BLASTX nr result
ID: Catharanthus22_contig00028690
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00028690
(256 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212... 110 2e-22
emb|CAN69019.1| hypothetical protein VITISV_006852 [Vitis vinifera] 107 2e-21
emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera] 106 3e-21
emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera] 105 5e-21
emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera] 105 6e-21
emb|CAN61443.1| hypothetical protein VITISV_044238 [Vitis vinifera] 104 1e-20
emb|CAN63013.1| hypothetical protein VITISV_008177 [Vitis vinifera] 102 4e-20
emb|CAN70885.1| hypothetical protein VITISV_018629 [Vitis vinifera] 102 5e-20
emb|CAN79109.1| hypothetical protein VITISV_000312 [Vitis vinifera] 102 7e-20
emb|CAN62460.1| hypothetical protein VITISV_035911 [Vitis vinifera] 102 7e-20
emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group] 102 7e-20
gb|ABA98980.2| retrotransposon protein, putative, Ty1-copia subc... 102 7e-20
gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group] 101 9e-20
emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa Japonica Group] 101 9e-20
emb|CAH66560.1| OSIGBa0113K06.6 [Oryza sativa Indica Group] 101 9e-20
gb|ABF97883.1| retrotransposon protein, putative, unclassified [... 101 9e-20
gb|AAK00427.2| Putative copia-type pol polyprotein [Oryza sativa... 100 2e-19
emb|CAN61754.1| hypothetical protein VITISV_035311 [Vitis vinifera] 100 3e-19
gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-ty... 100 3e-19
emb|CAE05094.3| OSJNBa0009K15.14 [Oryza sativa Japonica Group] 100 3e-19
>ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
Length = 2598
Score = 110 bits (274), Expect = 2e-22
Identities = 51/74 (68%), Positives = 61/74 (82%)
Frame = -3
Query: 224 NFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRDHLTIGTKWIFRHK 45
N A +SQIEP+ DA CDEFWI+AMQEELNQFERNKV LVPRP + IGTKW+FR+K
Sbjct: 1632 NLAFVSQIEPRSFKDAECDEFWILAMQEELNQFERNKVWKLVPRPSNASIIGTKWVFRNK 1691
Query: 44 LNESGEVIRNKARL 3
++E+G +IRNKARL
Sbjct: 1692 MDENGNIIRNKARL 1705
>emb|CAN69019.1| hypothetical protein VITISV_006852 [Vitis vinifera]
Length = 492
Score = 107 bits (267), Expect = 2e-21
Identities = 52/87 (59%), Positives = 70/87 (80%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GVRT +R +N A +SQIEPK I+DAL DE W+IAMQEELNQFER++V LVPRP++
Sbjct: 143 GVRTRSSLRNICNNLAFISQIEPKNINDALVDENWMIAMQEELNQFERSEVWELVPRPQN 202
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
IGT+W+FR+K++E+G +++NKARL
Sbjct: 203 QSVIGTRWVFRNKMDENGIIVKNKARL 229
>emb|CAN76317.1| hypothetical protein VITISV_012360 [Vitis vinifera]
Length = 1409
Score = 106 bits (265), Expect = 3e-21
Identities = 53/87 (60%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GVRT +R +N A +SQIEPK I DAL DE WII MQEELNQFER++V L+PRP++
Sbjct: 963 GVRTRSSLRNICNNLAFISQIEPKNIKDALVDENWIIVMQEELNQFERSEVWELMPRPQN 1022
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
IGT+W+FR+K++E+G +IRNKARL
Sbjct: 1023 QSVIGTRWVFRNKMDENGIIIRNKARL 1049
>emb|CAN64335.1| hypothetical protein VITISV_001808 [Vitis vinifera]
Length = 1885
Score = 105 bits (263), Expect = 5e-21
Identities = 52/87 (59%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GVRT +R +N A +SQIEPK I DA+ DE W+IAMQ+ELNQFER++V LVPRP +
Sbjct: 941 GVRTRSSLRNICNNLAFISQIEPKNIKDAIVDENWMIAMQKELNQFERSEVWELVPRPSN 1000
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
IGTKW+FR+K++E+G ++RNKARL
Sbjct: 1001 QSVIGTKWVFRNKMDENGIIVRNKARL 1027
>emb|CAN63777.1| hypothetical protein VITISV_043745 [Vitis vinifera]
Length = 898
Score = 105 bits (262), Expect = 6e-21
Identities = 52/87 (59%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GVRT +R +N A + QIEPK I DA+ DE W+IAMQEELNQFER++V LVPRP +
Sbjct: 602 GVRTRSSLRNICNNLAFIXQIEPKNIKDAIVDENWMIAMQEELNQFERSEVWELVPRPSN 661
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
IGTKW+FR+K++E+G ++RNKARL
Sbjct: 662 QSVIGTKWVFRNKMDENGIIVRNKARL 688
>emb|CAN61443.1| hypothetical protein VITISV_044238 [Vitis vinifera]
Length = 650
Score = 104 bits (260), Expect = 1e-20
Identities = 52/87 (59%), Positives = 68/87 (78%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GVRT +R +NFA +SQIEPK I+DAL DE W+IAMQEELNQFERN+V LV RP +
Sbjct: 131 GVRTRSSLRNICNNFAFISQIEPKNINDALVDENWMIAMQEELNQFERNEVWELVARPSN 190
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
IGT+W+FR+K++E+ ++RNK+RL
Sbjct: 191 QSVIGTRWVFRNKMDENXIILRNKSRL 217
>emb|CAN63013.1| hypothetical protein VITISV_008177 [Vitis vinifera]
Length = 630
Score = 102 bits (255), Expect = 4e-20
Identities = 52/87 (59%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRTI---RYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GVRTI R +N A +SQI+PK I+DAL DE W+IAMQE+LNQFER+ V VPRP +
Sbjct: 175 GVRTIPSLRNICNNLAFISQIKPKNINDALIDENWMIAMQEKLNQFERSGVWESVPRPSN 234
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
IGT+W+FR+K++E+G +IRNKARL
Sbjct: 235 QSVIGTRWVFRNKMDENGVIIRNKARL 261
>emb|CAN70885.1| hypothetical protein VITISV_018629 [Vitis vinifera]
Length = 1003
Score = 102 bits (254), Expect = 5e-20
Identities = 50/87 (57%), Positives = 67/87 (77%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GVRT +R +N A +SQIEPK I++ L DE W+IAMQEELNQFER++V L PRP +
Sbjct: 64 GVRTRSSLRNIFNNLAFISQIEPKNINNVLDDENWMIAMQEELNQFERSEVWELAPRPSN 123
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
IGT+W+FR+K++E+G ++RNKARL
Sbjct: 124 QSVIGTRWVFRNKIDENGIIVRNKARL 150
>emb|CAN79109.1| hypothetical protein VITISV_000312 [Vitis vinifera]
Length = 788
Score = 102 bits (253), Expect = 7e-20
Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GVRT +R +N A +SQIEPK ++D L DE W+IAMQ ELNQFER++V LVPRP +
Sbjct: 141 GVRTRSSLRNICNNLAFISQIEPKNLNDVLVDENWMIAMQXELNQFERSEVWELVPRPSN 200
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
IGT+W+FR+K+ E+G ++RNKARL
Sbjct: 201 QSFIGTRWVFRNKMEENGIIVRNKARL 227
>emb|CAN62460.1| hypothetical protein VITISV_035911 [Vitis vinifera]
Length = 557
Score = 102 bits (253), Expect = 7e-20
Identities = 50/87 (57%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GVRT ++ +N A +SQ EPK I DA+ DE W+IAMQEELN+FER++V LVPRP +
Sbjct: 78 GVRTRSSLKNICNNLAFISQTEPKNIKDAIVDENWMIAMQEELNKFERSEVWELVPRPSN 137
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
IGTKW+FR+K+NE+ ++RNKARL
Sbjct: 138 QSVIGTKWVFRNKMNENDIIVRNKARL 164
>emb|CAH66897.1| OSIGBa0099L20.12 [Oryza sativa Indica Group]
Length = 711
Score = 102 bits (253), Expect = 7e-20
Identities = 50/87 (57%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GV+T + ++++ +S +EPK +D+ALCD W+ AM EELN F RNKV TLV RPRD
Sbjct: 180 GVQTRSRVASICEHYSFVSCLEPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVERPRD 239
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
H IGTKWIFR+K +E+G V+RNKARL
Sbjct: 240 HNVIGTKWIFRNKQDENGLVVRNKARL 266
>gb|ABA98980.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1606
Score = 102 bits (253), Expect = 7e-20
Identities = 50/87 (57%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GV+T + ++++ +S +EPK +D+ALCD W+ AM EELN F RNKV TLV RPRD
Sbjct: 840 GVQTRSHVASICEHYSFVSCLEPKHVDEALCDPDWMNAMHEELNNFARNKVLTLVERPRD 899
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
H IGTKWIFR+K +E+G V+RNKARL
Sbjct: 900 HNVIGTKWIFRNKQDENGLVVRNKARL 926
>gb|AAW57784.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1411
Score = 101 bits (252), Expect = 9e-20
Identities = 51/87 (58%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GV+T I ++++ +S +EPK +D+ALCD W+ AM EELN F RNKV TLV RPRD
Sbjct: 880 GVQTRSRIASICEHYSFVSCLEPKHVDEALCDLDWMNAMHEELNNFARNKVWTLVERPRD 939
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
H IGTKWIFR+K +E+G V+RNKARL
Sbjct: 940 HNVIGTKWIFRNKQDENGLVVRNKARL 966
>emb|CAE03782.2| OSJNBa0063G07.6 [Oryza sativa Japonica Group]
Length = 1539
Score = 101 bits (252), Expect = 9e-20
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GV+T + ++++ +S +EPK +D+ALCD W+ AM EELN F RNKV TLV RPRD
Sbjct: 1037 GVQTLSRVASICEHYSFVSCLEPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVERPRD 1096
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
H IGTKW+FR+K +E+G V+RNKARL
Sbjct: 1097 HNVIGTKWVFRNKQDENGLVVRNKARL 1123
>emb|CAH66560.1| OSIGBa0113K06.6 [Oryza sativa Indica Group]
Length = 1539
Score = 101 bits (252), Expect = 9e-20
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GV+T + ++++ +S +EPK +D+ALCD W+ AM EELN F RNKV TLV RPRD
Sbjct: 1037 GVQTLSRVASICEHYSFVSCLEPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVERPRD 1096
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
H IGTKW+FR+K +E+G V+RNKARL
Sbjct: 1097 HNVIGTKWVFRNKQDENGLVVRNKARL 1123
>gb|ABF97883.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1441
Score = 101 bits (252), Expect = 9e-20
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GV+T + ++++ +S +EPK +D+ALCD W+ AM EELN F RNKV TLV RPRD
Sbjct: 910 GVQTRSRVASICEHYSFVSCLEPKHVDEALCDPDWMNAMHEELNNFARNKVWTLVERPRD 969
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
H IGTKW+FR+K +E+G V+RNKARL
Sbjct: 970 HNVIGTKWVFRNKQDENGLVVRNKARL 996
>gb|AAK00427.2| Putative copia-type pol polyprotein [Oryza sativa Japonica Group]
gi|31429784|gb|AAP51786.1| retrotransposon protein,
putative, unclassified [Oryza sativa Japonica Group]
Length = 1377
Score = 100 bits (250), Expect = 2e-19
Identities = 49/87 (56%), Positives = 65/87 (74%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GV+T + ++++ +S +EPK +D+ALCD W+ AM EELN F RNKV TLV RPRD
Sbjct: 898 GVQTRSRVASICEHYSFVSCLEPKHVDEALCDLDWMNAMHEELNNFARNKVWTLVERPRD 957
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
H IGTKW+FR+K +E+G V+RNKARL
Sbjct: 958 HNVIGTKWVFRNKQDENGLVVRNKARL 984
>emb|CAN61754.1| hypothetical protein VITISV_035311 [Vitis vinifera]
Length = 461
Score = 100 bits (248), Expect = 3e-19
Identities = 46/81 (56%), Positives = 64/81 (79%)
Frame = -3
Query: 245 TIRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRDHLTIGT 66
++R +N A +SQIEPK I+D L DE W+IAMQEELNQFER++V L+PRP + IGT
Sbjct: 361 SLRNICNNLAFISQIEPKNINDILDDENWMIAMQEELNQFERSEVWELIPRPSNQSVIGT 420
Query: 65 KWIFRHKLNESGEVIRNKARL 3
+W+FR+K++E+ ++RNKARL
Sbjct: 421 RWVFRNKMDENXIIVRNKARL 441
>gb|ABD32582.1| Integrase, catalytic region; Zinc finger, CCHC-type; Peptidase
aspartic, catalytic [Medicago truncatula]
Length = 1715
Score = 99.8 bits (247), Expect = 3e-19
Identities = 48/71 (67%), Positives = 57/71 (80%)
Frame = -3
Query: 215 LLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRDHLTIGTKWIFRHKLNE 36
LLS IEPK +++AL D+ WI+AMQEELNQF+RN V LVP+P IGTKW+FR+KLNE
Sbjct: 1202 LLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPSQKNIIGTKWVFRNKLNE 1261
Query: 35 SGEVIRNKARL 3
GEV RNKARL
Sbjct: 1262 QGEVTRNKARL 1272
>emb|CAE05094.3| OSJNBa0009K15.14 [Oryza sativa Japonica Group]
Length = 845
Score = 99.8 bits (247), Expect = 3e-19
Identities = 47/87 (54%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Frame = -3
Query: 254 GVRT---IRYFIDNFALLSQIEPKFIDDALCDEFWIIAMQEELNQFERNKV*TLVPRPRD 84
GV+T + ++++ +S +EPK +D+ALCD W+ AM EELN F RNKV T + RPRD
Sbjct: 314 GVQTRSRVASICEHYSFVSCLEPKHVDEALCDPDWMNAMHEELNNFARNKVWTFIERPRD 373
Query: 83 HLTIGTKWIFRHKLNESGEVIRNKARL 3
H IGTKW+FR+K +E+G V+RNKARL
Sbjct: 374 HNVIGTKWVFRNKQDENGLVVRNKARL 400