BLASTX nr result
ID: Catharanthus22_contig00028297
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00028297
(243 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containi... 104 1e-20
ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containi... 103 2e-20
ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containi... 103 3e-20
ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citr... 102 4e-20
ref|XP_002520572.1| pentatricopeptide repeat-containing protein,... 100 2e-19
ref|XP_003618091.1| Pentatricopeptide repeat-containing protein ... 98 1e-18
ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containi... 97 3e-18
emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera] 96 4e-18
ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Popu... 96 5e-18
gb|EOX93208.1| Tetratricopeptide repeat (TPR)-like superfamily p... 96 5e-18
gb|EOX93207.1| Tetratricopeptide repeat (TPR)-like superfamily p... 96 5e-18
ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Caps... 96 6e-18
gb|EMJ17708.1| hypothetical protein PRUPE_ppa025580mg, partial [... 95 8e-18
ref|XP_002883344.1| pentatricopeptide repeat-containing protein ... 93 4e-17
ref|NP_188854.1| pentatricopeptide repeat-containing protein [Ar... 92 5e-17
ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutr... 92 7e-17
gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis] 92 9e-17
ref|XP_006576131.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
>ref|XP_006481381.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Citrus sinensis]
Length = 833
Score = 104 bits (259), Expect = 1e-20
Identities = 46/80 (57%), Positives = 61/80 (76%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I A +F+ N S +RDQATWNAMI+GYT NGL+E++ FRQML+HNV P
Sbjct: 474 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 533
Query: 183 VTLSSILPASSQSGSLNLGK 242
VT++S+LPA + G++ LGK
Sbjct: 534 VTIASVLPACNPMGNIELGK 553
>ref|XP_006351208.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like, partial [Solanum tuberosum]
Length = 831
Score = 103 bits (258), Expect = 2e-20
Identities = 50/80 (62%), Positives = 62/80 (77%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KS MI A+ +F N +N++DQATWNAMI+G T NGLIEQS VFR+ML+ NV P
Sbjct: 474 MYAKSNMIREAQVIFQSNFTNDKDQATWNAMIAGNTQNGLIEQSFVVFREMLEQNVKPNA 533
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILP+ SQSGS+ +GK
Sbjct: 534 VTLASILPSCSQSGSIAIGK 553
>ref|XP_004250379.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Solanum lycopersicum]
Length = 835
Score = 103 bits (256), Expect = 3e-20
Identities = 49/80 (61%), Positives = 62/80 (77%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KS MI A+++F N +N++DQATWNAMI+G T NGLIEQS VF+ ML+ NV P
Sbjct: 476 MYAKSNMIREAQAIFQSNFTNDKDQATWNAMIAGNTQNGLIEQSFVVFKDMLEQNVKPNA 535
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILP+ SQSGS+ +GK
Sbjct: 536 VTLASILPSCSQSGSIAIGK 555
>ref|XP_006429784.1| hypothetical protein CICLE_v10011066mg [Citrus clementina]
gi|557531841|gb|ESR43024.1| hypothetical protein
CICLE_v10011066mg [Citrus clementina]
Length = 833
Score = 102 bits (255), Expect = 4e-20
Identities = 45/80 (56%), Positives = 60/80 (75%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I A +F+ N S +RDQATWNAMI+GYT NGL+E++ FRQML+HNV P
Sbjct: 474 MYAKSGLIKTARQIFEKNDSGDRDQATWNAMIAGYTQNGLLEEAFVAFRQMLEHNVTPNV 533
Query: 183 VTLSSILPASSQSGSLNLGK 242
VT++S+LPA + G++ GK
Sbjct: 534 VTIASVLPACNPMGNIEFGK 553
>ref|XP_002520572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540232|gb|EEF41805.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 695
Score = 100 bits (250), Expect = 2e-19
Identities = 48/80 (60%), Positives = 60/80 (75%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I ++ VF+ N NRDQATWNA+I+GYT NGL+EQ+ FR ML+ N+ P
Sbjct: 348 MYAKSGLIRISQRVFENNNIQNRDQATWNAVIAGYTQNGLVEQAFITFRLMLEQNLRPNA 407
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILPA S GS+NLGK
Sbjct: 408 VTLASILPACSSLGSINLGK 427
Score = 56.2 bits (134), Expect = 4e-06
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG I AESVF S+ R+ T+ MI GY +G+ E +L++F M + + P
Sbjct: 451 MYSKSGAINYAESVFTQ--SSERNSVTYTTMILGYGQHGMGENALSLFHSMKKSGIQPDA 508
Query: 183 VTLSSILPASSQSGSLNLG 239
+T ++L A S +G ++ G
Sbjct: 509 ITFVAVLSACSYAGLVDEG 527
>ref|XP_003618091.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519426|gb|AET01050.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 828
Score = 97.8 bits (242), Expect = 1e-18
Identities = 46/80 (57%), Positives = 60/80 (75%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG I AE +F+ NCS++RDQATWNA+I+GYT NGL E+++ + +QML NV P
Sbjct: 469 MYAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNA 528
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILPA S GS+ L +
Sbjct: 529 VTLASILPACSSMGSMGLAR 548
>ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 817
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I AA++VF+ + S+ RDQATWN+M+SGYT NGL++Q+ + RQML V P
Sbjct: 458 MYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNV 517
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILPA + SG ++ GK
Sbjct: 518 VTLASILPACNPSGYIDWGK 537
>ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic-like [Cucumis sativus]
Length = 793
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/80 (56%), Positives = 61/80 (76%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I AA++VF+ + S+ RDQATWN+M+SGYT NGL++Q+ + RQML V P
Sbjct: 434 MYAKSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNV 493
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILPA + SG ++ GK
Sbjct: 494 VTLASILPACNPSGYIDWGK 513
>ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Vitis vinifera]
Length = 825
Score = 96.7 bits (239), Expect = 3e-18
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I A+ +F+ N +RD+ATWNAMI+GYT NGL E+ VFR+M++ NV P
Sbjct: 466 MYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNA 525
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILPA + G++ LGK
Sbjct: 526 VTLASILPACNPMGTIGLGK 545
>emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
Length = 825
Score = 96.3 bits (238), Expect = 4e-18
Identities = 44/80 (55%), Positives = 59/80 (73%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I A+ +F+ N +RD+ATWNAMI+GYT NGL E+ VFR+M++ NV P
Sbjct: 466 MYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFRKMIEQNVRPNA 525
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILPA + G++ LGK
Sbjct: 526 VTLASILPACNPMGTIGLGK 545
>ref|XP_002308773.2| hypothetical protein POPTR_0006s00960g [Populus trichocarpa]
gi|550335185|gb|EEE92296.2| hypothetical protein
POPTR_0006s00960g [Populus trichocarpa]
Length = 820
Score = 95.9 bits (237), Expect = 5e-18
Identities = 43/80 (53%), Positives = 61/80 (76%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY K G+I ++ +F+ + NNRDQATWNAMI+GYT +GL+E++ FRQML+ NV P
Sbjct: 471 MYAKCGLIRLSQRIFERSNVNNRDQATWNAMIAGYTQHGLVEEAFVTFRQMLEKNVMPNA 530
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL++ILPA + G+++LGK
Sbjct: 531 VTLATILPACNPVGNIDLGK 550
>gb|EOX93208.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2
[Theobroma cacao] gi|508701313|gb|EOX93209.1|
Tetratricopeptide repeat (TPR)-like superfamily protein
isoform 2 [Theobroma cacao]
Length = 732
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I ++ +F+ + S NRDQATWNAMI+G NGL+E+++ VF+QMLQ NV P
Sbjct: 389 MYAKSGLIRNSQLLFEKSNSCNRDQATWNAMIAGLAQNGLVEEAIIVFKQMLQQNVMPNA 448
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+S+LPA S G+++LGK
Sbjct: 449 VTLASVLPACSLMGNVDLGK 468
>gb|EOX93207.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
isoform 1 [Theobroma cacao]
Length = 923
Score = 95.9 bits (237), Expect = 5e-18
Identities = 45/80 (56%), Positives = 62/80 (77%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I ++ +F+ + S NRDQATWNAMI+G NGL+E+++ VF+QMLQ NV P
Sbjct: 580 MYAKSGLIRNSQLLFEKSNSCNRDQATWNAMIAGLAQNGLVEEAIIVFKQMLQQNVMPNA 639
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+S+LPA S G+++LGK
Sbjct: 640 VTLASVLPACSLMGNVDLGK 659
>ref|XP_006296991.1| hypothetical protein CARUB_v10012985mg [Capsella rubella]
gi|565478704|ref|XP_006296992.1| hypothetical protein
CARUB_v10012985mg [Capsella rubella]
gi|482565700|gb|EOA29889.1| hypothetical protein
CARUB_v10012985mg [Capsella rubella]
gi|482565701|gb|EOA29890.1| hypothetical protein
CARUB_v10012985mg [Capsella rubella]
Length = 824
Score = 95.5 bits (236), Expect = 6e-18
Identities = 44/80 (55%), Positives = 61/80 (76%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I ++ +F+ + RDQATWN++ISGYT NGL E++ VFR+ML+ N+ P
Sbjct: 466 MYAKSGLIMMSQKLFERSGYTERDQATWNSIISGYTQNGLTEETFVVFRKMLEQNIRPNA 525
Query: 183 VTLSSILPASSQSGSLNLGK 242
VT++SILPA SQ GS++LGK
Sbjct: 526 VTVASILPACSQIGSVDLGK 545
>gb|EMJ17708.1| hypothetical protein PRUPE_ppa025580mg, partial [Prunus persica]
Length = 804
Score = 95.1 bits (235), Expect = 8e-18
Identities = 43/80 (53%), Positives = 60/80 (75%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG + AE +F +++RDQATWN+MI+GYT NGL E++ VFRQML+ N+ P
Sbjct: 463 MYAKSGSVRIAERIFKTEYTHDRDQATWNSMIAGYTQNGLTEEAFVVFRQMLEQNLIPNA 522
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILPA + G++++GK
Sbjct: 523 VTLASILPACNPVGNIDMGK 542
>ref|XP_002883344.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297329184|gb|EFH59603.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 824
Score = 92.8 bits (229), Expect = 4e-17
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I ++ +F+ + RDQATWN+MISGYT NG E++ VFR+ML+ N+ P
Sbjct: 466 MYAKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEETFLVFRKMLEQNIRPNA 525
Query: 183 VTLSSILPASSQSGSLNLGK 242
VT++SILPA SQ GS++LGK
Sbjct: 526 VTVASILPACSQVGSVDLGK 545
>ref|NP_188854.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273371|sp|Q9LIE7.1|PP246_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g22150, chloroplastic; Flags: Precursor
gi|11994734|dbj|BAB03063.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|110739449|dbj|BAF01634.1| hypothetical protein
[Arabidopsis thaliana] gi|332643073|gb|AEE76594.1|
pentatricopeptide repeat-containing protein [Arabidopsis
thaliana]
Length = 820
Score = 92.4 bits (228), Expect = 5e-17
Identities = 44/80 (55%), Positives = 60/80 (75%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I ++ +F+ + RDQATWN+MISGYT NG E++ VFR+ML+ N+ P
Sbjct: 462 MYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNA 521
Query: 183 VTLSSILPASSQSGSLNLGK 242
VT++SILPA SQ GS++LGK
Sbjct: 522 VTVASILPACSQIGSVDLGK 541
>ref|XP_006406206.1| hypothetical protein EUTSA_v10020073mg [Eutrema salsugineum]
gi|557107352|gb|ESQ47659.1| hypothetical protein
EUTSA_v10020073mg [Eutrema salsugineum]
Length = 825
Score = 92.0 bits (227), Expect = 7e-17
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG+I ++ +F+ + RDQATWN+MISGY NG E++ VFR+ML+ N+ P
Sbjct: 466 MYAKSGLIRISQKLFERSGYAERDQATWNSMISGYAQNGHTEETFVVFRKMLEQNIRPNA 525
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILP SQ GS++LGK
Sbjct: 526 VTLASILPVCSQIGSIDLGK 545
>gb|EXB53573.1| hypothetical protein L484_009313 [Morus notabilis]
Length = 820
Score = 91.7 bits (226), Expect = 9e-17
Identities = 41/80 (51%), Positives = 62/80 (77%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KSG++GA + + + + +++RD ATWN++I+GYT NGLIE++ VFR ML+ + P +
Sbjct: 462 MYAKSGLVGALQIISEKSSTHDRDVATWNSVIAGYTQNGLIEEAFVVFRLMLEKKLLPNS 521
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILPA S G+++LGK
Sbjct: 522 VTLASILPACSPMGNIDLGK 541
>ref|XP_006576131.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
chloroplastic [Glycine max]
Length = 752
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/80 (48%), Positives = 55/80 (68%)
Frame = +3
Query: 3 MYFKSGMIGAAESVFDMNCSNNRDQATWNAMISGYTHNGLIEQSLTVFRQMLQHNVAPTT 182
MY KS ++ +E +F+ NC ++RD ATWNAMI+GYT NGL ++++ + R+ L H V P
Sbjct: 444 MYAKSRLVRTSELLFEQNCPSDRDLATWNAMIAGYTQNGLSDKAILILREALVHKVMPNA 503
Query: 183 VTLSSILPASSQSGSLNLGK 242
VTL+SILPA S GS +
Sbjct: 504 VTLASILPACSSMGSTTFAR 523