BLASTX nr result

ID: Catharanthus22_contig00029385 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00029385
         (1178 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    96   4e-17
ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624...    82   4e-13
ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661...    81   7e-13
gb|AAT40486.1| putative polyprotein [Solanum demissum]                 79   3e-12
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]    77   1e-11
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]    77   1e-11
gb|AAT71979.1| At5g39185 [Arabidopsis thaliana]                        75   4e-11
ref|XP_004234727.1| PREDICTED: uncharacterized protein LOC101248...    73   3e-10
ref|XP_004243119.1| PREDICTED: uncharacterized protein LOC101247...    71   7e-10
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...    70   2e-09
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...    70   2e-09
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi...    69   3e-09
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    65   4e-08
ref|XP_006364813.1| PREDICTED: uncharacterized protein LOC102593...    65   7e-08
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t...    64   9e-08
gb|EOY13851.1| Uncharacterized protein TCM_032521 [Theobroma cacao]    64   1e-07
ref|XP_004252487.1| PREDICTED: uncharacterized protein LOC101249...    63   3e-07
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]    62   3e-07
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    62   5e-07
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...    62   6e-07

>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 95.5 bits (236), Expect = 4e-17
 Identities = 47/104 (45%), Positives = 66/104 (63%), Gaps = 8/104 (7%)
 Frame = -2

Query: 1168 IIK*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDT 989
            I+K RE++K HQFL+GLDD+ +GTVR +IL +DP+P + K YAM+ +EE HR + R  D 
Sbjct: 65   IVKSREDEKAHQFLMGLDDTTFGTVRSSILALDPLPTLGKIYAMVTQEERHRSMARGADR 124

Query: 988  GSETVVFA--------TPKSIQFTHCLKPGHEIKNYYLLVGFPN 881
               TV  A        T KS   THC K GH++ + + L G+P+
Sbjct: 125  AEITVFAAXTEKPGGQTNKSGSCTHCGKTGHDVADCFQLKGYPD 168



 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 28/80 (35%), Positives = 40/80 (50%)
 Frame = -2

Query: 478 IPRLSPTQWDKFLELLNSPTSSLDVDTLSGKIKGKRILDSGYSHHMTSKRAYLSHILPSH 299
           IP L+   + K + LL + +S+ +  T   KI  + ILDSG S HMT +R     +    
Sbjct: 225 IPGLNDDNFQKLMALLRNGSSNAEKLTGKNKIVEEWILDSGASMHMTGRRDLFDWLRKWE 284

Query: 298 PYTVTLPNGSKTTGM*TGTV 239
              V LP+G+KT     G V
Sbjct: 285 TACVGLPDGTKTVANEMGYV 304



 Score = 36.2 bits (82), Expect(2) = 3e-06
 Identities = 14/35 (40%), Positives = 23/35 (65%)
 Frame = -3

Query: 138 VIIINNFVLMLQDRTMGMPIGAGGDRDGVYYFRPI 34
           ++   +   ++QDRT   PIG G  R+GVYY++P+
Sbjct: 338 IVTFTDSFCVIQDRTSRNPIGVGKLRNGVYYYKPL 372


>ref|XP_006480040.1| PREDICTED: uncharacterized protein LOC102624694 isoform X1 [Citrus
            sinensis] gi|568852764|ref|XP_006480041.1| PREDICTED:
            uncharacterized protein LOC102624694 isoform X2 [Citrus
            sinensis] gi|568852766|ref|XP_006480042.1| PREDICTED:
            uncharacterized protein LOC102624694 isoform X3 [Citrus
            sinensis]
          Length = 320

 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 39/102 (38%), Positives = 61/102 (59%), Gaps = 12/102 (11%)
 Frame = -2

Query: 1153 EEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGSETV 974
            EE+++HQFL+GLDD+IYG+VR NIL  DP+P + + Y+++V+EE  + + R  +   E V
Sbjct: 119  EEERLHQFLMGLDDTIYGSVRSNILSTDPLPPLNRAYSLVVQEERVQTITRGKEGRGEPV 178

Query: 973  VFAT------------PKSIQFTHCLKPGHEIKNYYLLVGFP 884
             FA               S+   HC K GH+  + + L+G+P
Sbjct: 179  AFAVQGGVKGQIEIREKSSVICKHCRKTGHDADSCFQLIGYP 220


>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
          Length = 516

 Score = 81.3 bits (199), Expect = 7e-13
 Identities = 40/108 (37%), Positives = 63/108 (58%), Gaps = 14/108 (12%)
 Frame = -2

Query: 1162 K*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGS 983
            K REE+K+HQFL+GLDD+ + TVR N+L +DP+PN+ + Y M+V+EE    + R  +   
Sbjct: 193  KKREEEKLHQFLMGLDDTQFRTVRSNVLSLDPLPNLNRAYQMVVQEERVGVMTRGKEERG 252

Query: 982  ETVVFA--------------TPKSIQFTHCLKPGHEIKNYYLLVGFPN 881
            + + FA              T      +HC + GH+I + + LVG+P+
Sbjct: 253  DPIAFAVKSGRTSSWEKKPNTGSEKPCSHCKRDGHDIDSCFQLVGYPD 300


>gb|AAT40486.1| putative polyprotein [Solanum demissum]
          Length = 1065

 Score = 79.3 bits (194), Expect = 3e-12
 Identities = 42/108 (38%), Positives = 61/108 (56%), Gaps = 17/108 (15%)
 Frame = -2

Query: 1156 REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGSET 977
            RE++KVHQF +GLDD ++GT   NIL   P+P + + YAMI++EE H+ L R  +  S+ 
Sbjct: 134  REKEKVHQFSMGLDDKVFGTTHSNILSTKPLPTLNRVYAMIIQEERHQNLARAKEDRSDV 193

Query: 976  VVFA-----TPKSIQFT------------HCLKPGHEIKNYYLLVGFP 884
            V FA     T ++   T             C K  +E K Y+LL+G+P
Sbjct: 194  VAFAVHSLSTARNNYSTIPSNDLDKPPCAKCGKFNYETKKYFLLIGYP 241


>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
          Length = 1149

 Score = 77.4 bits (189), Expect = 1e-11
 Identities = 37/104 (35%), Positives = 61/104 (58%), Gaps = 12/104 (11%)
 Frame = -2

Query: 1162 K*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGS 983
            K REE++VHQFL+GLD+  YGTV  NIL  +P+PN+ + YAM+V++E  R + R  +   
Sbjct: 146  KKREEERVHQFLMGLDEEGYGTVSSNILSTEPLPNLNRVYAMVVQQERMRTMTRTKEERG 205

Query: 982  ETVVFA------------TPKSIQFTHCLKPGHEIKNYYLLVGF 887
              + FA              +++  T+C + GH++   + L+G+
Sbjct: 206  NLMSFAMKVGGQNSRGEXKDRNVVCTNCKREGHDVDTCFQLIGY 249


>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
          Length = 1157

 Score = 77.0 bits (188), Expect = 1e-11
 Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 12/108 (11%)
 Frame = -2

Query: 1171 EIIK*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNID 992
            ++ K REE++VHQFL+GLD+  YGTVR NIL ++P+ N+ + YAMIV++E  R + R  +
Sbjct: 131  QLEKKREEERVHQFLMGLDEDGYGTVRSNILSIEPLSNLNRVYAMIVQQERVRTMTRTKE 190

Query: 991  TGSETVVFAT------------PKSIQFTHCLKPGHEIKNYYLLVGFP 884
                 + FA              K++  ++C + GHE+ + +  + +P
Sbjct: 191  ERGSPMSFAVQVGGRNPGGDGKDKTVICSNCKRKGHEVDSCFQRIAYP 238


>gb|AAT71979.1| At5g39185 [Arabidopsis thaliana]
          Length = 348

 Score = 75.5 bits (184), Expect = 4e-11
 Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 13/111 (11%)
 Frame = -2

Query: 1177 INEIIK*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRN 998
            + E+ K REEDK+HQFL+GLD+S+YG V+  +L   P+P++++ Y  + ++E  + L R 
Sbjct: 171  MEEVRKEREEDKLHQFLMGLDESMYGAVKSALLSRVPLPSLEEAYNTLTQDEESKSLSRL 230

Query: 997  IDTGSETVVFA---TPKSIQFT----------HCLKPGHEIKNYYLLVGFP 884
             D  ++ V FA   TP++   T          HC + GH  +N + LVG+P
Sbjct: 231  HDERNDGVSFAVQTTPRTRSLTKNKDSAIVCSHCGRLGHLAENCFKLVGYP 281


>ref|XP_004234727.1| PREDICTED: uncharacterized protein LOC101248080 [Solanum
            lycopersicum]
          Length = 422

 Score = 72.8 bits (177), Expect = 3e-10
 Identities = 34/97 (35%), Positives = 57/97 (58%), Gaps = 6/97 (6%)
 Frame = -2

Query: 1153 EEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGSETV 974
            EE+++H FL+ L+D+ + + R  I    P+P + + Y ++ +EE H+ +VRN D  ++ +
Sbjct: 128  EEEQMHAFLLELNDAQFVSTRSQIFGTHPLPVLNEAYYLVSQEERHKSIVRNRDDQTDGL 187

Query: 973  VFAT------PKSIQFTHCLKPGHEIKNYYLLVGFPN 881
             F        P   +FTHC K GH  +  +LL+GFPN
Sbjct: 188  AFTVETQPKPPLKYKFTHCGKNGHSNERCFLLIGFPN 224


>ref|XP_004243119.1| PREDICTED: uncharacterized protein LOC101247933 [Solanum
            lycopersicum]
          Length = 528

 Score = 71.2 bits (173), Expect = 7e-10
 Identities = 34/97 (35%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
 Frame = -2

Query: 1153 EEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGSETV 974
            EE+K H FL+GLDD+ +G  R  I    P+  + + Y ++ +EE H+ +V N D  ++ +
Sbjct: 189  EEEKTHAFLLGLDDAQFGATRSEIFGTHPLFVLNEAYYLVSQEERHKSIVCNRDDHTDGL 248

Query: 973  VFAT------PKSIQFTHCLKPGHEIKNYYLLVGFPN 881
             FA       P   + THC K GH  +  ++L+GFP+
Sbjct: 249  AFAVETQPTPPLKYKCTHCGKNGHSAERCFILIGFPS 285


>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 19/113 (16%)
 Frame = -2

Query: 1162 K*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGS 983
            K REE+K+HQF++GLDDS +G +   ++ MDP P++ + Y+ +V+EE     V+  +   
Sbjct: 189  KEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQ 248

Query: 982  ETVVFAT-------------------PKSIQFTHCLKPGHEIKNYYLLVGFPN 881
              + F T                    +S+  +HC + GHE K+ + +VGFP+
Sbjct: 249  SAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPD 301


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score = 69.7 bits (169), Expect = 2e-09
 Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 19/113 (16%)
 Frame = -2

Query: 1162 K*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGS 983
            K REE+K+HQF++GLDDS +G +   ++ MDP P++ + Y+ +V+EE     V+  +   
Sbjct: 189  KEREEEKIHQFVLGLDDSRFGGLSATLIAMDPFPSLGEIYSRVVREEQRLASVQIREQQQ 248

Query: 982  ETVVFAT-------------------PKSIQFTHCLKPGHEIKNYYLLVGFPN 881
              + F T                    +S+  +HC + GHE K+ + +VGFP+
Sbjct: 249  SAIGFLTRQSEVTADGRTDSSIIKSRDRSVLCSHCGRSGHEKKDCWQIVGFPD 301


>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1496

 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 38/120 (31%), Positives = 68/120 (56%), Gaps = 11/120 (9%)
 Frame = -2

Query: 1174 NEIIK*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNI 995
            ++I K RE+D+VH+FL+GLD S + ++R +I  ++P+P++ + Y+ +V+EE +    R  
Sbjct: 174  SDIEKEREDDRVHKFLLGLD-SRFSSIRSSITDIEPLPDLYQVYSRVVREEQNLNASRTK 232

Query: 994  DT-----------GSETVVFATPKSIQFTHCLKPGHEIKNYYLLVGFPNRPPEYRWVDQN 848
            D             S T  F    ++  THC + GHE+   +L+ G+P+      W++QN
Sbjct: 233  DVVKTEAIGFSVQSSTTPRFRDKSTLFCTHCNRKGHEVTQCFLVHGYPD-----WWLEQN 287


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 65.5 bits (158), Expect = 4e-08
 Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
 Frame = -2

Query: 1177 INEIIK*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRN 998
            ++++ K REEDK+HQFL+GLD+S+YG V+  +L   P+P++++ Y  + ++E  + L R 
Sbjct: 172  MDDVRKEREEDKLHQFLMGLDESVYGAVKSALLSRVPLPSLEEAYNALTQDEESKSLSRL 231

Query: 997  IDTGSETVVFATPKSIQ---------FTHCLKPGHEIKNYYLLVGFP 884
             +   + V FA   + +          ++C + GH  +  + L+G+P
Sbjct: 232  HNERVDGVSFAVQTTSRPRDSSENRVCSNCGRVGHLAEQCFKLIGYP 278



 Score = 45.1 bits (105), Expect(2) = 8e-07
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
 Frame = -2

Query: 484 VGIPRLSPTQWDKFLELLNSPTSSLDVDTLSGK-IKGKRILDSGYSHHMTSKRAYLSHIL 308
           +G+  L+ +QW K L+ +     S   D  SGK      I+DSG ++HMT   A+L ++ 
Sbjct: 341 IGLSGLNDSQW-KILQTILEERKSTSNDHQSGKYFLESWIIDSGATNHMTGSLAFLRNVC 399

Query: 307 PSHPYTVTLPNGSKTTGM*TGTV 239
              P  + LP+G  TT    G+V
Sbjct: 400 DMPPVLIKLPDGRFTTATKQGSV 422



 Score = 35.8 bits (81), Expect(2) = 8e-07
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = -3

Query: 234 LDSAFQITDVLHIXXXXXXXXXXXXXXXXXXCVIIINNFVLMLQDRTMGMPIGAGGDRDG 55
           L S+  + DVL +                  C+  I + V ++QDRT  M IGAG + +G
Sbjct: 424 LGSSLDLQDVLFVDGLHCHLISVSQLTRTRRCIFQITDKVCIVQDRTTLMLIGAGRELNG 483

Query: 54  VYYFRPIPVLTGV 16
           +Y+FR +     V
Sbjct: 484 LYFFRGVETAAAV 496


>ref|XP_006364813.1| PREDICTED: uncharacterized protein LOC102593226 [Solanum tuberosum]
          Length = 384

 Score = 64.7 bits (156), Expect = 7e-08
 Identities = 32/112 (28%), Positives = 64/112 (57%), Gaps = 18/112 (16%)
 Frame = -2

Query: 1165 IK*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRN---- 998
            +K  +++++ QFL+GL+DS YG++R NI+ + P+P++   Y++++++E  +++  N    
Sbjct: 187  LKSLQDERLIQFLMGLNDS-YGSIRSNIIMISPLPSVNLAYSLLIQDEKQKEIYHNPQSP 245

Query: 997  -------------IDTGSETVVFATPK-SIQFTHCLKPGHEIKNYYLLVGFP 884
                         + T S++  +   K ++   HC KPGH I   Y ++GFP
Sbjct: 246  ADLSSYSAVQQPILGTKSQSYEYKGKKNNLVCPHCKKPGHSIDKCYRIIGFP 297


>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 370

 Score = 64.3 bits (155), Expect = 9e-08
 Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
 Frame = -2

Query: 1177 INEIIK*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRN 998
            +  I+K R+++K+HQF++GLD + +  +  N++ MDP+P++   Y+ +++EE      R 
Sbjct: 183  LTAIVKERDDEKLHQFVLGLDSARFSGLCTNLINMDPLPSLGVAYSQVIREEQRIHASRT 242

Query: 997  IDTGSETVVFAT----------------------PKSIQFTHCLKPGHEIKNYYLLVGFP 884
             +   E V F                         + +  +HC + GHE K+ + +VGFP
Sbjct: 243  QEQRQEVVGFVARHEQSSAMSSPAQSSIESSIVKSRPVLCSHCGRTGHEKKDCWSIVGFP 302

Query: 883  NRPPEYRWVDQN 848
            +      W ++N
Sbjct: 303  D-----WWTERN 309


>gb|EOY13851.1| Uncharacterized protein TCM_032521 [Theobroma cacao]
          Length = 321

 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
 Frame = -2

Query: 1150 EDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGSETVV 971
            +D V +FL GL+DS + TV   I+ MDPIP++ K Y+++++EEA R L+     G E+  
Sbjct: 135  KDIVFRFLNGLNDS-FSTVGSQIILMDPIPSLDKVYSLVLREEAQRNLLFQAQPGLESST 193

Query: 970  FAT--------PKSIQFTHCLKPGHEIKNYYLLVGFP 884
              T         K +  +HC K  H  K  Y LVGFP
Sbjct: 194  MLTASDGKKKFKKDLVCSHCGKKVHLKKKCYRLVGFP 230


>ref|XP_004252487.1| PREDICTED: uncharacterized protein LOC101249998 [Solanum
            lycopersicum]
          Length = 836

 Score = 62.8 bits (151), Expect = 3e-07
 Identities = 32/97 (32%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = -2

Query: 1171 EIIK*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNID 992
            E ++  +  ++ QFL+GL+D  Y + R  IL M  +PN+ + YA+++++E+ R +  NI 
Sbjct: 164  EYVEQLQYQRLLQFLMGLNDR-YSSARGQILMMHNLPNVNQAYALVIQDESQRVIAGNIS 222

Query: 991  TGSETVVFATPKSI-QFTHCLKPGHEIKNYYLLVGFP 884
             G E++  A    + +  +C   GH   N YLL+G+P
Sbjct: 223  EGIESLAMANCNKLKKCDNCHATGHVKDNCYLLIGYP 259


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 28/50 (56%), Positives = 39/50 (78%)
 Frame = -2

Query: 1171 EIIK*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEE 1022
            ++ K RE ++VHQFLIGLD++ YGTV  NIL  +P+PN+   YAMIV++E
Sbjct: 78   QLEKKREXERVHQFLIGLDENGYGTVXSNILSXEPLPNLNXVYAMIVQQE 127


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 62.0 bits (149), Expect = 5e-07
 Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 6/87 (6%)
 Frame = -2

Query: 1156 REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRNIDTGSET 977
            REED++ QFL+GL++S Y  VR NIL M P+PN+++ Y++IV+EE  R+ V +  T + +
Sbjct: 462  REEDRLMQFLMGLNES-YKAVRSNILMMSPLPNVRQAYSLIVQEEMQRQ-VSSEPTENFS 519

Query: 976  VVFA------TPKSIQFTHCLKPGHEI 914
            +  A       P+     HC + GH I
Sbjct: 520  IAAAVPGKGGNPRQKMCDHCNRSGHTI 546


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score = 61.6 bits (148), Expect = 6e-07
 Identities = 37/111 (33%), Positives = 60/111 (54%), Gaps = 18/111 (16%)
 Frame = -2

Query: 1162 K*REEDKVHQFLIGLDDSIYGTVRLNILQMDPIPNIKKTYAMIVKEEAHRKLVRN----I 995
            K REEDKVH+FL GLDD+++ TVR +++   P+  +++ Y ++ +EE    L+RN    +
Sbjct: 90   KDREEDKVHEFLSGLDDALFRTVRSSLVSRIPVQPLEEVYNIVRQEE---DLLRNGANVL 146

Query: 994  DTGSETVVFAT--------------PKSIQFTHCLKPGHEIKNYYLLVGFP 884
            D   E   FA                KS+   HC + GH  ++ Y ++G+P
Sbjct: 147  DDQREVNAFAAQMRPKLYQGRGDEKDKSMVCKHCNRSGHASESCYAVIGYP 197


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