BLASTX nr result

ID: Catharanthus22_contig00029166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00029166
         (520 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006363802.1| PREDICTED: 60S ribosomal protein L23a-like i...    64   2e-08
ref|XP_004231945.1| PREDICTED: 60S ribosomal protein L23a-like [...    64   2e-08
ref|XP_006828752.1| hypothetical protein AMTR_s00001p00069970 [A...    62   8e-08
ref|XP_002311143.1| predicted protein [Populus trichocarpa]            62   1e-07
ref|XP_002311158.2| hypothetical protein POPTR_0008s05000g [Popu...    62   1e-07
sp|O22644.1|RL23A_FRIAG RecName: Full=60S ribosomal protein L23A...    61   1e-07
ref|NP_001275353.1| 60S ribosomal protein L23a-like [Solanum tub...    61   1e-07
ref|NP_001042974.1| Os01g0348700 [Oryza sativa Japonica Group] g...    60   4e-07
ref|XP_006650068.1| PREDICTED: 60S ribosomal protein L23A-like [...    60   4e-07
ref|XP_006400921.1| hypothetical protein EUTSA_v10015923mg, part...    60   4e-07
ref|XP_004976124.1| PREDICTED: 60S ribosomal protein L23A-like [...    60   4e-07
ref|XP_004953076.1| PREDICTED: 60S ribosomal protein L23A-like [...    60   4e-07
gb|EMT01725.1| 60S ribosomal protein L23a [Aegilops tauschii]          60   4e-07
gb|EMS59805.1| 60S ribosomal protein L23a [Triticum urartu]            60   4e-07
gb|AAC24573.1| ribosomal protein L25 [Zea mays]                        60   4e-07
gb|AFK43650.1| unknown [Lotus japonicus]                               60   4e-07
gb|AFK37689.1| unknown [Lotus japonicus]                               60   4e-07
emb|CBI32672.3| unnamed protein product [Vitis vinifera]               60   4e-07
ref|XP_002278186.1| PREDICTED: 60S ribosomal protein L23a-like [...    60   4e-07
gb|EEC77577.1| hypothetical protein OsI_16522 [Oryza sativa Indi...    60   4e-07

>ref|XP_006363802.1| PREDICTED: 60S ribosomal protein L23a-like isoform X1 [Solanum
           tuberosum]
          Length = 230

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           I+ A +K+  ++ KKVNT +MPDG KKAYVML PNHSAL+VAKK++ +
Sbjct: 183 IRDAVKKLFKIEMKKVNTSIMPDGTKKAYVMLTPNHSALDVAKKIKAI 230


>ref|XP_004231945.1| PREDICTED: 60S ribosomal protein L23a-like [Solanum lycopersicum]
          Length = 230

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 39/48 (81%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           I+ A +K+  ++ KKVNT +MPDG KKAYVML PNHSAL+VAKK++ +
Sbjct: 183 IRDAVKKLFKIELKKVNTSIMPDGTKKAYVMLTPNHSALDVAKKIKAI 230


>ref|XP_006828752.1| hypothetical protein AMTR_s00001p00069970 [Amborella trichopoda]
           gi|548833731|gb|ERM96168.1| hypothetical protein
           AMTR_s00001p00069970 [Amborella trichopoda]
          Length = 154

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P+H AL+VA K+ I+
Sbjct: 107 IKAAVKKMYDIQAKKVNTLIRPDGKKKAYVRLTPDHDALDVANKIGII 154


>ref|XP_002311143.1| predicted protein [Populus trichocarpa]
          Length = 144

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +QTKKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 97  IKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 144


>ref|XP_002311158.2| hypothetical protein POPTR_0008s05000g [Populus trichocarpa]
           gi|118481483|gb|ABK92684.1| unknown [Populus
           trichocarpa] gi|118482744|gb|ABK93290.1| unknown
           [Populus trichocarpa] gi|550332450|gb|EEE88525.2|
           hypothetical protein POPTR_0008s05000g [Populus
           trichocarpa]
          Length = 153

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 29/48 (60%), Positives = 38/48 (79%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +QTKKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 106 IKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>sp|O22644.1|RL23A_FRIAG RecName: Full=60S ribosomal protein L23A gi|2641201|gb|AAB86852.1|
           ribosomal protein L23a [Fritillaria agrestis]
          Length = 154

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +QTKKVNTL+ PDG KKAYV L P++ AL++A K+ I+
Sbjct: 107 IKAAVKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDIANKIGII 154


>ref|NP_001275353.1| 60S ribosomal protein L23a-like [Solanum tuberosum]
           gi|460402488|ref|XP_004246744.1| PREDICTED: 60S
           ribosomal protein L23a-like [Solanum lycopersicum]
           gi|76573339|gb|ABA46774.1| ribosomal protein L25-like
           protein [Solanum tuberosum]
          Length = 153

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 28/48 (58%), Positives = 38/48 (79%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +QTKK+NTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 106 IKAAVKKMYDIQTKKINTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>ref|NP_001042974.1| Os01g0348700 [Oryza sativa Japonica Group] gi|582044905|pdb|3J61|X
           Chain X, Localization Of The Large Subunit Ribosomal
           Proteins Into A 5.5 A Cryo-em Map Of Triticum Aestivum
           Translating 80s Ribosome gi|15290206|dbj|BAB63895.1|
           putative 60S ribosomal protein L23A [Oryza sativa
           Japonica Group] gi|21104815|dbj|BAB93400.1| putative 60S
           ribosomal protein L23A [Oryza sativa Japonica Group]
           gi|113532505|dbj|BAF04888.1| Os01g0348700 [Oryza sativa
           Japonica Group] gi|125525818|gb|EAY73932.1| hypothetical
           protein OsI_01816 [Oryza sativa Indica Group]
           gi|125570289|gb|EAZ11804.1| hypothetical protein
           OsJ_01678 [Oryza sativa Japonica Group]
          Length = 152

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 105 IKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 152


>ref|XP_006650068.1| PREDICTED: 60S ribosomal protein L23A-like [Oryza brachyantha]
           gi|573950539|ref|XP_006657561.1| PREDICTED: 60S
           ribosomal protein L23A-like [Oryza brachyantha]
          Length = 152

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 105 IKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 152


>ref|XP_006400921.1| hypothetical protein EUTSA_v10015923mg, partial [Eutrema
           salsugineum] gi|557102011|gb|ESQ42374.1| hypothetical
           protein EUTSA_v10015923mg, partial [Eutrema salsugineum]
          Length = 126

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IK A +K+  +QTKKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 79  IKDAIKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 126


>ref|XP_004976124.1| PREDICTED: 60S ribosomal protein L23A-like [Setaria italica]
          Length = 152

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 105 IKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 152


>ref|XP_004953076.1| PREDICTED: 60S ribosomal protein L23A-like [Setaria italica]
          Length = 151

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 104 IKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 151


>gb|EMT01725.1| 60S ribosomal protein L23a [Aegilops tauschii]
          Length = 256

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 209 IKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 256


>gb|EMS59805.1| 60S ribosomal protein L23a [Triticum urartu]
          Length = 176

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 129 IKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 176


>gb|AAC24573.1| ribosomal protein L25 [Zea mays]
          Length = 109

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 62  IKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 109


>gb|AFK43650.1| unknown [Lotus japonicus]
          Length = 155

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 108 IKAAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 155


>gb|AFK37689.1| unknown [Lotus japonicus]
          Length = 153

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 106 IKAAVKKMYDIQAKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 153


>emb|CBI32672.3| unnamed protein product [Vitis vinifera]
          Length = 70

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IK A +K+  +QTKKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 23  IKDAMKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 70


>ref|XP_002278186.1| PREDICTED: 60S ribosomal protein L23a-like [Vitis vinifera]
          Length = 155

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IK A +K+  +QTKKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 108 IKDAMKKMYDIQTKKVNTLIRPDGTKKAYVRLTPDYDALDVANKIGII 155


>gb|EEC77577.1| hypothetical protein OsI_16522 [Oryza sativa Indica Group]
          Length = 165

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -3

Query: 518 IKAAFEKISGVQTKKVNTLMMPDGNKKAYVMLRPNHSALEVAKKLRIV 375
           IKAA +K+  +Q KKVNTL+ PDG KKAYV L P++ AL+VA K+ I+
Sbjct: 118 IKAAVKKMYDIQAKKVNTLIRPDGKKKAYVKLTPDYDALDVANKIGII 165


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