BLASTX nr result

ID: Catharanthus22_contig00028502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00028502
         (276 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006339069.1| PREDICTED: small RNA degrading nuclease 3-li...    79   8e-13
ref|XP_004249491.1| PREDICTED: small RNA degrading nuclease 3-li...    79   8e-13
gb|EOX91538.1| Exonuclease, putative isoform 3, partial [Theobro...    77   2e-12
gb|EOX91536.1| Exonuclease, putative isoform 1 [Theobroma cacao]...    77   2e-12
gb|AFK41173.1| unknown [Lotus japonicus]                               75   9e-12
ref|XP_006393922.1| hypothetical protein EUTSA_v10003942mg [Eutr...    72   6e-11
ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-li...    72   6e-11
ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-li...    71   1e-10
emb|CBI33775.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_004288001.1| PREDICTED: small RNA degrading nuclease 3-li...    71   2e-10
ref|XP_002524917.1| exonuclease, putative [Ricinus communis] gi|...    71   2e-10
gb|EMJ09151.1| hypothetical protein PRUPE_ppa017261mg, partial [...    70   2e-10
ref|NP_201525.2| small RNA degrading nuclease 3 [Arabidopsis tha...    70   2e-10
dbj|BAB10958.1| unnamed protein product [Arabidopsis thaliana]         70   2e-10
ref|NP_001190639.1| small RNA degrading nuclease 3 [Arabidopsis ...    70   2e-10
ref|XP_006282161.1| hypothetical protein CARUB_v10028420mg [Caps...    70   3e-10
ref|XP_002865016.1| exonuclease [Arabidopsis lyrata subsp. lyrat...    70   3e-10
ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-li...    69   5e-10
emb|CAN59800.1| hypothetical protein VITISV_038872 [Vitis vinifera]    68   1e-09
dbj|BAJ87940.1| predicted protein [Hordeum vulgare subsp. vulgare]     67   2e-09

>ref|XP_006339069.1| PREDICTED: small RNA degrading nuclease 3-like [Solanum tuberosum]
          Length = 497

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/49 (71%), Positives = 43/49 (87%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E K+ S K+EVL E+VKL+QKR +KGSKGGWK+FL+SYDKKLG S+SDP
Sbjct: 2   ESKLESAKKEVLAEIVKLAQKREMKGSKGGWKDFLRSYDKKLGVSLSDP 50


>ref|XP_004249491.1| PREDICTED: small RNA degrading nuclease 3-like [Solanum
           lycopersicum]
          Length = 497

 Score = 78.6 bits (192), Expect = 8e-13
 Identities = 35/49 (71%), Positives = 43/49 (87%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E K+ S K+EVL E+VKL+QKR +KGSKGGWK+FL+SYDKKLG S+SDP
Sbjct: 2   ESKLESAKKEVLAEIVKLAQKREMKGSKGGWKDFLRSYDKKLGVSLSDP 50


>gb|EOX91538.1| Exonuclease, putative isoform 3, partial [Theobroma cacao]
          Length = 442

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 34/49 (69%), Positives = 44/49 (89%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           +EK+ + +++VLVE+VKL QKRGLKG++GGWKEFL SYDKK GAS+SDP
Sbjct: 2   DEKLDTAEKKVLVEIVKLVQKRGLKGTEGGWKEFLNSYDKKFGASLSDP 50


>gb|EOX91536.1| Exonuclease, putative isoform 1 [Theobroma cacao]
           gi|508699641|gb|EOX91537.1| Exonuclease, putative
           isoform 1 [Theobroma cacao]
          Length = 459

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 34/49 (69%), Positives = 44/49 (89%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           +EK+ + +++VLVE+VKL QKRGLKG++GGWKEFL SYDKK GAS+SDP
Sbjct: 2   DEKLDTAEKKVLVEIVKLVQKRGLKGTEGGWKEFLNSYDKKFGASLSDP 50


>gb|AFK41173.1| unknown [Lotus japonicus]
          Length = 525

 Score = 75.1 bits (183), Expect = 9e-12
 Identities = 33/53 (62%), Positives = 45/53 (84%)
 Frame = -3

Query: 160 MSSFEEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           M++ ++KI +  ++VLV++VKLSQKRG+KG+ G WKEFL SYDKK GAS+SDP
Sbjct: 1   MANMDDKIDAADKKVLVDIVKLSQKRGMKGNLGDWKEFLNSYDKKFGASMSDP 53


>ref|XP_006393922.1| hypothetical protein EUTSA_v10003942mg [Eutrema salsugineum]
           gi|557090561|gb|ESQ31208.1| hypothetical protein
           EUTSA_v10003942mg [Eutrema salsugineum]
          Length = 550

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/66 (53%), Positives = 44/66 (66%)
 Frame = -3

Query: 199 RVDGRQVEGDTVKMSSFEEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLG 20
           R DGR+      +    E K+++ ++ VLVE+VKL QKR L G  GGWKEFL  YDKK G
Sbjct: 9   RFDGRRSSSYQFQYLVMEHKLATAEKRVLVELVKLVQKRDLVGENGGWKEFLNVYDKKFG 68

Query: 19  ASVSDP 2
           +SVSDP
Sbjct: 69  SSVSDP 74


>ref|XP_003550038.1| PREDICTED: small RNA degrading nuclease 3-like [Glycine max]
          Length = 509

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 32/49 (65%), Positives = 42/49 (85%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E+KI +  ++VLV++VKL+QKRGLKG+ GGWKEFL S+DKK GA +SDP
Sbjct: 2   EDKIETADKKVLVDIVKLAQKRGLKGNLGGWKEFLNSHDKKFGAGLSDP 50


>ref|XP_002278458.2| PREDICTED: small RNA degrading nuclease 3-like [Vitis vinifera]
          Length = 389

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 31/49 (63%), Positives = 42/49 (85%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           +  + + ++EVLVEMVKL+QKRGL+GSKG WK+FL +YD+KLG S+SDP
Sbjct: 2   DNTLVNAEKEVLVEMVKLAQKRGLEGSKGSWKDFLSTYDRKLGPSLSDP 50


>emb|CBI33775.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 31/49 (63%), Positives = 42/49 (85%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           +  + + ++EVLVEMVKL+QKRGL+GSKG WK+FL +YD+KLG S+SDP
Sbjct: 2   DNTLVNAEKEVLVEMVKLAQKRGLEGSKGSWKDFLSTYDRKLGPSLSDP 50


>ref|XP_004288001.1| PREDICTED: small RNA degrading nuclease 3-like [Fragaria vesca
           subsp. vesca]
          Length = 524

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 44/49 (89%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E+ +++ +++VLVE+VK++QKRG+KGSKG WK+FL SYDKK G+S+SDP
Sbjct: 2   EDFLATAEKKVLVEIVKVAQKRGMKGSKGDWKQFLTSYDKKFGSSLSDP 50


>ref|XP_002524917.1| exonuclease, putative [Ricinus communis]
           gi|223535752|gb|EEF37414.1| exonuclease, putative
           [Ricinus communis]
          Length = 504

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 43/49 (87%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E K+++V  ++LVE+VKL+QK+G KG++GGWKEFL  YDKK+G+S+SDP
Sbjct: 2   ENKLATVPEKILVEIVKLAQKQGRKGTQGGWKEFLNVYDKKIGSSLSDP 50


>gb|EMJ09151.1| hypothetical protein PRUPE_ppa017261mg, partial [Prunus persica]
          Length = 417

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 31/46 (67%), Positives = 41/46 (89%)
 Frame = -3

Query: 139 ISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           I++ +++VLVE+VKLSQKRG+KG+KG WK+FL  YDKK GAS+SDP
Sbjct: 5   IATAEKKVLVEIVKLSQKRGMKGNKGDWKQFLNIYDKKFGASLSDP 50


>ref|NP_201525.2| small RNA degrading nuclease 3 [Arabidopsis thaliana]
           gi|75330762|sp|Q8RXK2.1|SDN3_ARATH RecName: Full=Small
           RNA degrading nuclease 3 gi|19423880|gb|AAL87318.1|
           unknown protein [Arabidopsis thaliana]
           gi|25055029|gb|AAN71976.1| unknown protein [Arabidopsis
           thaliana] gi|332010934|gb|AED98317.1| small RNA
           degrading nuclease 3 [Arabidopsis thaliana]
          Length = 782

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 42/49 (85%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E K+++ ++++LV++VKL QKRGL+G  GGWKEFL  YDKKLG+S+SDP
Sbjct: 2   EHKLATAEKKLLVDLVKLVQKRGLEGENGGWKEFLNVYDKKLGSSLSDP 50


>dbj|BAB10958.1| unnamed protein product [Arabidopsis thaliana]
          Length = 782

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 42/49 (85%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E K+++ ++++LV++VKL QKRGL+G  GGWKEFL  YDKKLG+S+SDP
Sbjct: 2   EHKLATAEKKLLVDLVKLVQKRGLEGENGGWKEFLNVYDKKLGSSLSDP 50


>ref|NP_001190639.1| small RNA degrading nuclease 3 [Arabidopsis thaliana]
           gi|332010935|gb|AED98318.1| small RNA degrading nuclease
           3 [Arabidopsis thaliana]
          Length = 762

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/49 (61%), Positives = 42/49 (85%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E K+++ ++++LV++VKL QKRGL+G  GGWKEFL  YDKKLG+S+SDP
Sbjct: 2   EHKLATAEKKLLVDLVKLVQKRGLEGENGGWKEFLNVYDKKLGSSLSDP 50


>ref|XP_006282161.1| hypothetical protein CARUB_v10028420mg [Capsella rubella]
           gi|482550865|gb|EOA15059.1| hypothetical protein
           CARUB_v10028420mg [Capsella rubella]
          Length = 640

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/49 (61%), Positives = 41/49 (83%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E K+++ +++VLVE+VKL QKRGL+G  GGWK+FL  YDKK G+S+SDP
Sbjct: 2   EHKLATAEKKVLVELVKLVQKRGLEGENGGWKDFLNVYDKKFGSSLSDP 50


>ref|XP_002865016.1| exonuclease [Arabidopsis lyrata subsp. lyrata]
           gi|297310851|gb|EFH41275.1| exonuclease [Arabidopsis
           lyrata subsp. lyrata]
          Length = 776

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 30/49 (61%), Positives = 41/49 (83%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E K+++ +++VLV++VKL QKRGL+G  GGWKEFL  YDKK G+S+SDP
Sbjct: 2   EHKLATAEKKVLVDLVKLVQKRGLEGENGGWKEFLNVYDKKFGSSLSDP 50


>ref|XP_004141901.1| PREDICTED: small RNA degrading nuclease 3-like [Cucumis sativus]
           gi|449517369|ref|XP_004165718.1| PREDICTED: small RNA
           degrading nuclease 3-like [Cucumis sativus]
          Length = 524

 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 31/49 (63%), Positives = 42/49 (85%)
 Frame = -3

Query: 148 EEKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E+KI++ +++VLVEMV+L+QKRG+ GS+G WKEFL S D K GAS+SDP
Sbjct: 2   EDKIATAEKKVLVEMVRLTQKRGMTGSEGDWKEFLNSRDPKFGASMSDP 50


>emb|CAN59800.1| hypothetical protein VITISV_038872 [Vitis vinifera]
          Length = 1151

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/40 (75%), Positives = 37/40 (92%)
 Frame = -3

Query: 121 EVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           +VLVEMVKL+QKRGL+GSKG WK+FL +YD+KLG S+SDP
Sbjct: 614 QVLVEMVKLAQKRGLEGSKGSWKDFLSTYDRKLGPSLSDP 653


>dbj|BAJ87940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 290

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 29/48 (60%), Positives = 40/48 (83%)
 Frame = -3

Query: 145 EKISSVKREVLVEMVKLSQKRGLKGSKGGWKEFLKSYDKKLGASVSDP 2
           E+++  ++EVLVE+V+ +QK GLKG++GGWK+FL   DKK GASVSDP
Sbjct: 3   ERLAGAEKEVLVEIVRFTQKNGLKGAEGGWKDFLARNDKKFGASVSDP 50


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