BLASTX nr result

ID: Catharanthus22_contig00028678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00028678
         (293 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    49   1e-05

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 48.9 bits (115), Expect(2) = 1e-05
 Identities = 22/36 (61%), Positives = 24/36 (66%)
 Frame = +2

Query: 158 ERLDHAFYNSKWFQLFPKLQVNHLIIIFSDHCPLFI 265
           ERLD A  NS+W  LFP  +V HL   FSDHCPL I
Sbjct: 196 ERLDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLLI 231



 Score = 25.8 bits (55), Expect(2) = 1e-05
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 103 FSGPKFT*LNKRSGGRL 153
           F GPKFT  N R+GG L
Sbjct: 177 FQGPKFTWTNGRTGGSL 193


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