BLASTX nr result
ID: Catharanthus22_contig00028796
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00028796
(328 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 138 9e-31
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 137 1e-30
gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|3860380... 137 1e-30
emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera] 136 3e-30
emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera] 135 4e-30
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 135 6e-30
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 135 6e-30
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 135 7e-30
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 134 1e-29
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 134 1e-29
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 134 2e-29
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 130 1e-28
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 130 1e-28
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 130 1e-28
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 129 4e-28
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 129 4e-28
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 127 2e-27
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 126 3e-27
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t... 124 2e-26
emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera] 121 1e-25
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 138 bits (347), Expect = 9e-31
Identities = 63/86 (73%), Positives = 71/86 (82%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
A RNWE+HQMDVHNAFLHGDL EEVYMK+ PGF AS+P+K CRL K LYGL+QAPRCWF
Sbjct: 921 AVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVCRLRKALYGLKQAPRCWF 980
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRK 71
KLT +L++ GF QS ADYSLFT K
Sbjct: 981 EKLTTALKRYGFQQSLADYSLFTLVK 1006
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 137 bits (345), Expect = 1e-30
Identities = 63/106 (59%), Positives = 76/106 (71%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA ++WEVHQMDVHNAFLHGDL EEVYM++ PGF+ S+P K CRL K LYGL+QAPRCWF
Sbjct: 1084 AAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWF 1143
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKNKXXXXXXXXXXXXXISGNN 11
SKL+ +LR GF QSY DYSLF+ + ++GNN
Sbjct: 1144 SKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGNN 1189
>gb|AAM98191.1| unknown protein [Arabidopsis thaliana] gi|38603804|gb|AAR24647.1|
At2g23330 [Arabidopsis thaliana]
gi|110742535|dbj|BAE99183.1| putative retroelement pol
polyprotein [Arabidopsis thaliana]
Length = 776
Score = 137 bits (345), Expect = 1e-30
Identities = 63/106 (59%), Positives = 76/106 (71%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA ++WEVHQMDVHNAFLHGDL EEVYM++ PGF+ S+P K CRL K LYGL+QAPRCWF
Sbjct: 364 AAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWF 423
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKNKXXXXXXXXXXXXXISGNN 11
SKL+ +LR GF QSY DYSLF+ + ++GNN
Sbjct: 424 SKLSTALRNIGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGNN 469
>emb|CAN61658.1| hypothetical protein VITISV_040310 [Vitis vinifera]
Length = 1461
Score = 136 bits (343), Expect = 3e-30
Identities = 64/107 (59%), Positives = 78/107 (72%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA++NWE+HQMDVHNAFLHGDL EEVYMK+ PGF S+P+ CRL K LYGL+QAPRCWF
Sbjct: 1049 AASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWF 1108
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKNKXXXXXXXXXXXXXISGNNA 8
+KL +L+ GF QSY+DYSLFT+ K ISGN++
Sbjct: 1109 AKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIISGNDS 1155
>emb|CAN82171.1| hypothetical protein VITISV_040546 [Vitis vinifera]
Length = 1129
Score = 135 bits (341), Expect = 4e-30
Identities = 64/107 (59%), Positives = 79/107 (73%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA++NWE+HQMDVHNAFLHGDL EEVYMK+ PGF +S+P+ CRL K LYGL+QAPRCWF
Sbjct: 717 AASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLWKSLYGLKQAPRCWF 776
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKNKXXXXXXXXXXXXXISGNNA 8
+KL +L+ GF QSY+DYSLFT+ K ISGN++
Sbjct: 777 AKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIISGNDS 823
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 135 bits (340), Expect = 6e-30
Identities = 64/107 (59%), Positives = 77/107 (71%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA++NWE+HQMDVHNAFLHGDL EEVYMK+ PGF S+P+ CRL K LYGL+QAPRCWF
Sbjct: 687 AASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWF 746
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKNKXXXXXXXXXXXXXISGNNA 8
SKL +L+ GF QSY+DYSLFT+ ISGN++
Sbjct: 747 SKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLIISGNDS 793
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 135 bits (340), Expect = 6e-30
Identities = 64/107 (59%), Positives = 77/107 (71%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA++NWE+HQMDVHNAFLHGDL EEVYMK+ PGF S+P+ CRL K LYGL+QAPRCWF
Sbjct: 766 AASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFERSDPNLVCRLRKSLYGLKQAPRCWF 825
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKNKXXXXXXXXXXXXXISGNNA 8
SKL +L+ GF QSY+DYSLFT+ ISGN++
Sbjct: 826 SKLVTALKGYGFLQSYSDYSLFTYTTGNVQINVLVYVDDLIISGNDS 872
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 135 bits (339), Expect = 7e-30
Identities = 61/86 (70%), Positives = 70/86 (81%)
Frame = -1
Query: 325 ATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWFS 146
A WEV+QMDVHNAFLHGDL EEVYMK+ PGFR S+P K CRL K LYGL+QAPRCWF
Sbjct: 1090 AANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFK 1149
Query: 145 KLTDSLRQCGFAQSYADYSLFTFRKN 68
KL+DSL + GF QSY DYSLF++ +N
Sbjct: 1150 KLSDSLLRFGFVQSYEDYSLFSYTRN 1175
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 134 bits (338), Expect = 1e-29
Identities = 63/107 (58%), Positives = 77/107 (71%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA++NWE+HQMDVHNAFLHGDL EEVYMK+ PGF + +P+ CRL K LYGL+QAPRCWF
Sbjct: 893 AASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESXDPNLVCRLRKSLYGLKQAPRCWF 952
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKNKXXXXXXXXXXXXXISGNNA 8
+KL L+ GF QSY+DYSLFT+ K ISGN++
Sbjct: 953 AKLVTXLKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIISGNDS 999
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 134 bits (337), Expect = 1e-29
Identities = 62/107 (57%), Positives = 78/107 (72%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA++NWE+HQMDVHNAF HGDL EEVYMK+ PGF +S+P+ CRL K LYGL+QAPRCWF
Sbjct: 761 AASKNWELHQMDVHNAFSHGDLEEEVYMKLPPGFESSDPNLVCRLRKSLYGLKQAPRCWF 820
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKNKXXXXXXXXXXXXXISGNNA 8
+KL +L+ GF QSY+DYSLFT+ K ISG+++
Sbjct: 821 AKLVTALKGYGFLQSYSDYSLFTYTKGNVQINVLVYVDDLIISGBDS 867
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 134 bits (336), Expect = 2e-29
Identities = 59/86 (68%), Positives = 73/86 (84%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA++NWE+HQMDVHNAFLHGDL EEVYMK+ PGF +S+P+ CRL K LYGL+QAPRCWF
Sbjct: 1049 AASKNWELHQMDVHNAFLHGDLEEEVYMKLPPGFESSDPNLVCRLRKSLYGLKQAPRCWF 1108
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRK 71
+KL +L+ GF QSY++YSLFT+ K
Sbjct: 1109 AKLVTALKGYGFLQSYSNYSLFTYTK 1134
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 130 bits (328), Expect = 1e-28
Identities = 58/87 (66%), Positives = 71/87 (81%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA R+W VHQMDVHNAFLHGDL EEVYMK+ GF+ +P K CRL+K LYGL+QAPRCWF
Sbjct: 697 AAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWF 756
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKN 68
SKL+ +L+Q GF QS +DYSLF++ +
Sbjct: 757 SKLSSALKQYGFTQSLSDYSLFSYNND 783
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 130 bits (328), Expect = 1e-28
Identities = 58/87 (66%), Positives = 71/87 (81%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA R+W VHQMDVHNAFLHGDL EEVYMK+ GF+ +P K CRL+K LYGL+QAPRCWF
Sbjct: 697 AAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWF 756
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKN 68
SKL+ +L+Q GF QS +DYSLF++ +
Sbjct: 757 SKLSSALKQYGFTQSLSDYSLFSYNND 783
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 130 bits (328), Expect = 1e-28
Identities = 58/87 (66%), Positives = 71/87 (81%)
Frame = -1
Query: 328 AATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWF 149
AA R+W VHQMDVHNAFLHGDL EEVYMK+ GF+ +P K CRL+K LYGL+QAPRCWF
Sbjct: 1056 AAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWF 1115
Query: 148 SKLTDSLRQCGFAQSYADYSLFTFRKN 68
SKL+ +L+Q GF QS +DYSLF++ +
Sbjct: 1116 SKLSSALKQYGFTQSLSDYSLFSYNND 1142
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 129 bits (324), Expect = 4e-28
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -1
Query: 325 ATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWFS 146
A WEV+QMDVHNAFLHGDL EEVYMK+ PGFR S+P K CRL K LYGL+QAPRCWF
Sbjct: 1080 AANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFK 1139
Query: 145 KLTDSLRQCGFAQSYADYSLFTF 77
KL+D+L++ GF Q Y DYS F++
Sbjct: 1140 KLSDALKRFGFIQGYEDYSFFSY 1162
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 129 bits (324), Expect = 4e-28
Identities = 57/83 (68%), Positives = 67/83 (80%)
Frame = -1
Query: 325 ATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWFS 146
A WEV+QMDVHNAFLHGDL EEVYMK+ PGFR S+P K CRL K LYGL+QAPRCWF
Sbjct: 1080 AANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFK 1139
Query: 145 KLTDSLRQCGFAQSYADYSLFTF 77
KL+D+L++ GF Q Y DYS F++
Sbjct: 1140 KLSDALKRFGFIQGYEDYSFFSY 1162
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 127 bits (318), Expect = 2e-27
Identities = 57/83 (68%), Positives = 65/83 (78%)
Frame = -1
Query: 316 NWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWFSKLT 137
+WEVHQMDVHNAFLHGDL EEVYM+ PGFR + K CRL K LYGL+QAPRCWF+KLT
Sbjct: 1078 DWEVHQMDVHNAFLHGDLDEEVYMQFPPGFRTGDKTKVCRLRKSLYGLKQAPRCWFAKLT 1137
Query: 136 DSLRQCGFAQSYADYSLFTFRKN 68
+L+ GF Q +DYSLF F KN
Sbjct: 1138 SALKNYGFIQDISDYSLFIFHKN 1160
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 126 bits (316), Expect = 3e-27
Identities = 56/86 (65%), Positives = 68/86 (79%)
Frame = -1
Query: 325 ATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWFS 146
A WEV+QMDV+NAFLHGDL EEVYMK+ PGFR S+P K CRL K LYGL+QAPRCWF
Sbjct: 737 AANQWEVYQMDVNNAFLHGDLDEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFK 796
Query: 145 KLTDSLRQCGFAQSYADYSLFTFRKN 68
KL+D+L + GF Q + DYS F++ +N
Sbjct: 797 KLSDALLRFGFVQGHEDYSFFSYTRN 822
>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1462
Score = 124 bits (310), Expect = 2e-26
Identities = 56/86 (65%), Positives = 66/86 (76%)
Frame = -1
Query: 325 ATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWFS 146
A+ +WEVHQMDVHNAFLHGDL EEVY+K PGF + + K CRL K LYGL+QAPRCWF+
Sbjct: 1037 ASLDWEVHQMDVHNAFLHGDLDEEVYIKFPPGFGSDDNRKVCRLRKALYGLKQAPRCWFA 1096
Query: 145 KLTDSLRQCGFAQSYADYSLFTFRKN 68
KLT +L GF Q +DYSLFT +N
Sbjct: 1097 KLTTALNDYGFIQDISDYSLFTMERN 1122
>emb|CAN82073.1| hypothetical protein VITISV_036538 [Vitis vinifera]
Length = 1157
Score = 121 bits (303), Expect = 1e-25
Identities = 54/83 (65%), Positives = 65/83 (78%)
Frame = -1
Query: 325 ATRNWEVHQMDVHNAFLHGDLTEEVYMKISPGFRASNPHKGCRLNK*LYGLRQAPRCWFS 146
A + WE+HQMDVHNAFLHG+L EEVYM++SPGF + P K C L K LYGL+QAP+CWF+
Sbjct: 791 AMKGWELHQMDVHNAFLHGELDEEVYMQMSPGFASPTPGKVCGLRKSLYGLQQAPKCWFA 850
Query: 145 KLTDSLRQCGFAQSYADYSLFTF 77
KL +L GF QSY DYSLFT+
Sbjct: 851 KLVAALTSYGFKQSYLDYSLFTY 873