BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00029322
         (862 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]          59   2e-06
ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein A...    58   5e-06

>gb|ADK92871.1| retrotransposon protein [Hypericum perforatum]
          Length = 593

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 4/84 (4%)
 Frame = -3

Query: 257 SGKKFSPKAWVQLCKPKESGGLGFRRARDFNKALVAELS*IYVTDPSKIRIELVKSKYLR 78
           +G K   ++W +LC+ K +GGLGFRR ++FN+A++A+     +T P+ +   ++++KY  
Sbjct: 72  NGSKMHWRSWEKLCRSKRNGGLGFRRLKNFNRAMLAKQGWRLLTLPNSLAATILRAKYYP 131

Query: 77  GKQILDVEKCP----SWASWLRNS 18
            K  L++   P    +W S L+ S
Sbjct: 132 RKSPLEISSSPYSSYTWRSILKGS 155


>ref|XP_004306275.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
           vesca subsp. vesca]
          Length = 727

 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
 Frame = -3

Query: 248 KFSPKAWVQLCKPKESGGLGFRRARDFNKALVAELS*IYVTDPSKIRIELVKSKYLRGKQ 69
           K  P AW Q+C PK  GGLG R +  FNKA VA+L    + D S   +++VK+KYL+   
Sbjct: 262 KNPPVAWEQVCTPKSIGGLGIRPSAYFNKAAVAKLGWKIIMDHSNWWVQIVKNKYLKNHS 321

Query: 68  ILDVEKCPS----WASWL--RNSIREGM 3
             + +K  S    W   L  R+ I +GM
Sbjct: 322 FFETKKKSSDSVAWKGILDSRDLITKGM 349