BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00028395
         (333 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL i...   100   2e-19
ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    97   2e-18
ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    96   4e-18
gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|AAG34886.1|AF261031_1 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|AAG38498.1|AF261032_6 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|AAG34884.1|AF261029_1 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|AAG38500.1|AF261032_8 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|AAG34882.1|AF261027_1 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|AAG38496.1|AF261032_4 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|AAG34883.1|AF261028_1 putative chloroplast RNA helicase VDL' ...    96   6e-18
gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus pe...    94   2e-17
gb|ESW25915.1| hypothetical protein PHAVU_003G0764001g, partial ...    94   2e-17
ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutr...    94   2e-17
ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabido...    93   3e-17
ref|XP_006584069.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    93   4e-17
ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Caps...    93   4e-17
ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    93   4e-17

>gb|AAG34873.1|AF261020_1 putative chloroplast RNA helicase VDL isoform 1 [Nicotiana tabacum]
           gi|11385590|gb|AAG34876.1|AF261021_1 putative
           chloroplast RNA helicase VDL isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score =  100 bits (250), Expect = 2e-19
 Identities = 44/64 (68%), Positives = 56/64 (87%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +TLR+LC GHVPEHVI R+EE+GY+ PT VQ+Q+LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATLRELCHGHVPEHVIRRVEEVGYVIPTEVQLQALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>ref|XP_004229420.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Solanum lycopersicum]
          Length = 459

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 45/67 (67%), Positives = 54/67 (80%)
 Frame = -3

Query: 202 TEAENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQT 23
           T    ++++ +TLR+LC GHV EHVI R EEIGY+ PT VQ+Q+LP LFSGRDCVL AQT
Sbjct: 47  TTTLTKDSSTTTLRELCYGHVQEHVILRAEEIGYVMPTKVQLQALPFLFSGRDCVLHAQT 106

Query: 22  GSGKTLA 2
           GSGKTLA
Sbjct: 107 GSGKTLA 113


>ref|XP_006349223.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic-like [Solanum tuberosum]
          Length = 462

 Score = 96.3 bits (238), Expect = 4e-18
 Identities = 44/67 (65%), Positives = 54/67 (80%)
 Frame = -3

Query: 202 TEAENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQT 23
           T    ++++ +TLR+LC GHV EHVI R EE+GY+ PT VQ+Q+LP LFSGRDCVL AQT
Sbjct: 47  TTTLTKDSSTTTLRELCYGHVQEHVIRRAEEVGYVIPTEVQLQALPFLFSGRDCVLHAQT 106

Query: 22  GSGKTLA 2
           GSGKTLA
Sbjct: 107 GSGKTLA 113


>gb|AAG38497.1|AF261032_5 putative chloroplast RNA helicase VDL' isoform 5 [Nicotiana
           tabacum]
          Length = 289

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|AAG34886.1|AF261031_1 putative chloroplast RNA helicase VDL' isoform 8 [Nicotiana
           tabacum]
          Length = 188

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|AAG38498.1|AF261032_6 putative chloroplast RNA helicase VDL' isoform 6 [Nicotiana
           tabacum]
          Length = 226

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|AAG34879.1|AF261024_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 466

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|AAG34884.1|AF261029_1 putative chloroplast RNA helicase VDL' isoform 6 [Nicotiana
           tabacum]
          Length = 294

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|AAG38500.1|AF261032_8 putative chloroplast RNA helicase VDL' isoform 8 [Nicotiana
           tabacum]
          Length = 191

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|AAG38493.1|AF261032_1 putative chloroplast RNA helicase VDL' isoform 1 [Nicotiana
           tabacum]
          Length = 365

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|AAG34882.1|AF261027_1 putative chloroplast RNA helicase VDL' isoform 4 [Nicotiana
           tabacum]
          Length = 425

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|AAG38496.1|AF261032_4 putative chloroplast RNA helicase VDL' isoform 4 [Nicotiana
           tabacum]
          Length = 324

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|AAG34883.1|AF261028_1 putative chloroplast RNA helicase VDL' isoform 5 [Nicotiana
           tabacum]
          Length = 390

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 42/64 (65%), Positives = 54/64 (84%)
 Frame = -3

Query: 193 ENRENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSG 14
           E ++++ +T R+LC GHVPEHVI R+EE+GY+ PT VQ+ +LP L+SGRDCVL AQTGSG
Sbjct: 57  ETKDSSTATPRELCHGHVPEHVIRRVEEVGYVIPTEVQLLALPFLYSGRDCVLHAQTGSG 116

Query: 13  KTLA 2
           KTLA
Sbjct: 117 KTLA 120


>gb|EMJ24082.1| hypothetical protein PRUPE_ppa005191mg [Prunus persica]
          Length = 473

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 40/55 (72%), Positives = 49/55 (89%)
 Frame = -3

Query: 169 TLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTL 5
           TLRQ+CQ HVP+HV+C+MEE+G++ PT VQ Q+LP LFSGRDC+L AQTGSGKTL
Sbjct: 73  TLRQICQSHVPDHVLCKMEELGFVVPTPVQRQALPTLFSGRDCILHAQTGSGKTL 127


>gb|ESW25915.1| hypothetical protein PHAVU_003G0764001g, partial [Phaseolus
           vulgaris]
          Length = 340

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/58 (68%), Positives = 50/58 (86%)
 Frame = -3

Query: 178 TVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTL 5
           T  TLR+LCQ HVPEH++ RME+IGY+ PT++Q ++LP LFSGRDC+L AQTGSGKTL
Sbjct: 70  TTPTLRELCQAHVPEHILQRMEDIGYVMPTDIQREALPYLFSGRDCILHAQTGSGKTL 127


>ref|XP_006400479.1| hypothetical protein EUTSA_v10013438mg [Eutrema salsugineum]
           gi|557101569|gb|ESQ41932.1| hypothetical protein
           EUTSA_v10013438mg [Eutrema salsugineum]
          Length = 473

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 41/60 (68%), Positives = 51/60 (85%)
 Frame = -3

Query: 184 ENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTL 5
           E T  TLR +C+G VPEH+I RMEEIG++FPTN+Q ++LP LF+GRDC+L AQTGSGKTL
Sbjct: 69  ETTDLTLRNICEGFVPEHIIHRMEEIGFVFPTNIQREALPTLFTGRDCILHAQTGSGKTL 128


>ref|NP_974812.1| DEAD-box ATP-dependent RNA helicase 58 [Arabidopsis thaliana]
           gi|108861900|sp|Q3E9C3.1|RH58_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 58,
           chloroplastic; Flags: Precursor
           gi|332005287|gb|AED92670.1| DEAD-box ATP-dependent RNA
           helicase 58 [Arabidopsis thaliana]
          Length = 472

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 43/72 (59%), Positives = 57/72 (79%), Gaps = 6/72 (8%)
 Frame = -3

Query: 202 TEAENRENTVS------TLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDC 41
           T +E   N+V+      TLRQ+CQG VPEH++ RMEEIG++FPT++Q ++LP LF+GRDC
Sbjct: 57  TSSEIESNSVTETTVPLTLRQICQGFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDC 116

Query: 40  VLQAQTGSGKTL 5
           +L AQTGSGKTL
Sbjct: 117 ILHAQTGSGKTL 128


>ref|XP_006584069.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
           isoform X2 [Glycine max]
          Length = 442

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 41/60 (68%), Positives = 50/60 (83%)
 Frame = -3

Query: 184 ENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTL 5
           E T  TLR+LCQ HVPEH++ RMEEIGY+ PT++Q ++LP LFSG DC+L AQTGSGKTL
Sbjct: 66  EVTTPTLRELCQSHVPEHILQRMEEIGYVMPTDIQREALPYLFSGLDCILHAQTGSGKTL 125


>ref|XP_006290141.1| hypothetical protein CARUB_v10003807mg [Capsella rubella]
           gi|482558847|gb|EOA23039.1| hypothetical protein
           CARUB_v10003807mg [Capsella rubella]
          Length = 471

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 40/60 (66%), Positives = 51/60 (85%)
 Frame = -3

Query: 184 ENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTL 5
           E T  TLRQ+CQ  VPEH++ RMEEIG++FPT++Q ++LP LF+GRDC+L AQTGSGKTL
Sbjct: 68  ETTALTLRQICQAFVPEHILHRMEEIGFVFPTDIQREALPTLFTGRDCILHAQTGSGKTL 127


>ref|XP_003528676.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic
           isoform X1 [Glycine max]
          Length = 472

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 41/60 (68%), Positives = 50/60 (83%)
 Frame = -3

Query: 184 ENTVSTLRQLCQGHVPEHVICRMEEIGYLFPTNVQMQSLPLLFSGRDCVLQAQTGSGKTL 5
           E T  TLR+LCQ HVPEH++ RMEEIGY+ PT++Q ++LP LFSG DC+L AQTGSGKTL
Sbjct: 66  EVTTPTLRELCQSHVPEHILQRMEEIGYVMPTDIQREALPYLFSGLDCILHAQTGSGKTL 125