T+
Sbjct: 1503 VMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTS 1562
Query: 777 KLENDEKGEATNQKE 821
L DE GE +Q+E
Sbjct: 1563 SLGPDEDGEEVDQRE 1577
>emb|CAE03600.2| OSJNBb0004A17.2 [Oryza sativa Japonica Group]
Length = 2256
Score = 151 bits (381), Expect(3) = 3e-79
Identities = 76/117 (64%), Positives = 91/117 (77%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENW+ A+ EEL FE+N + LV P +VIGTKWVF+NKL E G+I+RNKARLVAQG+
Sbjct: 1275 ENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGF 1334
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
Q E +DF+ETFAPVARLE+IR+L AFA KG LFQMDVKS FLNG ++EVYV Q
Sbjct: 1335 TQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQ 1391
Score = 103 bits (256), Expect(3) = 3e-79
Identities = 51/76 (67%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Frame = +1
Query: 370 PGFEKP---NHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE P NHVFKL +ALYG KQAP AWYERL FLL+NGF G VDKTLFT D
Sbjct: 1393 PGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDF 1452
Query: 541 LIVQVYVDDIIFGANN 588
L+VQ+YVDDIIFG ++
Sbjct: 1453 LLVQIYVDDIIFGGSS 1468
Score = 90.1 bits (222), Expect(3) = 3e-79
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M EFE SM+GEL FFLGLQIKQTKEG+ + Q KY +ELLKK+ M+ KP TPM+T+
Sbjct: 1478 VMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTS 1537
Query: 777 KLENDEKGEATNQKE 821
L DE GE +Q+E
Sbjct: 1538 SLGPDEDGEEVDQRE 1552
>gb|AAN60494.1| Putative Zea mays retrotransposon Opie-2 [Oryza sativa Japonica
Group]
Length = 2145
Score = 151 bits (381), Expect(3) = 3e-79
Identities = 76/117 (64%), Positives = 91/117 (77%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENW+ A+ EEL FE+N + LV P +VIGTKWVF+NKL E G+I+RNKARLVAQG+
Sbjct: 1296 ENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGF 1355
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
Q E +DF+ETFAPVARLE+IR+L AFA KG LFQMDVKS FLNG ++EVYV Q
Sbjct: 1356 TQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQ 1412
Score = 103 bits (256), Expect(3) = 3e-79
Identities = 51/76 (67%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Frame = +1
Query: 370 PGFEKP---NHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE P NHVFKL +ALYG KQAP AWYERL FLL+NGF G VDKTLFT D
Sbjct: 1414 PGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDF 1473
Query: 541 LIVQVYVDDIIFGANN 588
L+VQ+YVDDIIFG ++
Sbjct: 1474 LLVQIYVDDIIFGGSS 1489
Score = 90.1 bits (222), Expect(3) = 3e-79
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M EFE SM+GEL FFLGLQIKQTKEG+ + Q KY +ELLKK+ M+ KP TPM+T+
Sbjct: 1499 VMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTS 1558
Query: 777 KLENDEKGEATNQKE 821
L DE GE +Q+E
Sbjct: 1559 SLGPDEDGEEVDQRE 1573
>gb|ABF93543.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 2124
Score = 151 bits (381), Expect(3) = 3e-79
Identities = 76/117 (64%), Positives = 91/117 (77%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENW+ A+ EEL FE+N + LV P +VIGTKWVF+NKL E G+I+RNKARLVAQG+
Sbjct: 1275 ENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGF 1334
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
Q E +DF+ETFAPVARLE+IR+L AFA KG LFQMDVKS FLNG ++EVYV Q
Sbjct: 1335 TQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQ 1391
Score = 103 bits (256), Expect(3) = 3e-79
Identities = 51/76 (67%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Frame = +1
Query: 370 PGFEKP---NHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE P NHVFKL +ALYG KQAP AWYERL FLL+NGF G VDKTLFT D
Sbjct: 1393 PGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDF 1452
Query: 541 LIVQVYVDDIIFGANN 588
L+VQ+YVDDIIFG ++
Sbjct: 1453 LLVQIYVDDIIFGGSS 1468
Score = 90.1 bits (222), Expect(3) = 3e-79
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M EFE SM+GEL FFLGLQIKQTKEG+ + Q KY +ELLKK+ M+ KP TPM+T+
Sbjct: 1478 VMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTS 1537
Query: 777 KLENDEKGEATNQKE 821
L DE GE +Q+E
Sbjct: 1538 SLGPDEDGEEVDQRE 1552
>gb|AAO37957.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|108712101|gb|ABF99896.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1969
Score = 151 bits (381), Expect(3) = 3e-79
Identities = 76/117 (64%), Positives = 91/117 (77%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENW+ A+ EEL FE+N + LV P +VIGTKWVF+NKL E G+I+RNKARLVAQG+
Sbjct: 1296 ENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGF 1355
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
Q E +DF+ETFAPVARLE+IR+L AFA KG LFQMDVKS FLNG ++EVYV Q
Sbjct: 1356 TQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQ 1412
Score = 103 bits (256), Expect(3) = 3e-79
Identities = 51/76 (67%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Frame = +1
Query: 370 PGFEKP---NHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE P NHVFKL +ALYG KQAP AWYERL FLL+NGF G VDKTLFT D
Sbjct: 1414 PGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDF 1473
Query: 541 LIVQVYVDDIIFGANN 588
L+VQ+YVDDIIFG ++
Sbjct: 1474 LLVQIYVDDIIFGGSS 1489
Score = 90.1 bits (222), Expect(3) = 3e-79
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M EFE SM+GEL FFLGLQIKQTKEG+ + Q KY +ELLKK+ M+ KP TPM+T+
Sbjct: 1499 VMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTS 1558
Query: 777 KLENDEKGEATNQKE 821
L DE GE +Q+E
Sbjct: 1559 SLGPDEDGEEVDQRE 1573
>gb|ABF94836.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1948
Score = 151 bits (381), Expect(3) = 3e-79
Identities = 76/117 (64%), Positives = 91/117 (77%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENW+ A+ EEL FE+N + LV P +VIGTKWVF+NKL E G+I+RNKARLVAQG+
Sbjct: 1275 ENWVNAMHEELENFERNKVWSLVEPPLGFNVIGTKWVFKNKLGEDGSIVRNKARLVAQGF 1334
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
Q E +DF+ETFAPVARLE+IR+L AFA KG LFQMDVKS FLNG ++EVYV Q
Sbjct: 1335 TQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLFQMDVKSAFLNGVIEEEVYVKQ 1391
Score = 103 bits (256), Expect(3) = 3e-79
Identities = 51/76 (67%), Positives = 57/76 (75%), Gaps = 3/76 (3%)
Frame = +1
Query: 370 PGFEKP---NHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE P NHVFKL +ALYG KQAP AWYERL FLL+NGF G VDKTLFT D
Sbjct: 1393 PGFENPKFPNHVFKLEKALYGLKQAPRAWYERLKTFLLQNGFEMGAVDKTLFTLHSGIDF 1452
Query: 541 LIVQVYVDDIIFGANN 588
L+VQ+YVDDIIFG ++
Sbjct: 1453 LLVQIYVDDIIFGGSS 1468
Score = 90.1 bits (222), Expect(3) = 3e-79
Identities = 44/75 (58%), Positives = 55/75 (73%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M EFE SM+GEL FFLGLQIKQTKEG+ + Q KY +ELLKK+ M+ KP TPM+T+
Sbjct: 1478 VMSREFEMSMMGELTFFLGLQIKQTKEGIFVHQTKYSKELLKKFDMADCKPIATPMATTS 1537
Query: 777 KLENDEKGEATNQKE 821
L DE GE +Q+E
Sbjct: 1538 SLGPDEDGEEVDQRE 1552
>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
Length = 898
Score = 177 bits (450), Expect(3) = 5e-79
Identities = 85/114 (74%), Positives = 99/114 (86%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENWMIA+ EELNQFE++ + +LVPRP+ QSVIGTKWVFRNK+DE G I+RNKARLVAQGY
Sbjct: 634 ENWMIAMQEELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGY 693
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVY 358
NQE ID++ETFAPVARLE+IRML AFAC+K L+QMDVKS FLNGF +EVY
Sbjct: 694 NQEXXIDYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSXFLNGFINEEVY 747
Score = 103 bits (258), Expect(3) = 5e-79
Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 3/78 (3%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGF+ PNHVFKL +ALYG KQAP AWYERLSKFL + GF G +D TLF K +D+
Sbjct: 752 PGFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKFLXKKGFKMGKIDTTLFIKTKEKDM 811
Query: 541 LIVQVYVDDIIFGANNIS 594
L+VQ+YVDDIIFGA N S
Sbjct: 812 LLVQIYVDDIIFGATNBS 829
Score = 62.0 bits (149), Expect(3) = 5e-79
Identities = 30/42 (71%), Positives = 36/42 (85%)
Frame = +3
Query: 600 MPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKK 725
M EFE SM+GELNFFLGLQIKQ KEG I+QAKYI++LL++
Sbjct: 838 MHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIKDLLQE 879
>emb|CCI55376.1| PH01B035L11.21 [Phyllostachys edulis]
Length = 2029
Score = 146 bits (369), Expect(3) = 2e-76
Identities = 73/117 (62%), Positives = 90/117 (76%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
E+W+ A+ EEL FE+N + LV P ++IGTKWVF+NK E G IIRNKARLVAQG+
Sbjct: 1482 ESWVNAMHEELENFERNKVWSLVEPPRGHNIIGTKWVFKNKQSEDGVIIRNKARLVAQGF 1541
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
+Q E +DF+ETFAPVARLE+IR+L AFA KG L+QMDVKS FLNG ++EVYV Q
Sbjct: 1542 SQVEGLDFEETFAPVARLEAIRILLAFAASKGFKLYQMDVKSAFLNGLIEEEVYVRQ 1598
Score = 100 bits (248), Expect(3) = 2e-76
Identities = 48/76 (63%), Positives = 56/76 (73%), Gaps = 3/76 (3%)
Frame = +1
Query: 370 PGFEKP---NHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE P NHVFKL +ALYG KQAP AWYERL +LL +GF G VDKTLF + D
Sbjct: 1600 PGFENPKYPNHVFKLSKALYGLKQAPRAWYERLKSYLLSHGFEMGKVDKTLFIRRHGSDF 1659
Query: 541 LIVQVYVDDIIFGANN 588
L+VQ+YVDDIIFG ++
Sbjct: 1660 LLVQIYVDDIIFGGSS 1675
Score = 88.2 bits (217), Expect(3) = 2e-76
Identities = 42/75 (56%), Positives = 55/75 (73%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M EFE SM+GEL+FFLG QIKQT+EG + Q KY R+LLK++ MS KP TPM+++
Sbjct: 1685 VMSSEFEMSMMGELSFFLGFQIKQTREGTFLHQGKYTRDLLKRFDMSDGKPVSTPMASTA 1744
Query: 777 KLENDEKGEATNQKE 821
L+ DE GE +QKE
Sbjct: 1745 YLDPDEDGEPVDQKE 1759
>emb|CAN63212.1| hypothetical protein VITISV_002844 [Vitis vinifera]
Length = 900
Score = 167 bits (422), Expect(3) = 2e-76
Identities = 80/109 (73%), Positives = 95/109 (87%)
Frame = +2
Query: 41 EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGYNQEEEIDF 220
EELNQFE++ + +LVPRP+ QSVIGT+WVFRNK+DE G I+RNKARLVAQG+NQEE ID+
Sbjct: 3 EELNQFERSEVWELVPRPSNQSVIGTRWVFRNKMDENGIIVRNKARLVAQGFNQEEGIDY 62
Query: 221 DETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
+ETFAPVARLE+IRML AFAC+K L+QMDVKS FLNGF +EVYV Q
Sbjct: 63 EETFAPVARLEAIRMLLAFACFKDFVLYQMDVKSAFLNGFINEEVYVEQ 111
Score = 94.7 bits (234), Expect(3) = 2e-76
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = +3
Query: 600 MPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSEK 779
M EFE SM+GELNFFLGLQIKQ KEG I+QAKYIR+LLK++ M AK KTPMS+S K
Sbjct: 175 MHSEFEMSMMGELNFFLGLQIKQLKEGTFINQAKYIRDLLKRFNMEAAKTMKTPMSSSIK 234
Query: 780 LENDEKGE 803
L+ DEKG+
Sbjct: 235 LDKDEKGK 242
Score = 73.2 bits (178), Expect(3) = 2e-76
Identities = 36/54 (66%), Positives = 40/54 (74%), Gaps = 3/54 (5%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTK 522
PGF+ PNHVFKL +ALY KQAP AWYERLSKFLL+ GF G +D TLF K
Sbjct: 113 PGFQSFNFPNHVFKLKKALYRLKQAPRAWYERLSKFLLKKGFKMGKIDTTLFIK 166
>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
aspartic, catalytic [Medicago truncatula]
Length = 1715
Score = 157 bits (397), Expect(3) = 6e-76
Identities = 73/117 (62%), Positives = 99/117 (84%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
+ W++A+ EELNQF++N++ LVP+P+ +++IGTKWVFRNKL+EQG + RNKARLVAQGY
Sbjct: 1218 DGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGY 1277
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
+Q+E ID+ ETFAPVARLE+IR+L ++A G+ L+QMDVKS FLNG ++EVYV Q
Sbjct: 1278 SQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQ 1334
Score = 102 bits (254), Expect(3) = 6e-76
Identities = 49/78 (62%), Positives = 60/78 (76%), Gaps = 3/78 (3%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE P+HV+KL ++LYG KQAP AWY+RLS FL++N F RG VD TLF + +DI
Sbjct: 1336 PGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDI 1395
Query: 541 LIVQVYVDDIIFGANNIS 594
LIVQ+YVDDIIFG+ N S
Sbjct: 1396 LIVQIYVDDIIFGSTNAS 1413
Score = 73.6 bits (179), Expect(3) = 6e-76
Identities = 35/74 (47%), Positives = 48/74 (64%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M EFE SM+GEL FFLG+QI Q+KEG+ + Q KY +ELLKK+ + K TPM +
Sbjct: 1421 LMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTC 1480
Query: 777 KLENDEKGEATNQK 818
L ++ G +QK
Sbjct: 1481 TLSKEDTGTVVDQK 1494
>gb|EOY13955.1| Uncharacterized protein TCM_032871 [Theobroma cacao]
Length = 332
Score = 145 bits (366), Expect(3) = 2e-75
Identities = 69/113 (61%), Positives = 91/113 (80%)
Frame = +2
Query: 29 IAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGYNQEE 208
+A+ EEL+QF +N + LV RP+ +IGTKW+FRNK+DEQGN++RNKARLVA+GYNQEE
Sbjct: 1 MAMQEELDQFIRNQVWSLVLRPSNHLIIGTKWLFRNKVDEQGNVVRNKARLVAKGYNQEE 60
Query: 209 EIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
ID+DETFAPVAR+E+IR+L AFA + L+QMDVK LNG ++E++V Q
Sbjct: 61 GIDYDETFAPVARIEAIRLLLAFARFMNFKLYQMDVKCALLNGLIQEELFVQQ 113
Score = 108 bits (269), Expect(3) = 2e-75
Identities = 49/71 (69%), Positives = 59/71 (83%)
Frame = +1
Query: 376 FEKPNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDILIVQV 555
FEK +HVFKL +ALYG KQAP AWYERLSKFL+ENG+ RG +D TLF K + D+++VQ+
Sbjct: 120 FEKFDHVFKLHKALYGLKQAPRAWYERLSKFLIENGYDRGSIDTTLFIKRYLNDLIVVQI 179
Query: 556 YVDDIIFGANN 588
YVDDIIFGA N
Sbjct: 180 YVDDIIFGATN 190
Score = 78.2 bits (191), Expect(3) = 2e-75
Identities = 38/73 (52%), Positives = 54/73 (73%)
Frame = +3
Query: 600 MPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSEK 779
M GEF+ SM+GEL +FLGLQIKQ++E + I+Q +Y ++LKK+ + K + TPMS S K
Sbjct: 201 MQGEFKMSMMGELKYFLGLQIKQSEEEIFINQERYTYDMLKKFDVMKLKSNSTPMSPSTK 260
Query: 780 LENDEKGEATNQK 818
L+ DEKG+ +QK
Sbjct: 261 LDLDEKGKDVDQK 273
>gb|EOY19086.1| Cysteine-rich RLK (RECEPTOR-like protein kinase) 8, putative
[Theobroma cacao]
Length = 275
Score = 159 bits (401), Expect(3) = 2e-75
Identities = 74/109 (67%), Positives = 91/109 (83%)
Frame = +2
Query: 41 EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGYNQEEEIDF 220
EEL+QF++N + LV RP ++GTKWVFRNK+DEQGN++RNKARLVAQGYNQEE ID+
Sbjct: 3 EELDQFKRNCVWSLVSRPLNHPIVGTKWVFRNKVDEQGNVVRNKARLVAQGYNQEERIDY 62
Query: 221 DETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
ETFAPVAR+E+IR+L AFAC+ L+QMDVKS FLNGF ++EVYV Q
Sbjct: 63 VETFAPVARIEAIRLLLAFACFMNFKLYQMDVKSAFLNGFIQEEVYVEQ 111
Score = 96.3 bits (238), Expect(3) = 2e-75
Identities = 43/71 (60%), Positives = 54/71 (76%)
Frame = +1
Query: 376 FEKPNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDILIVQV 555
FEKP+HV KL +ALY KQAP AWYERLSKFL+E G+ RG +D TLF K + D+++ Q+
Sbjct: 118 FEKPDHVLKLHKALYELKQAPRAWYERLSKFLVEKGYVRGNIDTTLFIKKYLNDLIVFQI 177
Query: 556 YVDDIIFGANN 588
YVDDI+F N
Sbjct: 178 YVDDIVFCVTN 188
Score = 76.6 bits (187), Expect(3) = 2e-75
Identities = 37/68 (54%), Positives = 53/68 (77%)
Frame = +3
Query: 600 MPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSEK 779
M GEF+ SM+GEL +FLGLQIKQ+++G+ I+Q +YI+++LKK+ M KP T MS S K
Sbjct: 199 MQGEFDMSMMGELKYFLGLQIKQSEKGIFINQERYIQDMLKKFDMLKLKPICTLMSPSTK 258
Query: 780 LENDEKGE 803
L+ D+KG+
Sbjct: 259 LDADKKGK 266
>gb|AAN40025.1| putative gag-pol polyprotein [Zea mays]
Length = 1892
Score = 153 bits (386), Expect(3) = 1e-74
Identities = 76/116 (65%), Positives = 93/116 (80%)
Frame = +2
Query: 20 NWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGYN 199
+W++A+ EELN F +N + LVPRP Q+V+GTKWVFRNK DE G + RNKARLVA+GY+
Sbjct: 1394 DWVVAMQEELNNFTRNEVWHLVPRPN-QNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYS 1452
Query: 200 QEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
Q E +DFDET+APVARLESIR+L A+A Y G L+QMDVKS FLNG K+EVYV Q
Sbjct: 1453 QVEGLDFDETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQ 1508
Score = 95.1 bits (235), Expect(3) = 1e-74
Identities = 46/78 (58%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE PNHV++L +ALYG KQAP AWYE L FL+ NGF G D TLFTK D+
Sbjct: 1510 PGFEDSEYPNHVYRLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDL 1569
Query: 541 LIVQVYVDDIIFGANNIS 594
+ Q+YVDDIIFG+ N S
Sbjct: 1570 FVCQIYVDDIIFGSTNES 1587
Score = 80.9 bits (198), Expect(3) = 1e-74
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M +FE SM+GEL +FLG Q+KQ +EG ISQ KY +++L K+GM AKP KTPM T+
Sbjct: 1595 IMTQKFEMSMMGELKYFLGFQVKQLREGTFISQTKYTQDILAKFGMKDAKPIKTPMGTNG 1654
Query: 777 KLENDEKGEATNQK 818
L+ D G++ +QK
Sbjct: 1655 HLDLDTGGKSVDQK 1668
>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
Length = 1885
Score = 180 bits (456), Expect(3) = 3e-74
Identities = 86/117 (73%), Positives = 102/117 (87%)
Frame = +2
Query: 17 ENWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGY 196
ENWMIA+ +ELNQFE++ + +LVPRP+ QSVIGTKWVFRNK+DE G I+RNKARLVAQGY
Sbjct: 973 ENWMIAMQKELNQFERSEVWELVPRPSNQSVIGTKWVFRNKMDENGIIVRNKARLVAQGY 1032
Query: 197 NQEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
NQEE ID++ETFAPVARLE+IRML AFAC+K L+QMDVKS FLNGF +E+YV Q
Sbjct: 1033 NQEEGIDYEETFAPVARLEAIRMLLAFACFKDFILYQMDVKSAFLNGFINEEIYVEQ 1089
Score = 101 bits (251), Expect(3) = 3e-74
Identities = 50/78 (64%), Positives = 57/78 (73%), Gaps = 3/78 (3%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGF+ PNHVFKL +ALYG KQAP AWYERLSKFLL+ F G +D TLF K D+
Sbjct: 1091 PGFQSFNFPNHVFKLKKALYGLKQAPRAWYERLSKFLLKKSFKMGKIDTTLFIKTKENDM 1150
Query: 541 LIVQVYVDDIIFGANNIS 594
L+VQ+YVDDI FGA N S
Sbjct: 1151 LLVQIYVDDITFGATNDS 1168
Score = 46.2 bits (108), Expect(3) = 3e-74
Identities = 21/36 (58%), Positives = 29/36 (80%)
Frame = +3
Query: 699 KYIRELLKKYGMSGAKPSKTPMSTSEKLENDEKGEA 806
KYI++LLK++ M AK KTPMS+S KL+ DEKG++
Sbjct: 1180 KYIKDLLKRFNMGEAKVMKTPMSSSIKLDMDEKGKS 1215
>gb|AAP94599.1| putative copia-type pol polyprotein [Zea mays]
Length = 1760
Score = 150 bits (379), Expect(3) = 3e-74
Identities = 75/116 (64%), Positives = 92/116 (79%)
Frame = +2
Query: 20 NWMIAV*EELNQFEKNNI*KLVPRPTTQSVIGTKWVFRNKLDEQGNIIRNKARLVAQGYN 199
+W++A+ EELN F +N + LVPRP Q+V+GTKWVFRNK DE G + RNKARLVA+GY+
Sbjct: 1262 DWVVAMQEELNNFTRNEVWHLVPRPN-QNVVGTKWVFRNKQDEHGVVTRNKARLVAKGYS 1320
Query: 200 QEEEIDFDETFAPVARLESIRMLCAFACYKGLDLFQMDVKSVFLNGFFKKEVYV*Q 367
Q E +DF ET+APVARLESIR+L A+A Y G L+QMDVKS FLNG K+EVYV Q
Sbjct: 1321 QVEGLDFGETYAPVARLESIRILLAYATYHGFKLYQMDVKSAFLNGPIKEEVYVEQ 1376
Score = 96.3 bits (238), Expect(3) = 3e-74
Identities = 47/78 (60%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
Frame = +1
Query: 370 PGFEK---PNHVFKLVEALYGFKQAP*AWYERLSKFLLENGFSRGGVDKTLFTKAFSQDI 540
PGFE PNHV+KL +ALYG KQAP AWYE L FL+ NGF G D TLFTK D+
Sbjct: 1378 PGFEDSEYPNHVYKLSKALYGLKQAPRAWYECLRDFLIANGFKVGKADPTLFTKTLENDL 1437
Query: 541 LIVQVYVDDIIFGANNIS 594
+ Q+YVDDIIFG+ N S
Sbjct: 1438 FVCQIYVDDIIFGSTNES 1455
Score = 80.9 bits (198), Expect(3) = 3e-74
Identities = 38/74 (51%), Positives = 53/74 (71%)
Frame = +3
Query: 597 MMPGEFETSMIGELNFFLGLQIKQTKEGMDISQAKYIRELLKKYGMSGAKPSKTPMSTSE 776
+M +FE SM+GEL +FLG Q+KQ +EG ISQ KY +++L K+GM AKP KTPM T+
Sbjct: 1463 IMTQKFEMSMMGELKYFLGFQVKQLQEGTFISQTKYTQDILSKFGMKDAKPIKTPMGTNG 1522
Query: 777 KLENDEKGEATNQK 818
L+ D G++ +QK
Sbjct: 1523 HLDLDTGGKSVDQK 1536