BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00029275
         (433 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mit...   185   4e-52
ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mit...   181   4e-51
gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus...   179   2e-50
emb|CBI18448.3| unnamed protein product [Vitis vinifera]              178   1e-49
ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   180   2e-49
ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   178   2e-49
ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   180   2e-49
ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   175   3e-49
gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma ...   174   3e-49
ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [...   176   3e-49
ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citr...   176   1e-47
ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Popu...   175   2e-47
ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   177   2e-47
ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   177   2e-47
gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]           169   7e-47
gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]           169   7e-47
ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mit...   174   9e-47
ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitoc...   172   3e-46
ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thalian...   168   1e-45
ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arab...   166   4e-45

>ref|XP_006601250.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Glycine max]
          Length = 476

 Score =  185 bits (469), Expect(2) = 4e-52
 Identities = 88/117 (75%), Positives = 102/117 (87%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPPKLPVKG++P+HNSMD      LSYDYDEGPKLVHRLDRESSG+LL+GR
Sbjct: 183 KDSAIIVLNKPPKLPVKGSLPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLLGR 242

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T +S+S+L  LFSNIN AKS  KDW+ ACEATYQ+YWALVIG PKEKEG+I APLSK
Sbjct: 243 TKDSVSHLQWLFSNINNAKSSCKDWNEACEATYQRYWALVIGTPKEKEGIIHAPLSK 299



 Score = 45.8 bits (107), Expect(2) = 4e-52
 Identities = 20/28 (71%), Positives = 26/28 (92%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +I+ NEVMKRGAR++VPVS+ ET+ISKR
Sbjct: 130 KIRPNEVMKRGARVHVPVSICETRISKR 157


>ref|XP_006353749.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like isoform
           X1 [Solanum tuberosum] gi|565374397|ref|XP_006353750.1|
           PREDICTED: RNA pseudouridine synthase 3,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565374399|ref|XP_006353751.1| PREDICTED: RNA
           pseudouridine synthase 3, mitochondrial-like isoform X3
           [Solanum tuberosum]
          Length = 475

 Score =  181 bits (459), Expect(2) = 4e-51
 Identities = 86/119 (72%), Positives = 102/119 (85%)
 Frame = -1

Query: 358 FQEDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLM 179
           F +D +I++LNKPPKLP+KGN+P+HNSMD      LSY+YDEGP+LVHRLDRESSGL LM
Sbjct: 181 FYKDPAILVLNKPPKLPLKGNLPVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLM 240

Query: 178 GRTAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           GRT ESIS+LHLLFSN  K+KSLSK W+ AC +TYQ+YWALVIG PKEKEG+I APL+K
Sbjct: 241 GRTEESISHLHLLFSNTKKSKSLSKAWNDACGSTYQRYWALVIGSPKEKEGVISAPLTK 299



 Score = 46.2 bits (108), Expect(2) = 4e-51
 Identities = 21/28 (75%), Positives = 27/28 (96%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IKH+EVM+ GARI+VP+SVAET+ISKR
Sbjct: 130 KIKHSEVMEVGARIHVPISVAETRISKR 157


>gb|ESW32964.1| hypothetical protein PHAVU_001G032500g [Phaseolus vulgaris]
          Length = 480

 Score =  179 bits (455), Expect(2) = 2e-50
 Identities = 86/117 (73%), Positives = 100/117 (85%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPPKLPVKGN+P+HNSMD      LSYDYDEGPKLVHRLDRE+SG+LL+GR
Sbjct: 187 KDSAIIVLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDEGPKLVHRLDRETSGILLLGR 246

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T +S S+L  LF+NIN AKS  K W+ ACEATYQ+YWALVIG PKEKEG+I APLSK
Sbjct: 247 TKDSASHLQWLFTNINNAKSSCKAWNDACEATYQRYWALVIGTPKEKEGIIHAPLSK 303



 Score = 45.1 bits (105), Expect(2) = 2e-50
 Identities = 19/28 (67%), Positives = 26/28 (92%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +I+ NEVMK GAR++VPVS+AET++SKR
Sbjct: 134 KIRPNEVMKHGARVHVPVSIAETRVSKR 161


>emb|CBI18448.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score =  178 bits (452), Expect(2) = 1e-49
 Identities = 84/117 (71%), Positives = 102/117 (87%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +D +I++LNKPPK+P+KGN+P+HNSMD      L++DY+EGPKLVHRLDRESSGLLLMGR
Sbjct: 186 QDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGR 245

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T ES+++LH LFS+INKAKSLSK W  ACEAT Q+YWALVIG PK+KEG+I APLSK
Sbjct: 246 TKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSK 302



 Score = 43.9 bits (102), Expect(2) = 1e-49
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IK NEVM+ G RIYVPVSVAE +ISKR
Sbjct: 131 KIKPNEVMEAGTRIYVPVSVAEARISKR 158


>ref|XP_004515176.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
           X1 [Cicer arietinum]
          Length = 479

 Score =  180 bits (456), Expect(2) = 2e-49
 Identities = 85/117 (72%), Positives = 100/117 (85%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPPKLPVKGN+P+HNSMD      LSYDYD+GPKLVHRLDRESSG+LL+GR
Sbjct: 186 KDSAIIMLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLLGR 245

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T +S+S+L  LFSNIN  KS  K W+ ACE+TYQ+YWALVIG PKEKEG+I APLSK
Sbjct: 246 TKDSVSHLQWLFSNINNTKSSCKAWNDACESTYQRYWALVIGTPKEKEGIIHAPLSK 302



 Score = 42.0 bits (97), Expect(2) = 2e-49
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +I+ NEVMK GAR++V VS+AETKISKR
Sbjct: 133 KIRPNEVMKPGARVHVSVSMAETKISKR 160


>ref|XP_002267010.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Vitis
           vinifera]
          Length = 479

 Score =  178 bits (451), Expect(2) = 2e-49
 Identities = 84/117 (71%), Positives = 102/117 (87%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +D +I++LNKPPK+P+KGN+P+HNSMD      L++DY+EGPKLVHRLDRESSGLLLMGR
Sbjct: 184 KDPAILVLNKPPKVPLKGNLPVHNSMDALAAAALTFDYEEGPKLVHRLDRESSGLLLMGR 243

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T ES+++LH LFS+INKAKSLSK W  ACEAT Q+YWALVIG PK+KEG+I APLSK
Sbjct: 244 TKESVAHLHWLFSDINKAKSLSKAWDDACEATCQRYWALVIGSPKQKEGVIHAPLSK 300



 Score = 43.9 bits (102), Expect(2) = 2e-49
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IK NEVM+ G RIYVPVSVAE +ISKR
Sbjct: 131 KIKPNEVMEAGTRIYVPVSVAEARISKR 158


>ref|XP_004515177.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like isoform
           X2 [Cicer arietinum]
          Length = 360

 Score =  180 bits (456), Expect(2) = 2e-49
 Identities = 85/117 (72%), Positives = 100/117 (85%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPPKLPVKGN+P+HNSMD      LSYDYD+GPKLVHRLDRESSG+LL+GR
Sbjct: 186 KDSAIIMLNKPPKLPVKGNLPVHNSMDALAAAALSYDYDDGPKLVHRLDRESSGILLLGR 245

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T +S+S+L  LFSNIN  KS  K W+ ACE+TYQ+YWALVIG PKEKEG+I APLSK
Sbjct: 246 TKDSVSHLQWLFSNINNTKSSCKAWNDACESTYQRYWALVIGTPKEKEGIIHAPLSK 302



 Score = 42.0 bits (97), Expect(2) = 2e-49
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +I+ NEVMK GAR++V VS+AETKISKR
Sbjct: 133 KIRPNEVMKPGARVHVSVSMAETKISKR 160


>ref|XP_004243668.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Solanum
           lycopersicum]
          Length = 475

 Score =  175 bits (443), Expect(2) = 3e-49
 Identities = 84/119 (70%), Positives = 100/119 (84%)
 Frame = -1

Query: 358 FQEDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLM 179
           F +D +I++LNKPPKLPVKGN+ +HNSMD      LSY+YDEGP+LVHRLDRESSGL LM
Sbjct: 181 FYKDPAILVLNKPPKLPVKGNLHVHNSMDALAAAALSYEYDEGPRLVHRLDRESSGLHLM 240

Query: 178 GRTAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           GRT ESIS+LHLLFSN  ++KSLSK W+ AC +TYQ+YWALVIG PK KEG+I APL+K
Sbjct: 241 GRTEESISHLHLLFSNTKRSKSLSKAWNDACGSTYQRYWALVIGSPKVKEGVISAPLTK 299



 Score = 46.2 bits (108), Expect(2) = 3e-49
 Identities = 21/28 (75%), Positives = 27/28 (96%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IKH+EVM+ GARI+VP+SVAET+ISKR
Sbjct: 130 KIKHSEVMEVGARIHVPISVAETRISKR 157


>gb|EOY26277.1| Pseudouridine synthase family protein [Theobroma cacao]
          Length = 471

 Score =  174 bits (442), Expect(2) = 3e-49
 Identities = 81/117 (69%), Positives = 99/117 (84%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +D +I++LNKPPKLPVKG++P+HNSMD      LSYD+DEGPKLVHRLDRESSGLLLMGR
Sbjct: 178 KDYAILVLNKPPKLPVKGSLPVHNSMDALAAAALSYDHDEGPKLVHRLDRESSGLLLMGR 237

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T ES+++LH LF+++N  KS  K W+ AC+  YQ++WALVIG PKEKEGLICAPLSK
Sbjct: 238 TKESVAHLHWLFNDLNTVKSSCKAWNDACDVKYQRFWALVIGTPKEKEGLICAPLSK 294



 Score = 46.2 bits (108), Expect(2) = 3e-49
 Identities = 20/28 (71%), Positives = 26/28 (92%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IKHNEVM+ G R++VPVS+AET+ISKR
Sbjct: 125 KIKHNEVMEVGTRVWVPVSIAETRISKR 152


>ref|XP_002526838.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223533842|gb|EEF35573.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 468

 Score =  176 bits (447), Expect(2) = 3e-49
 Identities = 86/117 (73%), Positives = 99/117 (84%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPP+LPVKGN+P+HNSMD      LSYDYDEGPKLV RLDRESSGLLLMGR
Sbjct: 175 KDSAIIVLNKPPRLPVKGNLPLHNSMDALAAAALSYDYDEGPKLVQRLDRESSGLLLMGR 234

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T ESI +L  LFS++NK+ S  K W+ AC+ATYQ+YWALVIG PKEKEGLI APLSK
Sbjct: 235 TKESIDHLQWLFSDVNKSNSRCKAWNDACKATYQRYWALVIGSPKEKEGLIRAPLSK 291



 Score = 44.3 bits (103), Expect(2) = 3e-49
 Identities = 19/28 (67%), Positives = 26/28 (92%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IKHN++M+ GAR++V VSVAET+ISKR
Sbjct: 122 KIKHNDIMEAGARVHVAVSVAETRISKR 149


>ref|XP_006436406.1| hypothetical protein CICLE_v10031422mg [Citrus clementina]
           gi|557538602|gb|ESR49646.1| hypothetical protein
           CICLE_v10031422mg [Citrus clementina]
          Length = 471

 Score =  176 bits (447), Expect(2) = 1e-47
 Identities = 84/116 (72%), Positives = 101/116 (87%)
 Frame = -1

Query: 349 DSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 170
           DS+I++LNKPPK+P+KG++P+HNSMD      LSYDY+EGPKLVHRLDRESSGLLLMGRT
Sbjct: 176 DSAILVLNKPPKVPLKGHLPVHNSMDALAAAALSYDYNEGPKLVHRLDRESSGLLLMGRT 235

Query: 169 AESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
            ES+S L  LFS++NK+KSLSK W+ ACEA YQ+YWALVIG PKEK+G+I APLSK
Sbjct: 236 KESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPKEKQGIIHAPLSK 291



 Score = 38.9 bits (89), Expect(2) = 1e-47
 Identities = 18/28 (64%), Positives = 24/28 (85%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IK NEVM+ GARI++PVS+ E +ISKR
Sbjct: 122 KIKTNEVMEPGARIFLPVSMVEGRISKR 149


>ref|XP_006385075.1| hypothetical protein POPTR_0004s23670g [Populus trichocarpa]
           gi|550341843|gb|ERP62872.1| hypothetical protein
           POPTR_0004s23670g [Populus trichocarpa]
          Length = 462

 Score =  175 bits (443), Expect(2) = 2e-47
 Identities = 86/117 (73%), Positives = 99/117 (84%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS++++LNKPPK+PVKGN+PIHNSMD      LSY YDEGPKLVHRLDRESSGLLLMGR
Sbjct: 169 KDSALLVLNKPPKVPVKGNMPIHNSMDALAAAALSYGYDEGPKLVHRLDRESSGLLLMGR 228

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T ESI++L LLFS INKA+S    W+ ACEATYQ+YWALVIG PK+KEGLI A LSK
Sbjct: 229 TKESIAHLQLLFSYINKAQSKCHAWNDACEATYQRYWALVIGSPKDKEGLISARLSK 285



 Score = 40.0 bits (92), Expect(2) = 2e-47
 Identities = 19/28 (67%), Positives = 25/28 (89%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IK ++VM+ GARI++PVSVAET ISKR
Sbjct: 116 KIKPSDVMEVGARIHIPVSVAETAISKR 143


>ref|XP_004158518.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  177 bits (450), Expect(2) = 2e-47
 Identities = 84/117 (71%), Positives = 96/117 (82%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPPKLPVKG +P+HNSMD      LSYDYD+GPKLVHRLDRESSG+LLMGR
Sbjct: 179 KDSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGR 238

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T ES+ +L  LFSNI  AK   K W  AC ATYQKYWALVIGCP+E+EG+I APLSK
Sbjct: 239 TKESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSK 295



 Score = 37.0 bits (84), Expect(2) = 2e-47
 Identities = 15/28 (53%), Positives = 24/28 (85%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +I+  E+M+ GARI++PVSVAE K+++R
Sbjct: 126 KIRSGEIMETGARIHLPVSVAEMKVARR 153


>ref|XP_004138653.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Cucumis
           sativus]
          Length = 471

 Score =  177 bits (450), Expect(2) = 2e-47
 Identities = 84/117 (71%), Positives = 96/117 (82%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPPKLPVKG +P+HNSMD      LSYDYD+GPKLVHRLDRESSG+LLMGR
Sbjct: 179 KDSAIIVLNKPPKLPVKGTLPVHNSMDALADAALSYDYDDGPKLVHRLDRESSGILLMGR 238

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T ES+ +L  LFSNI  AK   K W  AC ATYQKYWALVIGCP+E+EG+I APLSK
Sbjct: 239 TKESVDHLQWLFSNIRNAKFTCKAWEEACNATYQKYWALVIGCPREREGVISAPLSK 295



 Score = 37.0 bits (84), Expect(2) = 2e-47
 Identities = 15/28 (53%), Positives = 24/28 (85%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +I+  E+M+ GARI++PVSVAE K+++R
Sbjct: 126 KIRSGEIMETGARIHLPVSVAEMKVARR 153


>gb|EXC58952.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  169 bits (429), Expect(2) = 7e-47
 Identities = 84/116 (72%), Positives = 95/116 (81%)
 Frame = -1

Query: 349 DSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 170
           DS+I++LNKPP+LPVKG++P+HNSMD      LSYDY EGPKLVHRLDR+SSGLLLMGRT
Sbjct: 164 DSAILVLNKPPRLPVKGHLPVHNSMDALAAAALSYDYSEGPKLVHRLDRDSSGLLLMGRT 223

Query: 169 AESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
            ESIS+L  LFSNI       K W+ ACEA YQKYWALVIG PKEKEG+ICAPLSK
Sbjct: 224 KESISHLEWLFSNI-------KAWNDACEAKYQKYWALVIGSPKEKEGIICAPLSK 272



 Score = 43.5 bits (101), Expect(2) = 7e-47
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IK NEVM  G RIYVPVSVAE++ISKR
Sbjct: 114 KIKPNEVMVEGTRIYVPVSVAESRISKR 141


>gb|EXC41018.1| RNA pseudourine synthase 3 [Morus notabilis]
          Length = 449

 Score =  169 bits (429), Expect(2) = 7e-47
 Identities = 84/116 (72%), Positives = 95/116 (81%)
 Frame = -1

Query: 349 DSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 170
           DS+I++LNKPP+LPVKG++P+HNSMD      LSYDY EGPKLVHRLDR+SSGLLLMGRT
Sbjct: 164 DSAILVLNKPPRLPVKGHLPVHNSMDALAAAALSYDYSEGPKLVHRLDRDSSGLLLMGRT 223

Query: 169 AESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
            ESIS+L  LFSNI       K W+ ACEA YQKYWALVIG PKEKEG+ICAPLSK
Sbjct: 224 KESISHLEWLFSNI-------KAWNDACEAKYQKYWALVIGSPKEKEGIICAPLSK 272



 Score = 43.5 bits (101), Expect(2) = 7e-47
 Identities = 21/28 (75%), Positives = 24/28 (85%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IK NEVM  G RIYVPVSVAE++ISKR
Sbjct: 114 KIKPNEVMVEGTRIYVPVSVAESRISKR 141


>ref|XP_006468112.1| PREDICTED: RNA pseudouridine synthase 3, mitochondrial-like [Citrus
           sinensis]
          Length = 471

 Score =  174 bits (440), Expect(2) = 9e-47
 Identities = 83/116 (71%), Positives = 100/116 (86%)
 Frame = -1

Query: 349 DSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGRT 170
           DS+I++LNKPPK+P+KGN+P+HNSMD      LSYD +EGPKLVHRLDRESSGLLLMGRT
Sbjct: 176 DSAILVLNKPPKVPLKGNLPVHNSMDALAAAALSYDNNEGPKLVHRLDRESSGLLLMGRT 235

Query: 169 AESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
            ES+S L  LFS++NK+KSLSK W+ ACEA YQ+YWALVIG P+EK+G+I APLSK
Sbjct: 236 KESVSLLTWLFSDVNKSKSLSKAWNDACEAMYQRYWALVIGSPREKQGIIRAPLSK 291



 Score = 38.9 bits (89), Expect(2) = 9e-47
 Identities = 18/28 (64%), Positives = 24/28 (85%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IK NEVM+ GARI++PVS+ E +ISKR
Sbjct: 122 KIKTNEVMEPGARIFLPVSMVEGRISKR 149


>ref|XP_004300876.1| PREDICTED: RNA pseudourine synthase 3, mitochondrial-like [Fragaria
           vesca subsp. vesca]
          Length = 469

 Score =  172 bits (435), Expect(2) = 3e-46
 Identities = 83/117 (70%), Positives = 96/117 (82%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPPKLPVKGNVP+HNSMD      LSYDYDEGPKLVHRLDRESSG+LLMGR
Sbjct: 176 KDSAIIVLNKPPKLPVKGNVPVHNSMDALAAAALSYDYDEGPKLVHRLDRESSGILLMGR 235

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T ES+  L  L+++IN  KS  + W+ AC A  Q+YWALVIG PKEKEGLICAPL+K
Sbjct: 236 TKESLYLLQSLYTDINVGKSSCRAWNDACRAKCQRYWALVIGSPKEKEGLICAPLTK 292



 Score = 38.9 bits (89), Expect(2) = 3e-46
 Identities = 16/28 (57%), Positives = 25/28 (89%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +I+ +EVM+ GAR+YV VS+AE+K+S+R
Sbjct: 123 KIRPSEVMEEGARVYVAVSIAESKVSRR 150


>ref|NP_178012.2| RNA pseudourine synthase 3 [Arabidopsis thaliana]
           gi|75110951|sp|Q5XET6.1|PUS3_ARATH RecName: Full=RNA
           pseudouridine synthase 3, mitochondrial; AltName:
           Full=RNA pseudouridylate synthase 3; AltName:
           Full=RNA-uridine isomerase 3; Flags: Precursor
           gi|53850479|gb|AAU95416.1| At1g78910 [Arabidopsis
           thaliana] gi|56790228|gb|AAW30031.1| At1g78910
           [Arabidopsis thaliana] gi|332198052|gb|AEE36173.1| RNA
           pseudourine synthase 3 [Arabidopsis thaliana]
          Length = 478

 Score =  168 bits (425), Expect(2) = 1e-45
 Identities = 83/117 (70%), Positives = 94/117 (80%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPPKLPVKGNVPIHNSMD      LS+  DEGP+LVHRLDRE+SGLL+MGR
Sbjct: 184 KDSAIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGNDEGPRLVHRLDRETSGLLVMGR 243

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           T ESI YLH +FS+     S  K W+ ACEA YQ+YWALVIG PKEKEGLI APLSK
Sbjct: 244 TKESIDYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISAPLSK 300



 Score = 41.2 bits (95), Expect(2) = 1e-45
 Identities = 18/28 (64%), Positives = 25/28 (89%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IKHNEVM+ G +I++PVS+AE +ISKR
Sbjct: 131 KIKHNEVMQIGDKIWLPVSIAEMRISKR 158


>ref|XP_002887761.1| hypothetical protein ARALYDRAFT_477057 [Arabidopsis lyrata subsp.
           lyrata] gi|297333602|gb|EFH64020.1| hypothetical protein
           ARALYDRAFT_477057 [Arabidopsis lyrata subsp. lyrata]
          Length = 477

 Score =  166 bits (420), Expect(2) = 4e-45
 Identities = 82/117 (70%), Positives = 94/117 (80%)
 Frame = -1

Query: 352 EDSSIILLNKPPKLPVKGNVPIHNSMDXXXXXXLSYDYDEGPKLVHRLDRESSGLLLMGR 173
           +DS+II+LNKPPKLPVKGNVPIHNSMD      LS+  DEGP+LVHRLDRE+SGLL+MGR
Sbjct: 183 KDSAIIVLNKPPKLPVKGNVPIHNSMDALAAAALSFGKDEGPRLVHRLDRETSGLLVMGR 242

Query: 172 TAESISYLHLLFSNINKAKSLSKDWSAACEATYQKYWALVIGCPKEKEGLICAPLSK 2
           + ESI YLH +FS+     S  K W+ ACEA YQ+YWALVIG PKEKEGLI APLSK
Sbjct: 243 SKESIHYLHSVFSDYKGRNSSCKAWNKACEAMYQQYWALVIGSPKEKEGLISAPLSK 299



 Score = 41.2 bits (95), Expect(2) = 4e-45
 Identities = 18/28 (64%), Positives = 25/28 (89%)
 Frame = -2

Query: 432 QIKHNEVMKRGARIYVPVSVAETKISKR 349
           +IKHNEVM+ G +I++PVS+AE +ISKR
Sbjct: 130 KIKHNEVMEIGDKIWLPVSIAEMRISKR 157