BLASTX nr result
ID: Catharanthus22_contig00029193
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00029193
(233 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY18724.1| Pumilio 4 isoform 3 [Theobroma cacao] 107 1e-21
gb|EOY18723.1| Pumilio 4 isoform 2 [Theobroma cacao] 107 1e-21
gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao] 107 1e-21
ref|XP_006361672.1| PREDICTED: pumilio homolog 4-like [Solanum t... 107 2e-21
gb|ESW15729.1| hypothetical protein PHAVU_007G097100g [Phaseolus... 104 1e-20
ref|XP_004250064.1| PREDICTED: pumilio homolog 3-like [Solanum l... 104 1e-20
ref|XP_006589409.1| PREDICTED: pumilio homolog 4-like isoform X2... 103 2e-20
ref|XP_006589408.1| PREDICTED: pumilio homolog 4-like isoform X1... 103 2e-20
gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis] 103 3e-20
ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|2235... 103 3e-20
ref|XP_004496247.1| PREDICTED: pumilio homolog 4-like isoform X5... 102 7e-20
ref|XP_004496246.1| PREDICTED: pumilio homolog 4-like isoform X4... 102 7e-20
ref|XP_004496245.1| PREDICTED: pumilio homolog 4-like isoform X3... 102 7e-20
ref|XP_004496243.1| PREDICTED: pumilio homolog 4-like isoform X1... 102 7e-20
ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria ... 102 7e-20
ref|XP_002316382.2| pumilio/Puf RNA-binding domain-containing fa... 99 5e-19
gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus pe... 99 5e-19
ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatul... 99 5e-19
ref|XP_002311080.2| hypothetical protein POPTR_0008s03630g [Popu... 99 8e-19
ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [S... 98 1e-18
>gb|EOY18724.1| Pumilio 4 isoform 3 [Theobroma cacao]
Length = 767
Score = 107 bits (268), Expect = 1e-21
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNF------TLLGNDGSISNGGGFTEEEIRSHPAYLAYYY 70
GSAPPTVEG+L+A GSL NP+F T + S SN G +E+EIRSHPAYL+YYY
Sbjct: 48 GSAPPTVEGSLSAVGSLFANPDFGDINGITAVAGSSSSSNNGMLSEDEIRSHPAYLSYYY 107
Query: 69 SNENSNPRLPQPLVSREDWKVAQ 1
S+EN NPRLP PL+S+EDW+VAQ
Sbjct: 108 SHENINPRLPPPLLSKEDWRVAQ 130
>gb|EOY18723.1| Pumilio 4 isoform 2 [Theobroma cacao]
Length = 907
Score = 107 bits (268), Expect = 1e-21
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNF------TLLGNDGSISNGGGFTEEEIRSHPAYLAYYY 70
GSAPPTVEG+L+A GSL NP+F T + S SN G +E+EIRSHPAYL+YYY
Sbjct: 48 GSAPPTVEGSLSAVGSLFANPDFGDINGITAVAGSSSSSNNGMLSEDEIRSHPAYLSYYY 107
Query: 69 SNENSNPRLPQPLVSREDWKVAQ 1
S+EN NPRLP PL+S+EDW+VAQ
Sbjct: 108 SHENINPRLPPPLLSKEDWRVAQ 130
>gb|EOY18722.1| Pumilio 4 isoform 1 [Theobroma cacao]
Length = 1026
Score = 107 bits (268), Expect = 1e-21
Identities = 52/83 (62%), Positives = 63/83 (75%), Gaps = 6/83 (7%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNF------TLLGNDGSISNGGGFTEEEIRSHPAYLAYYY 70
GSAPPTVEG+L+A GSL NP+F T + S SN G +E+EIRSHPAYL+YYY
Sbjct: 48 GSAPPTVEGSLSAVGSLFANPDFGDINGITAVAGSSSSSNNGMLSEDEIRSHPAYLSYYY 107
Query: 69 SNENSNPRLPQPLVSREDWKVAQ 1
S+EN NPRLP PL+S+EDW+VAQ
Sbjct: 108 SHENINPRLPPPLLSKEDWRVAQ 130
>ref|XP_006361672.1| PREDICTED: pumilio homolog 4-like [Solanum tuberosum]
Length = 918
Score = 107 bits (267), Expect = 2e-21
Identities = 55/86 (63%), Positives = 62/86 (72%), Gaps = 9/86 (10%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGG---------FTEEEIRSHPAYLA 79
GSAPPTVEG+L+A GSL RN N N + SNGGG TEE+IRSHPAYLA
Sbjct: 72 GSAPPTVEGSLSAVGSLFRNSNLAQ-SNSSNNSNGGGGGGNSSNDILTEEQIRSHPAYLA 130
Query: 78 YYYSNENSNPRLPQPLVSREDWKVAQ 1
YYYSN N NPRLP PL+SREDW++AQ
Sbjct: 131 YYYSNVNLNPRLPPPLMSREDWRIAQ 156
>gb|ESW15729.1| hypothetical protein PHAVU_007G097100g [Phaseolus vulgaris]
Length = 928
Score = 104 bits (260), Expect = 1e-20
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGFTEEEIRSHPAYLAYYYSNENSN 52
GSAPPTVEG+L+A GSL RN +F L+ ND SN G TE+EIRSHPAYL+YYYS+E+ N
Sbjct: 56 GSAPPTVEGSLSAFGSL-RNSDFGLI-NDRRSSNSGLLTEDEIRSHPAYLSYYYSHESIN 113
Query: 51 PRLPQPLVSREDWKVAQ 1
PRLP PL+S+EDW+VAQ
Sbjct: 114 PRLPPPLLSKEDWRVAQ 130
>ref|XP_004250064.1| PREDICTED: pumilio homolog 3-like [Solanum lycopersicum]
Length = 915
Score = 104 bits (260), Expect = 1e-20
Identities = 53/85 (62%), Positives = 61/85 (71%), Gaps = 8/85 (9%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGG--------FTEEEIRSHPAYLAY 76
GSAPPTVEG+L+ GSL +N N L S +NGGG TEE+IRSHPAYLAY
Sbjct: 72 GSAPPTVEGSLSVVGSLFKNSN---LAQSNSSNNGGGGGNSSNDILTEEQIRSHPAYLAY 128
Query: 75 YYSNENSNPRLPQPLVSREDWKVAQ 1
YYSN N NPRLP PL+SREDW++AQ
Sbjct: 129 YYSNVNLNPRLPPPLMSREDWRIAQ 153
>ref|XP_006589409.1| PREDICTED: pumilio homolog 4-like isoform X2 [Glycine max]
Length = 983
Score = 103 bits (257), Expect = 2e-20
Identities = 52/77 (67%), Positives = 64/77 (83%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGFTEEEIRSHPAYLAYYYSNENSN 52
GSAPPTVEG+L+A GSL RN +F L+ ND +N G TE+EIRSHPAYL+YYYS+E+ N
Sbjct: 59 GSAPPTVEGSLSAFGSL-RNSDFGLI-NDRRSNNNGLLTEDEIRSHPAYLSYYYSHESIN 116
Query: 51 PRLPQPLVSREDWKVAQ 1
PRLP PL+S+EDW+VAQ
Sbjct: 117 PRLPPPLLSKEDWRVAQ 133
>ref|XP_006589408.1| PREDICTED: pumilio homolog 4-like isoform X1 [Glycine max]
Length = 984
Score = 103 bits (257), Expect = 2e-20
Identities = 52/77 (67%), Positives = 64/77 (83%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGFTEEEIRSHPAYLAYYYSNENSN 52
GSAPPTVEG+L+A GSL RN +F L+ ND +N G TE+EIRSHPAYL+YYYS+E+ N
Sbjct: 59 GSAPPTVEGSLSAFGSL-RNSDFGLI-NDRRSNNNGLLTEDEIRSHPAYLSYYYSHESIN 116
Query: 51 PRLPQPLVSREDWKVAQ 1
PRLP PL+S+EDW+VAQ
Sbjct: 117 PRLPPPLLSKEDWRVAQ 133
>gb|EXC32919.1| Pumilio-4-like protein [Morus notabilis]
Length = 989
Score = 103 bits (256), Expect = 3e-20
Identities = 46/77 (59%), Positives = 60/77 (77%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGFTEEEIRSHPAYLAYYYSNENSN 52
GSAPPTVEG+L+A GSL N + + + N GG +E+EIRSHPAYL+YYYS++N N
Sbjct: 40 GSAPPTVEGSLSAVGSLFGNSDVKEINTNSRGFNNGGLSEDEIRSHPAYLSYYYSHDNMN 99
Query: 51 PRLPQPLVSREDWKVAQ 1
PRLP PL+S+EDW++AQ
Sbjct: 100 PRLPPPLLSKEDWRIAQ 116
>ref|XP_002530940.1| pumilio, putative [Ricinus communis] gi|223529499|gb|EEF31455.1|
pumilio, putative [Ricinus communis]
Length = 1024
Score = 103 bits (256), Expect = 3e-20
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 4/81 (4%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGG----FTEEEIRSHPAYLAYYYSN 64
GSAPPTVEG+L+A GSL RNPNF+ + SISN +++EIRSHPAYL+YYYS+
Sbjct: 57 GSAPPTVEGSLSAVGSLFRNPNFS---DVSSISNSSRSNTVLSDDEIRSHPAYLSYYYSH 113
Query: 63 ENSNPRLPQPLVSREDWKVAQ 1
+N NPRLP PL+S+EDW+VAQ
Sbjct: 114 DNINPRLPPPLLSKEDWRVAQ 134
>ref|XP_004496247.1| PREDICTED: pumilio homolog 4-like isoform X5 [Cicer arietinum]
Length = 981
Score = 102 bits (253), Expect = 7e-20
Identities = 53/78 (67%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGF-TEEEIRSHPAYLAYYYSNENS 55
GSAPPTVEG+L+A GSL RN +F GN+ SN GF TE+EIRSHPAYL+YYYS+E+
Sbjct: 57 GSAPPTVEGSLSAYGSL-RNSDFR--GNNSVRSNNNGFLTEDEIRSHPAYLSYYYSHESI 113
Query: 54 NPRLPQPLVSREDWKVAQ 1
NPRLP PL+S+EDW+VAQ
Sbjct: 114 NPRLPPPLLSKEDWRVAQ 131
>ref|XP_004496246.1| PREDICTED: pumilio homolog 4-like isoform X4 [Cicer arietinum]
Length = 982
Score = 102 bits (253), Expect = 7e-20
Identities = 53/78 (67%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGF-TEEEIRSHPAYLAYYYSNENS 55
GSAPPTVEG+L+A GSL RN +F GN+ SN GF TE+EIRSHPAYL+YYYS+E+
Sbjct: 57 GSAPPTVEGSLSAYGSL-RNSDFR--GNNSVRSNNNGFLTEDEIRSHPAYLSYYYSHESI 113
Query: 54 NPRLPQPLVSREDWKVAQ 1
NPRLP PL+S+EDW+VAQ
Sbjct: 114 NPRLPPPLLSKEDWRVAQ 131
>ref|XP_004496245.1| PREDICTED: pumilio homolog 4-like isoform X3 [Cicer arietinum]
Length = 993
Score = 102 bits (253), Expect = 7e-20
Identities = 53/78 (67%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGF-TEEEIRSHPAYLAYYYSNENS 55
GSAPPTVEG+L+A GSL RN +F GN+ SN GF TE+EIRSHPAYL+YYYS+E+
Sbjct: 57 GSAPPTVEGSLSAYGSL-RNSDFR--GNNSVRSNNNGFLTEDEIRSHPAYLSYYYSHESI 113
Query: 54 NPRLPQPLVSREDWKVAQ 1
NPRLP PL+S+EDW+VAQ
Sbjct: 114 NPRLPPPLLSKEDWRVAQ 131
>ref|XP_004496243.1| PREDICTED: pumilio homolog 4-like isoform X1 [Cicer arietinum]
gi|502118392|ref|XP_004496244.1| PREDICTED: pumilio
homolog 4-like isoform X2 [Cicer arietinum]
Length = 994
Score = 102 bits (253), Expect = 7e-20
Identities = 53/78 (67%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGF-TEEEIRSHPAYLAYYYSNENS 55
GSAPPTVEG+L+A GSL RN +F GN+ SN GF TE+EIRSHPAYL+YYYS+E+
Sbjct: 57 GSAPPTVEGSLSAYGSL-RNSDFR--GNNSVRSNNNGFLTEDEIRSHPAYLSYYYSHESI 113
Query: 54 NPRLPQPLVSREDWKVAQ 1
NPRLP PL+S+EDW+VAQ
Sbjct: 114 NPRLPPPLLSKEDWRVAQ 131
>ref|XP_004307367.1| PREDICTED: pumilio homolog 4-like [Fragaria vesca subsp. vesca]
Length = 1022
Score = 102 bits (253), Expect = 7e-20
Identities = 49/78 (62%), Positives = 61/78 (78%), Gaps = 1/78 (1%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSIS-NGGGFTEEEIRSHPAYLAYYYSNENS 55
GSAPPTVEG+L+A GSL RN +F +S N GGF+E+E+RSH AYL+YYYS++N
Sbjct: 57 GSAPPTVEGSLSAVGSLFRNSDFRDRDMSSRVSSNNGGFSEDEVRSHIAYLSYYYSHDNI 116
Query: 54 NPRLPQPLVSREDWKVAQ 1
NPR P PL+SREDW+VAQ
Sbjct: 117 NPRNPPPLLSREDWRVAQ 134
>ref|XP_002316382.2| pumilio/Puf RNA-binding domain-containing family protein [Populus
trichocarpa] gi|550330425|gb|EEF02553.2| pumilio/Puf
RNA-binding domain-containing family protein [Populus
trichocarpa]
Length = 1001
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/77 (63%), Positives = 59/77 (76%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGFTEEEIRSHPAYLAYYYSNENSN 52
GSAPPTVEG+L+A GSL RN N L + S+SN E+EIRSHP+YL YYYS++N N
Sbjct: 44 GSAPPTVEGSLSAVGSLFRNYN---LSDVNSVSNNVVLAEDEIRSHPSYLLYYYSHDNIN 100
Query: 51 PRLPQPLVSREDWKVAQ 1
PRLP PL+S+EDW VAQ
Sbjct: 101 PRLPPPLLSKEDWLVAQ 117
>gb|EMJ21481.1| hypothetical protein PRUPE_ppa000731mg [Prunus persica]
Length = 1021
Score = 99.4 bits (246), Expect = 5e-19
Identities = 48/77 (62%), Positives = 61/77 (79%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGFTEEEIRSHPAYLAYYYSNENSN 52
GSAPPTVEG+LTA GSL N +F + + S +N G +E+EIRSHP YL+YYYS++N N
Sbjct: 57 GSAPPTVEGSLTAVGSLFGNSDFRDVTSRIS-NNNGVLSEDEIRSHPTYLSYYYSHDNIN 115
Query: 51 PRLPQPLVSREDWKVAQ 1
PRLP PL+SREDW++AQ
Sbjct: 116 PRLPPPLLSREDWRIAQ 132
>ref|XP_003591862.1| 60S ribosomal protein L4 [Medicago truncatula]
gi|355480910|gb|AES62113.1| 60S ribosomal protein L4
[Medicago truncatula]
Length = 1176
Score = 99.4 bits (246), Expect = 5e-19
Identities = 49/77 (63%), Positives = 62/77 (80%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGGFTEEEIRSHPAYLAYYYSNENSN 52
GSAPPTVEG+L+A GSL RN ++ + S +N G TE+EIRSHPAYL+YYYS+E+ N
Sbjct: 52 GSAPPTVEGSLSAFGSL-RNFDYRANNSGRSNNNDGVLTEDEIRSHPAYLSYYYSHESIN 110
Query: 51 PRLPQPLVSREDWKVAQ 1
PRLP PL+S+EDW+VAQ
Sbjct: 111 PRLPPPLLSKEDWRVAQ 127
>ref|XP_002311080.2| hypothetical protein POPTR_0008s03630g [Populus trichocarpa]
gi|566182194|ref|XP_006379542.1| pumilio/Puf RNA-binding
domain-containing family protein [Populus trichocarpa]
gi|566182196|ref|XP_002311079.2| hypothetical protein
POPTR_0008s03630g [Populus trichocarpa]
gi|550332361|gb|EEE88447.2| hypothetical protein
POPTR_0008s03630g [Populus trichocarpa]
gi|550332362|gb|ERP57339.1| pumilio/Puf RNA-binding
domain-containing family protein [Populus trichocarpa]
gi|550332363|gb|EEE88446.2| hypothetical protein
POPTR_0008s03630g [Populus trichocarpa]
Length = 1031
Score = 98.6 bits (244), Expect = 8e-19
Identities = 50/81 (61%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTLLGNDGSISNGGG----FTEEEIRSHPAYLAYYYSN 64
GSAPPTVEG+L+A GSL RN N + + N + SNG TEEEIRSHP+YL+YYYS+
Sbjct: 57 GSAPPTVEGSLSAVGSLFRNNNLSDI-NSVTSSNGNCNNVVLTEEEIRSHPSYLSYYYSH 115
Query: 63 ENSNPRLPQPLVSREDWKVAQ 1
++ NPRLP PL+S+EDW+VAQ
Sbjct: 116 DSINPRLPPPLLSKEDWRVAQ 136
>ref|XP_002453050.1| hypothetical protein SORBIDRAFT_04g037410 [Sorghum bicolor]
gi|241932881|gb|EES06026.1| hypothetical protein
SORBIDRAFT_04g037410 [Sorghum bicolor]
Length = 998
Score = 98.2 bits (243), Expect = 1e-18
Identities = 50/82 (60%), Positives = 57/82 (69%), Gaps = 5/82 (6%)
Frame = -3
Query: 231 GSAPPTVEGALTAAGSLHRNPNFTL--LGNDGSISNGGGF---TEEEIRSHPAYLAYYYS 67
GSAPPTVEG+ TA G+L P LG G G G TEEEIRSHPAYL+YYYS
Sbjct: 42 GSAPPTVEGSRTAIGALFSGPPLPANNLGGSGGGGTGAGIDMLTEEEIRSHPAYLSYYYS 101
Query: 66 NENSNPRLPQPLVSREDWKVAQ 1
NE+ NPRLP P+VS+EDW+ AQ
Sbjct: 102 NEHLNPRLPPPMVSKEDWRAAQ 123