BLASTX nr result
ID: Catharanthus22_contig00028121
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00028121
(888 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 120 2e-27
ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein A... 115 3e-27
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas... 111 7e-26
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 104 9e-25
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 104 9e-25
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 104 9e-25
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 103 9e-25
ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624... 111 1e-24
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ... 114 5e-23
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 100 2e-22
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ... 94 5e-22
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript... 99 5e-22
gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao] 95 3e-21
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 93 4e-21
gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [... 107 6e-21
gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at t... 105 2e-20
ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313... 100 9e-19
ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291... 86 5e-18
ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756... 82 6e-18
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas... 95 9e-18
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 120 bits (300), Expect(2) = 2e-27
Identities = 72/198 (36%), Positives = 117/198 (59%), Gaps = 4/198 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P L+V+CME L+ ++ V G+W ++ SR GP +S+L F DDL+LF A+V QAQV+K
Sbjct: 647 PYLYVICMERLAHLIDQEVTNGNWKPVKASRNGPPISNLAFADDLILFSEASVEQAQVMK 706
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFP----MLV*TRVPPIL*VWYTTNTGIRYIFGHAPLHK 540
L FC+ VN KS++YF + + V L + T + G +Y+ G ++
Sbjct: 707 WCLDRFCEASGSKVNEDKSKIYFSANTHLDIRDAVCNTLAMEATADFG-KYL-GVPTING 764
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
R S+ Y +LV+++ KL+GWK +T+S+A + L+Q+ S I Y+MQ++ LP T +
Sbjct: 765 RSSKREYQYLVDRINGKLAGWKTKTLSIAGRATLIQSAFSSIPYYTMQSTKLPRSTCDDI 824
Query: 359 EKLIWSFFWGDSESHAKL 306
++ SF WG+ E ++
Sbjct: 825 DRKSRSFLWGEQEGKRRV 842
Score = 30.0 bits (66), Expect(2) = 2e-27
Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -1
Query: 294 KHICQPNDRRGLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY 160
++I + GLG++SM L + W L++ LW ++L AKY
Sbjct: 848 ENISKSKKEGGLGIRSMRQANSAFLVKLGWRLLAEPSSLWSRILRAKY 895
>ref|XP_006480844.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus
sinensis]
Length = 768
Score = 115 bits (288), Expect(2) = 3e-27
Identities = 74/198 (37%), Positives = 102/198 (51%), Gaps = 4/198 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P +FVLC+E LS + + W IRLSR+G LSHL+F DDLLLF A QAQ I
Sbjct: 71 PYIFVLCVERLSHGIYQSIHQDHWKPIRLSRLGTPLSHLFFTDDLLLFAEATSGQAQCIN 130
Query: 707 EIL*AFCQRLVQMVNMSKSQLYF----PMLV*TRVPPIL*VWYTTNTGIRYIFGHAPLHK 540
+L FC VN SK+ +YF P V TR+ L YT + G LH
Sbjct: 131 SVLGDFCLSSGTKVNQSKTHVYFSKNVPDAVATRIWRDL--GYTVTKDLGKYLGMPLLHS 188
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
RVSQ TY +++K KL GW +S+A + L Q+ + Y+MQT+ LP +
Sbjct: 189 RVSQQTYQGILDKTDQKLLGWAASQLSLAGRITLTQSVLQAVPIYAMQTTNLPGSIKTKL 248
Query: 359 EKLIWSFFWGDSESHAKL 306
+++ F W ++ K+
Sbjct: 249 DQICRRFLWSGNDELRKM 266
Score = 33.9 bits (76), Expect(2) = 3e-27
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = -1
Query: 291 HICQPNDRRGLGLKS---MMDIVLARSPWLFLSQRDCLWLQVLEAKYG 157
+ICQP GLG K M + +L + W +++ + L +QVL KYG
Sbjct: 273 NICQPKMAGGLGFKRLDIMNEALLLKVAWHLITEPNKLCVQVLSTKYG 320
>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
Polynucleotidyl transferase, Ribonuclease H fold
[Medicago truncatula]
Length = 729
Score = 111 bits (277), Expect(2) = 7e-26
Identities = 71/195 (36%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LFV+CME LS + V A W +R R GP +SHL F DDLLLF A++ QA +
Sbjct: 71 PYLFVICMERLSHIIADQVEADYWKPMRAGRYGPPISHLLFADDLLLFAEASIEQAHCVL 130
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPMLV*T--RVPPIL*VWYTTNTGIRYIFGHAPLHKRV 534
L FCQ Q +N K+Q+YF V R I + + G R
Sbjct: 131 HCLDMFCQSSGQKINREKTQVYFSKNVDNHLREDIIQHTGFNQVNSLGKYLGANITPGRT 190
Query: 533 SQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIVEK 354
S+G ++ ++ K++ KLSGWK Q +S+A + L + S I Y MQ + +P +EK
Sbjct: 191 SRGHFNHIINKIQNKLSGWKQQCLSLAGRITLSKFVISSIPYYHMQYAKIPKTICDEIEK 250
Query: 353 LIWSFFWGDSESHAK 309
+ F WGDS K
Sbjct: 251 IQRGFVWGDSNQGRK 265
Score = 33.5 bits (75), Expect(2) = 7e-26
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = -1
Query: 285 CQPNDRRGLGLKS---MMDIVLARSPWLFLSQRDCLWLQVLEAKYG 157
C P GLG K M + L + W + Q D LW +VL +KYG
Sbjct: 275 CLPKMNGGLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKYG 320
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 104 bits (259), Expect(2) = 9e-25
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LF L ME L+ + V A +W + ++R G +SHL+F DDL+LF A+ QAQ++
Sbjct: 1177 PYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMF 1236
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPMLV*T----RVPPIL*VWYTTNTGIRYIFGHAPLHK 540
+ L +F VN SKS L+ V + IL V + G G L +
Sbjct: 1237 DCLDSFSDASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGT--YLGIPMLKE 1294
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
RVS+ T++ +++K+R KLS WK +++MA + +LVQ + + Y+MQ LP+ T +
Sbjct: 1295 RVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEI 1354
Query: 359 EKLIWSFFWGDSESHAKL 306
+K +F WG + KL
Sbjct: 1355 DKTCRNFLWGHDTNTRKL 1372
Score = 36.6 bits (83), Expect(2) = 9e-25
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 288 ICQPNDRRGLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY 160
IC+P + GLGL+ D L + W S D LW++VL KY
Sbjct: 1380 ICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 1425
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 104 bits (259), Expect(2) = 9e-25
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LF L ME L+ + V A +W + ++R G +SHL+F DDL+LF A+ QAQ++
Sbjct: 645 PYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMF 704
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPMLV*T----RVPPIL*VWYTTNTGIRYIFGHAPLHK 540
+ L +F VN SKS L+ V + IL V + G G L +
Sbjct: 705 DCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGT--YLGIPMLKE 762
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
RVS+ T++ +++K+R KLS WK +++MA + +LVQ + + Y+MQ LP+ T +
Sbjct: 763 RVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEI 822
Query: 359 EKLIWSFFWGDSESHAKL 306
+K +F WG + KL
Sbjct: 823 DKTCRNFLWGHDTNTRKL 840
Score = 36.6 bits (83), Expect(2) = 9e-25
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 288 ICQPNDRRGLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY 160
IC+P + GLGL+ D L + W S D LW++VL KY
Sbjct: 848 ICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 893
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 104 bits (259), Expect(2) = 9e-25
Identities = 68/198 (34%), Positives = 106/198 (53%), Gaps = 4/198 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LF L ME L+ + V A +W + ++R G +SHL+F DDL+LF A+ QAQ++
Sbjct: 645 PYLFNLVMERLAHDIQTRVNARTWKPVHITRGGTGISHLFFADDLMLFGEASEHQAQIMF 704
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPMLV*T----RVPPIL*VWYTTNTGIRYIFGHAPLHK 540
+ L +F VN SKS L+ V + IL V + G G L +
Sbjct: 705 DCLDSFSNASGLKVNFSKSLLFCSSNVNAGLKRAIGSILQVPVAESLGT--YLGIPMLKE 762
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
RVS+ T++ +++K+R KLS WK +++MA + +LVQ + + Y+MQ LP+ T +
Sbjct: 763 RVSRNTFNAVIDKMRTKLSSWKASSLNMAGRRVLVQASLATVPTYTMQVMALPVSTCNEI 822
Query: 359 EKLIWSFFWGDSESHAKL 306
+K +F WG + KL
Sbjct: 823 DKTCRNFLWGHDTNTRKL 840
Score = 36.6 bits (83), Expect(2) = 9e-25
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Frame = -1
Query: 288 ICQPNDRRGLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY 160
IC+P + GLGL+ D L + W S D LW++VL KY
Sbjct: 848 ICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 893
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 103 bits (258), Expect(2) = 9e-25
Identities = 65/200 (32%), Positives = 111/200 (55%), Gaps = 7/200 (3%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LFVLC+E L + V W I +S G LSH+ F DDL+LF A+V+Q ++I+
Sbjct: 504 PYLFVLCLERLCHLIEASVGKREWKPIAVSCGGSKLSHVCFADDLILFAEASVAQIRIIR 563
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPMLV*TRVPPIL*VWYTTNTGI-------RYIFGHAP 549
+L FC+ Q V++ KS+++F V + ++ + +GI +Y+ G
Sbjct: 564 RVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLI----SEESGIGCTKELGKYL-GMPI 618
Query: 548 LHKRVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTL 369
L KR+++ T+ ++E+V +L+GWKG+++S+A + L + S I + M LLP+ TL
Sbjct: 619 LQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTL 678
Query: 368 KIVEKLIWSFFWGDSESHAK 309
+++ +F WG + K
Sbjct: 679 DTLDRYSRTFLWGSTMEKKK 698
Score = 37.0 bits (84), Expect(2) = 9e-25
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -1
Query: 294 KHICQPNDRRGLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY 160
+ IC+P G+GL+S D+ ++A+ W L ++ LW +V+ KY
Sbjct: 705 RKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKY 752
>ref|XP_006490008.1| PREDICTED: uncharacterized protein LOC102624085 [Citrus sinensis]
Length = 1635
Score = 111 bits (277), Expect(2) = 1e-24
Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 4/198 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P +FVLC+E LS ++ + G W IRL+R+G LSHL+F DDLL A+ QA +I
Sbjct: 1137 PYIFVLCIERLSHGISRSIQQGHWKPIRLARMGTPLSHLFFADDLLFLSEASSQQAIIIN 1196
Query: 707 EIL*AFCQRLVQMVNMSKSQLYF----PMLV*TRVPPIL*VWYTTNTGIRYIFGHAPLHK 540
+I+ F VN SK+ +YF + +R+ L T N G +Y+ G H
Sbjct: 1197 KIIDEFSASSGAKVNKSKTLVYFSANISAMEASRIGSDLGYSVTDNLG-KYL-GVPLCHS 1254
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
R+S+ TY +V+K+ +LSGW +++A + L Q+ I+ Y+MQT+ LP +
Sbjct: 1255 RISKQTYQSIVDKIDQRLSGWNASHLTLAGRITLAQSVLQAISVYAMQTTKLPRSIKMKI 1314
Query: 359 EKLIWSFFWGDSESHAKL 306
++L F W S H K+
Sbjct: 1315 DQLCRRFIWSGSAEHQKM 1332
Score = 29.3 bits (64), Expect(2) = 1e-24
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = -1
Query: 288 ICQPNDRRGLGLKS---MMDIVLARSPWLFLSQRDCLWLQVLEAKYG 157
IC P + GLG K M +L ++ W +++ L QVL KYG
Sbjct: 1340 ICTPKCKGGLGFKKLDIMNHALLMKNTWRLITEPTKLSNQVLLTKYG 1386
>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
Length = 799
Score = 114 bits (285), Expect = 5e-23
Identities = 69/199 (34%), Positives = 112/199 (56%), Gaps = 6/199 (3%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LFVLC+E L Q++ V W I +SR GP+LSH+ F DDL+LF A+V+Q +V++
Sbjct: 96 PYLFVLCLERLCHQIDLAVGTKEWKPISMSRGGPLLSHICFADDLILFAEASVAQIRVVR 155
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPMLV*TRVPPIL*VWYTTNTGIR------YIFGHAPL 546
++L FC Q V++ KS+++F V L + + +GI+ G L
Sbjct: 156 KVLEKFCIASGQKVSLEKSKIFFSQ----NVHRDLEKFISDESGIKSTKELGKYLGMPVL 211
Query: 545 HKRVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLK 366
KR+++ T+ ++ +V +L+GWKG+ +S+A + L ++ S I ++M T LP TL
Sbjct: 212 QKRINKDTFGEILLRVSSRLAGWKGRMLSLAGRLTLTKSVLSSIPIHTMSTIALPKATLD 271
Query: 365 IVEKLIWSFFWGDSESHAK 309
+++ SF WG S K
Sbjct: 272 GFDRISKSFVWGSSTEKKK 290
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 100 bits (248), Expect(2) = 2e-22
Identities = 65/192 (33%), Positives = 107/192 (55%), Gaps = 6/192 (3%)
Frame = -2
Query: 863 EVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIKEIL*AFCQ 684
E L ++ VA W I LS+ GP +SH+ F DDL+LF A+VSQ +VI+ IL FC
Sbjct: 326 ERLCHMIDRAVAVKEWKSIGLSQGGPKISHICFADDLILFAEASVSQIRVIRRILETFCI 385
Query: 683 RLVQMVNMSKSQLYFPMLV*TRVPPIL*VWYTTNTGIR------YIFGHAPLHKRVSQGT 522
Q V++ KS+++F V + ++ + +GI+ G L +R+++ T
Sbjct: 386 ASGQKVSLDKSKIFFSKNVSRDLEKLI----SKESGIKSTRELGKYLGMPILQRRINKDT 441
Query: 521 YHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIVEKLIWS 342
+ ++E+V +L+GWKG+++S A + L ++ S+I ++M T LP TL+ ++KL
Sbjct: 442 FGEVLERVSSRLAGWKGRSLSFAGRLTLTKSVLSLIPIHTMSTISLPQSTLEGLDKLARV 501
Query: 341 FFWGDSESHAKL 306
F G S KL
Sbjct: 502 FLLGSSAEKKKL 513
Score = 33.1 bits (74), Expect(2) = 2e-22
Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 13/65 (20%)
Frame = -1
Query: 288 ICQPNDRRGLGL---KSMMDIVLARSPWLFLSQRDCLWLQVLEAKY----------GNIW 148
+C P GLG+ K M ++++ W ++ R LW ++L +KY G+ W
Sbjct: 521 VCLPKSEGGLGIRTSKCMNKALVSKVGWRLINDRYSLWARILRSKYRVGLREVVSRGSRW 580
Query: 147 EAGLG 133
G G
Sbjct: 581 VVGNG 585
>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268307|emb|CAB78601.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 929
Score = 94.0 bits (232), Expect(2) = 5e-22
Identities = 63/200 (31%), Positives = 105/200 (52%), Gaps = 7/200 (3%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LFVLC+E L Q+ V G W I +S+ GP +SH+ F DDL+LF A+V+
Sbjct: 456 PYLFVLCIERLCHQIETAVGRGDWKSISISQGGPKVSHVCFADDLILFAEASVA------ 509
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPMLV*TRVPPIL*VWYTTNTGI-------RYIFGHAP 549
Q V++ KS+++F V + ++ T TGI +Y+ G
Sbjct: 510 -----------QKVSLEKSKIFFSNNVSRDLEGLI----TAETGIGSTRELGKYL-GMPV 553
Query: 548 LHKRVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTL 369
L KR+++ T+ ++E+V +LSGWK +++S+A + L + I ++M + LLP L
Sbjct: 554 LQKRINKDTFGEVLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLL 613
Query: 368 KIVEKLIWSFFWGDSESHAK 309
+ ++K+ +F WG + K
Sbjct: 614 EQLDKVSRNFLWGSTVEKRK 633
Score = 37.7 bits (86), Expect(2) = 5e-22
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -1
Query: 294 KHICQPNDRRGLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY 160
K +C+P GLGL++ D+ +LA+ W L+ + LW +VL KY
Sbjct: 640 KKVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDKVSLWARVLRRKY 687
>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
thaliana]
Length = 732
Score = 99.0 bits (245), Expect(2) = 5e-22
Identities = 62/184 (33%), Positives = 105/184 (57%), Gaps = 7/184 (3%)
Frame = -2
Query: 839 YPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIKEIL*AFCQRLVQMVNM 660
+ +A W I LS+ GP LSH+ F DDL+LF A+V+Q +VI+ +L FC Q V++
Sbjct: 182 HSIARKDWKPISLSQGGPKLSHICFADDLILFAEASVAQIRVIRRVLERFCVASGQKVSL 241
Query: 659 SKSQLYFPMLV*TRVPPIL*VWYTTNTGI-------RYIFGHAPLHKRVSQGTYHFLVEK 501
KS+++F V + ++ + +GI +Y+ G L +R+++ T+ ++EK
Sbjct: 242 EKSKIFFSENVSRDLGKLI----SDESGISSTRELGKYL-GMPVLQRRINKDTFGDILEK 296
Query: 500 VR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIVEKLIWSFFWGDSE 321
+ +L+GWKG+ +S+A + L + S I ++M T LP TL ++K+ SF WG S
Sbjct: 297 LTTRLAGWKGRFLSLAGRVTLTKAVLSSIPVHTMSTIALPKSTLDGLDKVSRSFLWGSSV 356
Query: 320 SHAK 309
+ K
Sbjct: 357 TQRK 360
Score = 32.7 bits (73), Expect(2) = 5e-22
Identities = 12/48 (25%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -1
Query: 294 KHICQPNDRRGLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY 160
K +C+P GLG++ D+ +L++ W + LW +++ Y
Sbjct: 367 KRVCKPRSEGGLGIRKAQDMNKALLSKVGWRLIQDYHSLWARIMRCNY 414
>gb|EOY30506.1| Uncharacterized protein TCM_037692 [Theobroma cacao]
Length = 475
Score = 94.7 bits (234), Expect(2) = 3e-21
Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 5/192 (2%)
Frame = -2
Query: 878 FVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIKEIL 699
F LCM+ LS +N V G W IR R GP L HL+F DDL+LF A V + VIK +
Sbjct: 164 FFLCMQCLSHGINEAVTQGLWKPIRFGRGGPALPHLFFVDDLILFAEALVPRMDVIKGVS 223
Query: 698 *AFCQRLVQMVNMSKSQLYFP----MLV*TRVPPIL*VWYTTNTGIRYIFGHAPLHKRVS 531
F + + VN+ K+ YF M + + ++TN G +Y+ G L R
Sbjct: 224 NHFRKYSDEKVNVEKTSFYFSKNVGMDIIHAISECSGFSHSTNLG-KYL-GVPLLRGRKK 281
Query: 530 QGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIVEKL 351
+ +L EK+ +LS WK +S A + LV++ I +Y+MQT +P T + +E
Sbjct: 282 YSLFKYLEEKICNRLSSWKASALSFAGRLTLVKSILLYIPSYAMQTVAIPEKTREKIEMH 341
Query: 350 IWSFFW-GDSES 318
+F W GDS++
Sbjct: 342 CRNFLWDGDSKA 353
Score = 34.7 bits (78), Expect(2) = 3e-21
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Frame = -1
Query: 294 KHICQPNDRRGLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY--GNIWEA 142
K++C+P + GLG++ M + L ++ W +S LW++V +KY G W++
Sbjct: 362 KNMCRPKEEGGLGIRCMRKMNNAFLLKACWKLISTPASLWVKVARSKYNIGYQWKS 417
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 92.8 bits (229), Expect(2) = 4e-21
Identities = 63/188 (33%), Positives = 102/188 (54%), Gaps = 3/188 (1%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSR-IGPILSHLYFDDDLLLFRVANVSQAQVI 711
P +FVLCME LS ++ + GSW I++S +G +SH+++ DD+ LF A+V VI
Sbjct: 645 PYIFVLCMERLSMLISDRIRDGSWKPIKISSDLG--VSHIFYADDVFLFGQASVRNGGVI 702
Query: 710 KEIL*AFCQRLVQMVNMSKSQLYFPMLV*TRVPPIL*VWYTT--NTGIRYIFGHAPLHKR 537
+ +L F VNMSKS FP + + +L + T +T G L +
Sbjct: 703 QNVLEEFGNISGLRVNMSKSLAIFPPKMNPQRRRMLADFLTMKGSTSFGKYLGCNILPNK 762
Query: 536 VSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIVE 357
+ +G Y L+EKV+ ++GW+ + ++MA + L+++ S Y MQ+SLLP+ + +E
Sbjct: 763 LRRGDYDGLLEKVKSAINGWQAKYLNMAGRCTLIKSVVSSFPVYGMQSSLLPVSVMNEIE 822
Query: 356 KLIWSFFW 333
K F W
Sbjct: 823 KDCRKFLW 830
Score = 35.8 bits (81), Expect(2) = 4e-21
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = -1
Query: 288 ICQPNDRRGLGLKSMMD---IVLARSPWLFLSQRDCLWLQVLEAKYGNIWEAG 139
IC P + GLG + + + +A+ W+ + LW+++L+A+Y WE G
Sbjct: 847 ICSPTGKGGLGFRRLHNWNLAFMAKLGWMIIKDETKLWVRILKARY---WERG 896
>gb|EMJ13914.1| hypothetical protein PRUPE_ppa018769mg, partial [Prunus persica]
Length = 387
Score = 107 bits (267), Expect = 6e-21
Identities = 69/198 (34%), Positives = 110/198 (55%), Gaps = 4/198 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P VLC+E LS + V W ++ S GP +SHL+F DDL+LF A+ QAQ+++
Sbjct: 16 PYPSVLCIEKLSHIIFDEVGKKRWKCVKSSHSGPCVSHLFFADDLVLFAEASTKQAQIMR 75
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPM----LV*TRVPPIL*VWYTTNTGIRYIFGHAPLHK 540
+ L FC Q VN KS ++ ++ + I T N G Y+ G LH
Sbjct: 76 DCLEKFCSVSGQAVNFDKSAIFCSPNTGNVLAQDLSRICGSPLTANLG-NYL-GMPILHN 133
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
+V + TY LV KV+ L+ WK + +S+A + L+Q+ +S I Y+MQT+ LP+ +
Sbjct: 134 KVCKDTYGGLVNKVQNCLTLWKSKHLSLAGRATLIQSVTSSIPVYTMQTAKLPVSVCNAL 193
Query: 359 EKLIWSFFWGDSESHAKL 306
+++ +FFWG +E++ K+
Sbjct: 194 DRINCNFFWGGTENNHKI 211
>gb|EOY02376.1| LINE-type retrotransposon LIb DNA, Insertion at the S11 site-like
protein [Theobroma cacao]
Length = 620
Score = 105 bits (262), Expect = 2e-20
Identities = 73/195 (37%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LFVLC+E L+ + V W IRL + GP L++L+F DDL+L A+ SQ +VIK
Sbjct: 218 PYLFVLCIEKLAHGIKQAVEQEMWKPIRLGKHGPPLTYLFFMDDLILLAEASESQMEVIK 277
Query: 707 EIL*AFCQRLVQMVNMSKSQLY----FPMLV*TRVPPIL*VWYTTNTGIRYIFGHAPLHK 540
+L FC L V ++KS + PM + +V Y+ + G +YI G LH
Sbjct: 278 GVLEDFCACLRGKVCIAKSTFFCSKNVPMELNIKVKDCSGFSYSDSMG-KYI-GVPLLHG 335
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
R + Y L++KVR +L WK ++S + LVQ+ + I Y+MQT +PL K +
Sbjct: 336 RKTAHIYKSLIDKVRSRLCAWKASSLSSTGRLTLVQSVLTSIPLYTMQTISIPLEICKKI 395
Query: 359 EKLIWSFFW-GDSES 318
E L +F W GD +S
Sbjct: 396 ELLCRNFLWHGDGQS 410
>ref|XP_004301578.1| PREDICTED: uncharacterized protein LOC101313223 [Fragaria vesca
subsp. vesca]
Length = 543
Score = 100 bits (248), Expect = 9e-19
Identities = 63/188 (33%), Positives = 100/188 (53%), Gaps = 2/188 (1%)
Frame = -2
Query: 863 EVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIKEIL*AFCQ 684
++LS ++ V G W + S+ GP +SHL+F DDL+LF A QA +K L FC
Sbjct: 224 KMLSDLIHSAVEYGHWKSVNASQSGPRISHLFFVDDLMLFAEATEHQAYGLKTCLDNFCA 283
Query: 683 RLVQMVNMSKSQLYF-PMLV*TRVPPIL*VWYTTNTG-IRYIFGHAPLHKRVSQGTYHFL 510
Q+++ KS ++ P T I + T + G +H RV++ TY +
Sbjct: 284 ISGQIISYEKSLIFCSPNTTKTMASSISATCGSPLTSDLGKYLGMPLIHSRVNKHTYDAI 343
Query: 509 VEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIVEKLIWSFFWG 330
KV+ +LS WK + ++MA + L+Q+ +S I NY+MQT+ P+ ++KL +F WG
Sbjct: 344 FYKVQSRLSSWKSKVLNMAGRLTLIQSVTSAIPNYAMQTTKFPVSLCDRLDKLNRNFLWG 403
Query: 329 DSESHAKL 306
D + KL
Sbjct: 404 DVDDKKKL 411
>ref|XP_004292011.1| PREDICTED: uncharacterized protein LOC101291306 [Fragaria vesca
subsp. vesca]
Length = 948
Score = 86.3 bits (212), Expect(2) = 5e-18
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 4/198 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LF++ E LS +L V GI+L R P LSHL+F DD L F A +S +
Sbjct: 294 PYLFLIVSEALSLRLTKAVNEKHLLGIKLCRGCPTLSHLFFADDALFFVKATLSNVSKLA 353
Query: 707 EIL*AFCQRLVQMVNMSKSQLYF----PMLV*TRVPPIL*VWYTTNTGIRYIFGHAPLHK 540
I +C+ Q+++ KS ++F P + + ++ N G +Y+ G +
Sbjct: 354 AIFEEYCRASGQVISREKSSIFFSPNTPAQMARLMCELMGFVEVENPG-KYL-GLPTIWG 411
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
R+ + ++ E++ KL GWK + +S A + L+++ + +I ++ M LLP + +
Sbjct: 412 RLKKDALSYITERINRKLDGWKEKNLSWAGKETLIKSVAMVIPSFPMSCFLLPKYLGNQI 471
Query: 359 EKLIWSFFWGDSESHAKL 306
I +F+WG SES K+
Sbjct: 472 NSAISNFWWGKSESINKI 489
Score = 32.0 bits (71), Expect(2) = 5e-18
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 6/51 (11%)
Frame = -1
Query: 264 GLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY---GNIWEAGLGN 130
GLG K + +LA+ W LSQ + +W VL+A+Y EAG G+
Sbjct: 505 GLGFKDLHHFNLALLAKQCWRILSQPNSMWAMVLKARYFPNTGFMEAGKGH 555
>ref|XP_004954924.1| PREDICTED: uncharacterized protein LOC101756955 [Setaria italica]
Length = 1203
Score = 81.6 bits (200), Expect(3) = 6e-18
Identities = 52/198 (26%), Positives = 97/198 (48%), Gaps = 4/198 (2%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LF++ E LS + G G+++ R P +SHL F DD L+ A+ + A +
Sbjct: 507 PYLFLMVAEGLSCMIRKAEERGDLIGVKVCRDAPTISHLLFADDSLILMQADKNNADCLA 566
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPMLV*----TRVPPIL*VWYTTNTGIRYIFGHAPLHK 540
IL +C Q ++ +KS +YF T V IL + T + +Y+ G L
Sbjct: 567 SILNRYCASSGQKISEAKSSIYFSANTEADQKTEVCQILNIM-TESLNDKYL-GLPALVG 624
Query: 539 RVSQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIV 360
+ L+++V +++GWK +T+S+ + +L+++ + + Y+M +P K +
Sbjct: 625 LDRSNCFRHLIDRVNTRINGWKEKTLSLGGKEILIKSIAQAVPVYAMMVFQIPKSICKGI 684
Query: 359 EKLIWSFFWGDSESHAKL 306
I ++WGD + H ++
Sbjct: 685 TNAISQYWWGDDDEHRRM 702
Score = 32.0 bits (71), Expect(3) = 6e-18
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -1
Query: 288 ICQPNDRRGLGLKSMMDI---VLARSPWLFLSQRDCLWLQVLEAKY 160
+C P D+ G+G + + +LA+ W L + + L +VL A+Y
Sbjct: 710 MCLPKDKGGMGFRDLQSFNLAMLAKQAWRLLCEPESLCARVLRARY 755
Score = 24.3 bits (51), Expect(3) = 6e-18
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -3
Query: 88 GLQISKNGLAWEVGDAEFIKLLAD 17
GL+ K+G W VGD I + D
Sbjct: 780 GLECFKHGYIWRVGDGTQINIWED 803
>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
truncatula]
Length = 653
Score = 94.7 bits (234), Expect(2) = 9e-18
Identities = 54/188 (28%), Positives = 98/188 (52%), Gaps = 2/188 (1%)
Frame = -2
Query: 887 PLLFVLCMEVLSQQLNYPVAAGSW*GIRLSRIGPILSHLYFDDDLLLFRVANVSQAQVIK 708
P LF+LC E +S + G+++ + P +SHL F DD LF AN ++ + +K
Sbjct: 233 PYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFRANENETRALK 292
Query: 707 EIL*AFCQRLVQMVNMSKSQLYFPMLV*TRVPPIL--*VWYTTNTGIRYIFGHAPLHKRV 534
+IL + Q++NM KS++YF V L +W + GIR G + R
Sbjct: 293 DILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRS 352
Query: 533 SQGTYHFLVEKVR*KLSGWKGQTMSMATQTLLVQTPSSMIANYSMQTSLLPLHTLKIVEK 354
+ ++++ +++ ++SG + +S A + +L+++ + I +Y M LLP +EK
Sbjct: 353 KKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEK 412
Query: 353 LIWSFFWG 330
++ SF+WG
Sbjct: 413 MLNSFWWG 420
Score = 22.7 bits (47), Expect(2) = 9e-18
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = -1
Query: 264 GLGLKSMMDIVLARSP---WLFLSQRDCLWLQVLEAKY---GNIWEAGLGN 130
G+G + + LA S W FL+ D + ++ +AKY N A LG+
Sbjct: 445 GMGFRHIHGFDLAMSGKQCWNFLTNPDAMVSRIFKAKYFTNENFLGASLGH 495