BLASTX nr result
ID: Catharanthus22_contig00028901
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00028901
(660 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002535305.1| conserved hypothetical protein [Ricinus comm... 207 1e-62
gb|AGC78860.1| hypothetical protein (mitochondrion) [Vicia faba] 85 9e-32
ref|YP_588335.1| hypothetical protein ZeamMp073 [Zea mays subsp.... 80 9e-29
ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ... 126 5e-27
ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabac... 122 9e-26
ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygr... 115 2e-23
ref|XP_003588296.1| hypothetical protein MTR_1g005540 [Medicago ... 111 2e-22
gb|EXC34909.1| hypothetical protein L484_020025 [Morus notabilis] 87 2e-20
gb|ESW21654.1| hypothetical protein PHAVU_005G088500g, partial [... 94 4e-17
ref|XP_006369813.1| hypothetical protein POPTR_0001s32560g [Popu... 89 9e-16
gb|EEC75928.1| hypothetical protein OsI_13019 [Oryza sativa Indi... 78 2e-12
gb|EHK62710.1| hypothetical protein M3S_K09, partial (mitochondr... 75 2e-11
>ref|XP_002535305.1| conserved hypothetical protein [Ricinus communis]
gi|223523491|gb|EEF27078.1| conserved hypothetical
protein [Ricinus communis]
Length = 183
Score = 207 bits (528), Expect(2) = 1e-62
Identities = 103/136 (75%), Positives = 106/136 (77%)
Frame = -1
Query: 606 MNCRVNRSDPDAAVAPRRYGLDPLLPTPGHRSMSGIGGNILDVTTPWGLCRPAFRSIHS* 427
MNCRV+RSDPDAAVAPRRYGLDPLLP PG+ SMSGI G+ILDV
Sbjct: 1 MNCRVDRSDPDAAVAPRRYGLDPLLPIPGYHSMSGIRGDILDV----------------- 43
Query: 426 GGRSRTLQVWERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRL 247
WERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRL
Sbjct: 44 ---------WERSWSGKAKTAPRIWVARGRLCPDGGALWGRAQPNRDSTPPTSSAPLYRL 94
Query: 246 NHSKGLVGGTGEPREL 199
NHS GLVGGTGEPREL
Sbjct: 95 NHSNGLVGGTGEPREL 110
Score = 58.9 bits (141), Expect(2) = 1e-62
Identities = 30/34 (88%), Positives = 30/34 (88%)
Frame = -2
Query: 104 QACTPYLRLLRHAVDSFIREGKKGPKHGRCRTLE 3
QACT LRLLR AVDSFIREGKKGPKH RCRTLE
Sbjct: 112 QACT--LRLLRQAVDSFIREGKKGPKHLRCRTLE 143
>gb|AGC78860.1| hypothetical protein (mitochondrion) [Vicia faba]
Length = 102
Score = 85.1 bits (209), Expect(2) = 9e-32
Identities = 40/48 (83%), Positives = 40/48 (83%)
Frame = +2
Query: 356 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQGVVTSSMFPP 499
MRGAVLAFPDQDRSHTCSVRDRP QLCIDRKAGRHSPQG PP
Sbjct: 1 MRGAVLAFPDQDRSHTCSVRDRPTQLCIDRKAGRHSPQGSGYVQYVPP 48
Score = 78.6 bits (192), Expect(2) = 9e-32
Identities = 38/39 (97%), Positives = 38/39 (97%)
Frame = +3
Query: 522 PGWVGAGRVRIAAEQQPRPDLIYLLGNSSGDFTVAKEAP 638
PG VGAGRVRIAAEQQPRPDLIYLLGNSSGDFTVAKEAP
Sbjct: 57 PGGVGAGRVRIAAEQQPRPDLIYLLGNSSGDFTVAKEAP 95
>ref|YP_588335.1| hypothetical protein ZeamMp073 [Zea mays subsp. mays]
gi|40795119|gb|AAR91163.1| hypothetical protein
(mitochondrion) [Zea mays]
Length = 105
Score = 79.7 bits (195), Expect(2) = 9e-29
Identities = 40/49 (81%), Positives = 41/49 (83%), Gaps = 2/49 (4%)
Frame = +2
Query: 356 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ--GVVTSSMFP 496
M+GAVLA P QDRS TC VRDRPPQLCIDRKAGR SPQ GVVTSSM P
Sbjct: 1 MQGAVLALPSQDRSRTCHVRDRPPQLCIDRKAGRQSPQPTGVVTSSMSP 49
Score = 73.9 bits (180), Expect(2) = 9e-29
Identities = 35/39 (89%), Positives = 35/39 (89%)
Frame = +3
Query: 522 PGWVGAGRVRIAAEQQPRPDLIYLLGNSSGDFTVAKEAP 638
PGWVGAGRVRI AEQ RPD IYLLGNSSGDFTVAKEAP
Sbjct: 60 PGWVGAGRVRITAEQLQRPDQIYLLGNSSGDFTVAKEAP 98
>ref|YP_002608359.1| orf104 [Vitis vinifera] gi|209954156|emb|CAQ77593.1| orf104 [Vitis
vinifera] gi|239764779|gb|ACS15247.1| ORF104 [Vitis
vinifera]
Length = 103
Score = 126 bits (317), Expect = 5e-27
Identities = 59/69 (85%), Positives = 62/69 (89%), Gaps = 3/69 (4%)
Frame = +3
Query: 441 IERQGGT---APREWLRPVCSPLFPTCYGAPGWVGAGRVRIAAEQQPRPDLIYLLGNSSG 611
I+R+ G PREWLRPVC PLFPTCYGAPGW+GAGRVRIAAEQQPRPDLIYLLGNSSG
Sbjct: 28 IDRKAGRHSPQPREWLRPVCPPLFPTCYGAPGWIGAGRVRIAAEQQPRPDLIYLLGNSSG 87
Query: 612 DFTVAKEAP 638
DFTVAKEAP
Sbjct: 88 DFTVAKEAP 96
Score = 82.4 bits (202), Expect = 1e-13
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = +2
Query: 356 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ 469
MRGAVLA PDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ
Sbjct: 1 MRGAVLALPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ 38
>ref|YP_173422.1| hypothetical protein NitaMp080 [Nicotiana tabacum]
gi|565382489|ref|XP_006357570.1| PREDICTED:
uncharacterized protein LOC102598655 [Solanum tuberosum]
gi|56806586|dbj|BAD83487.1| hypothetical protein
(mitochondrion) [Nicotiana tabacum]
Length = 103
Score = 122 bits (306), Expect = 9e-26
Identities = 58/69 (84%), Positives = 60/69 (86%), Gaps = 3/69 (4%)
Frame = +3
Query: 441 IERQGGT---APREWLRPVCSPLFPTCYGAPGWVGAGRVRIAAEQQPRPDLIYLLGNSSG 611
I+R+ G PREWLRPVC PLFPTCYG P WVGAGRVRIAAEQQPRPDLIYLLGNSSG
Sbjct: 28 IDRKAGRHSPQPREWLRPVCPPLFPTCYGTPEWVGAGRVRIAAEQQPRPDLIYLLGNSSG 87
Query: 612 DFTVAKEAP 638
DFTVAKEAP
Sbjct: 88 DFTVAKEAP 96
Score = 84.7 bits (208), Expect = 2e-14
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +2
Query: 356 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ 469
MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ
Sbjct: 1 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ 38
>ref|YP_005090415.1| orf3 gene product (mitochondrion) [Boea hygrometrica]
gi|340549503|gb|AEK53324.1| hypothetical protein
(mitochondrion) [Boea hygrometrica]
Length = 103
Score = 115 bits (287), Expect = 2e-23
Identities = 56/69 (81%), Positives = 58/69 (84%), Gaps = 3/69 (4%)
Frame = +3
Query: 441 IERQGGT---APREWLRPVCSPLFPTCYGAPGWVGAGRVRIAAEQQPRPDLIYLLGNSSG 611
I+R+GG RE LRPVC PLFPTCYGAPGWVGAGR R AAEQQPRPDLIYLLGNSS
Sbjct: 28 IDRRGGRHSPQQRECLRPVCPPLFPTCYGAPGWVGAGRARSAAEQQPRPDLIYLLGNSSS 87
Query: 612 DFTVAKEAP 638
DFTVAKEAP
Sbjct: 88 DFTVAKEAP 96
Score = 82.4 bits (202), Expect = 1e-13
Identities = 43/69 (62%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Frame = +2
Query: 356 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ-----GVVTSSMFPPIPDMLRC 520
MRGAVLAFPDQDRSHTCSVRDRPPQLCIDR+ GRHSPQ V +FP
Sbjct: 1 MRGAVLAFPDQDRSHTCSVRDRPPQLCIDRRGGRHSPQQRECLRPVCPPLFPTCYGAPGW 60
Query: 521 PGVGRSGSS 547
G GR+ S+
Sbjct: 61 VGAGRARSA 69
>ref|XP_003588296.1| hypothetical protein MTR_1g005540 [Medicago truncatula]
gi|355477344|gb|AES58547.1| hypothetical protein
MTR_1g005540 [Medicago truncatula]
Length = 90
Score = 111 bits (277), Expect = 2e-22
Identities = 53/55 (96%), Positives = 53/55 (96%)
Frame = +2
Query: 200 SSRGSPVPPTRPLE*FSRYRGALEVGGVLSLLGWALPHKAPPSGHKRPLATHMRG 364
SSRGSPVPPTR LE FSRYRGALEVGGVLSLLGWALPHKAPPSGHKRPLATHMRG
Sbjct: 34 SSRGSPVPPTRLLELFSRYRGALEVGGVLSLLGWALPHKAPPSGHKRPLATHMRG 88
Score = 59.3 bits (142), Expect = 1e-06
Identities = 39/84 (46%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Frame = +3
Query: 120 GDSLPKRRKGWIKKRGYYEPSAPRI-------*PARVVHRFHRLDP*SDSVDTEVRLKWG 278
GDSLPKRRKGWIKKRGYYEPSAPRI P R++ F R + L W
Sbjct: 9 GDSLPKRRKGWIKKRGYYEPSAPRISSRGSPVPPTRLLELFSRYRGALEVGGVLSLLGWA 68
Query: 279 VCCPYWAGPF----PIRPHRRGIS 338
+ P+ A P P+ H RG S
Sbjct: 69 L--PHKAPPSGHKRPLATHMRGRS 90
>gb|EXC34909.1| hypothetical protein L484_020025 [Morus notabilis]
Length = 62
Score = 87.0 bits (214), Expect(2) = 2e-20
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = -1
Query: 606 MNCRVNRSDPDAAVAPRRYGLDPLLPTPGHRSMSGIGGNILDVTTP 469
MNCRV+RSD DAAVAPRRYGLDPLLPTPGH SMSGI G+ILDVTTP
Sbjct: 1 MNCRVDRSDRDAAVAPRRYGLDPLLPTPGHYSMSGIRGDILDVTTP 46
Score = 38.5 bits (88), Expect(2) = 2e-20
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -2
Query: 482 T*PLPGGCAALPFDRYTVE 426
T PL GGCAALPFDRYTVE
Sbjct: 44 TTPLVGGCAALPFDRYTVE 62
>gb|ESW21654.1| hypothetical protein PHAVU_005G088500g, partial [Phaseolus
vulgaris]
Length = 80
Score = 94.0 bits (232), Expect = 4e-17
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = +2
Query: 437 IDRKAGRHSPQGVVTSSMFPPIPDMLRCPGVGRSGSSPYRRGATAASGSDLFTRQFIR 610
I+R+ G +P+GVVTSSM P IPDML CPGVGRSGSSPYRRGATAASGSDL TRQ+IR
Sbjct: 23 IERQGGTAAPKGVVTSSMSPLIPDMLWCPGVGRSGSSPYRRGATAASGSDLSTRQYIR 80
Score = 69.7 bits (169), Expect = 7e-10
Identities = 37/52 (71%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Frame = +3
Query: 375 PSLTRIAPTPVAFVIGLLNCVSIERQGGT-APREWLRPVCSPLFPTCYGAPG 527
PSLTRIAPTPVAFVIGLLNCVSIERQGGT AP+ + SPL P PG
Sbjct: 1 PSLTRIAPTPVAFVIGLLNCVSIERQGGTAAPKGVVTSSMSPLIPDMLWCPG 52
>ref|XP_006369813.1| hypothetical protein POPTR_0001s32560g [Populus trichocarpa]
gi|550348715|gb|ERP66382.1| hypothetical protein
POPTR_0001s32560g [Populus trichocarpa]
Length = 80
Score = 89.4 bits (220), Expect = 9e-16
Identities = 44/60 (73%), Positives = 47/60 (78%)
Frame = -1
Query: 609 RMNCRVNRSDPDAAVAPRRYGLDPLLPTPGHRSMSGIGGNILDVTTPWGLCRPAFRSIHS 430
RMNCRV+RSDPDAAVAPRRYGLDPLLPTPG+ SMSG+ G G RPAFRSIHS
Sbjct: 21 RMNCRVDRSDPDAAVAPRRYGLDPLLPTPGYHSMSGMTGGHTGRNHSLGSGRPAFRSIHS 80
>gb|EEC75928.1| hypothetical protein OsI_13019 [Oryza sativa Indica Group]
Length = 313
Score = 77.8 bits (190), Expect(2) = 2e-12
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +2
Query: 119 R*FTTEAKKRLDQEKGVLRALCPTHLTSSRGSPVPPTRPLE 241
R TTEAKKRLDQEKGVLRALCPTHLTSSRGSPVPPT PL+
Sbjct: 263 RFLTTEAKKRLDQEKGVLRALCPTHLTSSRGSPVPPTSPLD 303
Score = 20.8 bits (42), Expect(2) = 2e-12
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1
Query: 238 RVIQSIQRCA 267
RVI SIQRCA
Sbjct: 304 RVILSIQRCA 313
>gb|EHK62710.1| hypothetical protein M3S_K09, partial (mitochondrion) [Sorghum
bicolor]
Length = 56
Score = 75.1 bits (183), Expect = 2e-11
Identities = 37/44 (84%), Positives = 37/44 (84%), Gaps = 2/44 (4%)
Frame = +2
Query: 371 LAFPDQDRSHTCSVRDRPPQLCIDRKAGRHSPQ--GVVTSSMFP 496
LA P QDRSHTC VRDRPPQLCIDRKAGR SPQ GVVTSSM P
Sbjct: 1 LALPSQDRSHTCHVRDRPPQLCIDRKAGRQSPQPTGVVTSSMSP 44