BLASTX nr result
ID: Catharanthus22_contig00028038
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00028038
(627 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661... 81 3e-13
ref|XP_006397294.1| hypothetical protein EUTSA_v10029485mg [Eutr... 70 6e-10
gb|EPS61553.1| hypothetical protein M569_13243, partial [Genlise... 68 2e-09
gb|AAT40486.1| putative polyprotein [Solanum demissum] 68 2e-09
ref|XP_006403356.1| hypothetical protein EUTSA_v10003354mg [Eutr... 68 2e-09
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t... 67 4e-09
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 67 5e-09
emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera] 65 1e-08
ref|XP_006299524.1| hypothetical protein CARUB_v10015696mg, part... 65 2e-08
gb|AAF79663.1|AC022314_4 F9C16.10 [Arabidopsis thaliana] 65 2e-08
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 64 3e-08
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 64 3e-08
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 64 3e-08
emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera] 64 4e-08
ref|XP_006419113.1| hypothetical protein EUTSA_v10002979mg [Eutr... 64 5e-08
ref|XP_006393235.1| hypothetical protein EUTSA_v10011978mg [Eutr... 62 1e-07
ref|XP_006392205.1| hypothetical protein EUTSA_v10023972mg, part... 62 2e-07
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab... 62 2e-07
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 62 2e-07
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 62 2e-07
>ref|XP_006586558.1| PREDICTED: uncharacterized protein LOC102661920 [Glycine max]
Length = 516
Score = 80.9 bits (198), Expect = 3e-13
Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Frame = -3
Query: 253 HIQKEA--YNL-ASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKS 83
H++K+ Y+L +SD+P I+TQVQL +NYDEW + +R +LRA++K F++GSI KP
Sbjct: 23 HLKKQISPYDLYSSDNPGNIITQVQLKGENYDEWARAVRGSLRARRKFRFVDGSIKKPDD 82
Query: 82 GTVEEEDWLTMNIMVGS*ILNNIEPNL 2
E +DW T+N M+ S I N IEP L
Sbjct: 83 AAPEIDDWWTVNSMIVSWIFNTIEPKL 109
>ref|XP_006397294.1| hypothetical protein EUTSA_v10029485mg [Eutrema salsugineum]
gi|557098311|gb|ESQ38747.1| hypothetical protein
EUTSA_v10029485mg [Eutrema salsugineum]
Length = 196
Score = 69.7 bits (169), Expect = 6e-10
Identities = 35/74 (47%), Positives = 51/74 (68%)
Frame = -3
Query: 223 SDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWLTMNI 44
SD P ++T +QL +NY++W K +R ALR K+KLGF+EG++PKP + E E W +N
Sbjct: 6 SDRPGDLITTMQLRGENYEDWAKHVRNALRTKRKLGFIEGTLPKP-TAPKELEQWEVVNS 64
Query: 43 MVGS*ILNNIEPNL 2
M+ + I+N IE NL
Sbjct: 65 MLVAWIMNTIESNL 78
>gb|EPS61553.1| hypothetical protein M569_13243, partial [Genlisea aurea]
Length = 131
Score = 68.2 bits (165), Expect = 2e-09
Identities = 34/76 (44%), Positives = 49/76 (64%)
Frame = -3
Query: 229 LASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWLTM 50
L D P L+LT +QL +NYDEW K MR LRAKKK GF++G+I + + + + W +
Sbjct: 21 LPGDHPGLLLTTIQLRGENYDEWAKAMRAGLRAKKKYGFVDGTITE-RPPEISVDLWEQV 79
Query: 49 NIMVGS*ILNNIEPNL 2
N M+ + I+N +EP L
Sbjct: 80 NSMLVAWIINTVEPGL 95
>gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 68.2 bits (165), Expect = 2e-09
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = -3
Query: 229 LASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWLTM 50
L++D + +T V L NY+EW K MR A RAKKKLGF++G I +PK E +DW +
Sbjct: 11 LSADHTGICITPVVLKGYNYEEWAKAMRNAFRAKKKLGFIDGLITQPKEEGFELDDWYAV 70
Query: 49 NIMVGS*ILNNIEPNL 2
N M+ + N I+P+L
Sbjct: 71 NSMLIVWVFNTIDPSL 86
>ref|XP_006403356.1| hypothetical protein EUTSA_v10003354mg [Eutrema salsugineum]
gi|557104469|gb|ESQ44809.1| hypothetical protein
EUTSA_v10003354mg [Eutrema salsugineum]
Length = 198
Score = 67.8 bits (164), Expect = 2e-09
Identities = 40/92 (43%), Positives = 54/92 (58%)
Frame = -3
Query: 277 SKTMNDNDHIQKEAYNLASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSI 98
S +M N+ + Y SD P ++T VQL +NY++W K +R ALR K+KLGF+EG++
Sbjct: 21 SGSMTTNEVMLSPFYLHPSDRPGDLITTVQLRGENYEDWAKHVRNALRTKRKLGFIEGTV 80
Query: 97 PKPKSGTVEEEDWLTMNIMVGS*ILNNIEPNL 2
KP + T E E W MNI IEPNL
Sbjct: 81 KKP-TATKELEQWEIMNI---------IEPNL 102
>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 370
Score = 67.0 bits (162), Expect = 4e-09
Identities = 35/84 (41%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Frame = -3
Query: 250 IQKEAYNLA-SDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTV 74
+ + Y L+ SD+P ++T V L DNY+EW + M AL+AK+K GF++G+I KP S +
Sbjct: 25 VVQSPYTLSNSDNPGTLITSVVLNGDNYNEWSEEMLNALQAKRKTGFIDGTIQKPASDSP 84
Query: 73 EEEDWLTMNIMVGS*ILNNIEPNL 2
+ E+W T+N M+ I +IEP +
Sbjct: 85 DFENWKTVNSMIVGWIRVSIEPKV 108
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 66.6 bits (161), Expect = 5e-09
Identities = 33/86 (38%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = -3
Query: 256 DHIQKEAYNLAS-DSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSG 80
D + Y LAS D+P +++ V+L DNY++W M AL+AK+K GF+ G+IP+P
Sbjct: 25 DSLMVSPYTLASSDNPGAVISSVELNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPN 84
Query: 79 TVEEEDWLTMNIMVGS*ILNNIEPNL 2
E+W +N M+ I +IEP +
Sbjct: 85 DPNYENWTAVNSMIVGWIRTSIEPKV 110
>emb|CAN83378.1| hypothetical protein VITISV_011333 [Vitis vinifera]
Length = 758
Score = 65.5 bits (158), Expect = 1e-08
Identities = 33/75 (44%), Positives = 50/75 (66%)
Frame = -3
Query: 226 ASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWLTMN 47
++++P I+TQVQL DNYDEW + + L A+K GF++GSI + + + + EDW T+N
Sbjct: 9 SNNNPANIITQVQLKCDNYDEWARAVHTILLAEKIYGFVDGSIKQLDNDSSKLEDWWTVN 68
Query: 46 IMVGS*ILNNIEPNL 2
M+ S + N IEP L
Sbjct: 69 SMLVSWLFNTIEPIL 83
>ref|XP_006299524.1| hypothetical protein CARUB_v10015696mg, partial [Capsella rubella]
gi|482568233|gb|EOA32422.1| hypothetical protein
CARUB_v10015696mg, partial [Capsella rubella]
Length = 322
Score = 65.1 bits (157), Expect = 2e-08
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Frame = -3
Query: 265 NDNDHIQKEAYNLAS-DSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKP 89
+++ + AY LA+ ++P I+ V DN+DEW + +R ALR KKK GF++GS+ +P
Sbjct: 9 SESSRVMSAAYQLAANENPGAIIAHVHFNGDNFDEWAQTVRTALRVKKKFGFVDGSVTEP 68
Query: 88 KSGTVEEEDWLTMNIM 41
E EDW++ M
Sbjct: 69 NKEEAEYEDWVSAKSM 84
>gb|AAF79663.1|AC022314_4 F9C16.10 [Arabidopsis thaliana]
Length = 238
Score = 64.7 bits (156), Expect = 2e-08
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = -3
Query: 274 KTMNDNDHIQKE---AYNLA-SDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFME 107
K++ ++Q+ +Y+L SD+P +++Q L + NYD+W +RLAL+A+KK GF +
Sbjct: 139 KSLTRFSYVQRRTISSYDLTHSDNPGTLISQPLLPRPNYDKWSINIRLALQAQKKFGFAD 198
Query: 106 GSIPKPKSGTVEEEDWLTMNIMVGS 32
GSIPKP + + EDW N +V S
Sbjct: 199 GSIPKPDDDSEDYEDWCANNALVVS 223
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 64.3 bits (155), Expect = 3e-08
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = -3
Query: 265 NDNDHIQKEAYNL-ASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKP 89
++ D I Y L SD PH +LT + L +NY+ W K+ R L+AK+KLGF++G++ KP
Sbjct: 15 SEKDAISASPYYLHPSDHPHHVLTPMLLNGENYERWAKLTRNNLQAKQKLGFIDGTLTKP 74
Query: 88 KSGTVEEEDWLTMNIMVGS*ILNNIEPNL 2
S + + WL N M+ + +++P +
Sbjct: 75 SSDSPDYPRWLQTNSMLVGWLYASLDPQV 103
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 64.3 bits (155), Expect = 3e-08
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 KTMNDNDHIQKEAYNLAS-DSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSI 98
+T D + Y LAS D+P +++ V L DNY+EW M AL+AK+K GF+ GSI
Sbjct: 14 RTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTEMLNALQAKRKTGFINGSI 73
Query: 97 PKPKSGTVEEEDWLTMNIMVGS*ILNNIEPNL 2
KP + E+W +N M+ I +IEP +
Sbjct: 74 SKPPLDNPDYENWQAVNSMIVGWIRASIEPKV 105
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 64.3 bits (155), Expect = 3e-08
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = -3
Query: 274 KTMNDNDHIQKEAYNLAS-DSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSI 98
+T D + Y LAS D+P +++ V L DNY+EW M AL+AK+K GF+ GSI
Sbjct: 14 RTNQQPDVTKVSPYTLASSDNPGAMISSVMLTGDNYNEWSTKMLNALQAKRKTGFINGSI 73
Query: 97 PKPKSGTVEEEDWLTMNIMVGS*ILNNIEPNL 2
KP + E+W +N M+ I +IEP +
Sbjct: 74 SKPPLDNPDYENWQAVNSMIVGWIRASIEPKV 105
>emb|CAN65229.1| hypothetical protein VITISV_011708 [Vitis vinifera]
Length = 1149
Score = 63.9 bits (154), Expect = 4e-08
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = -3
Query: 226 ASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWLTMN 47
++D+ I+TQVQL +NYDEW + M ALRAKKK GF +G I +P E E+W T+N
Sbjct: 19 SNDNSGNIITQVQLRGENYDEWARAMWTALRAKKKYGFXDGXIKQPVENAQEIENWWTIN 78
Query: 46 IM 41
M
Sbjct: 79 SM 80
>ref|XP_006419113.1| hypothetical protein EUTSA_v10002979mg [Eutrema salsugineum]
gi|557097041|gb|ESQ37549.1| hypothetical protein
EUTSA_v10002979mg [Eutrema salsugineum]
Length = 103
Score = 63.5 bits (153), Expect = 5e-08
Identities = 30/68 (44%), Positives = 47/68 (69%)
Frame = -3
Query: 205 ILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWLTMNIMVGS*I 26
++ VQL +NY++W K +R ALR K+KLGF++G + KP++ E E W+ +N M+ + I
Sbjct: 1 MIITVQLRGENYEDWAKHVRNALRTKRKLGFVDGMLQKPET-EAEIEQWVVVNFMLVAWI 59
Query: 25 LNNIEPNL 2
+N IEP L
Sbjct: 60 MNTIEPTL 67
>ref|XP_006393235.1| hypothetical protein EUTSA_v10011978mg [Eutrema salsugineum]
gi|557089813|gb|ESQ30521.1| hypothetical protein
EUTSA_v10011978mg [Eutrema salsugineum]
Length = 147
Score = 62.4 bits (150), Expect = 1e-07
Identities = 25/71 (35%), Positives = 44/71 (61%)
Frame = -3
Query: 226 ASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWLTMN 47
A+++P I+ V DN+ EW + +R+ ++ KKK GF++G++ KPK E EDW+ +
Sbjct: 23 ANENPGAIIAHVHFNGDNFAEWAQAIRMTMKVKKKYGFVDGTVVKPKEDATEYEDWIMES 82
Query: 46 IMVGS*ILNNI 14
I + L+N+
Sbjct: 83 IAISPLFLDNL 93
>ref|XP_006392205.1| hypothetical protein EUTSA_v10023972mg, partial [Eutrema
salsugineum] gi|557088711|gb|ESQ29491.1| hypothetical
protein EUTSA_v10023972mg, partial [Eutrema salsugineum]
Length = 198
Score = 61.6 bits (148), Expect = 2e-07
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = -3
Query: 235 YNLASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWL 56
Y +SD PH +LT + L DNY+ W K+ R L AK KLGF++GS+ KP + + + + W+
Sbjct: 20 YLSSSDHPHHVLTPMLLNGDNYEMWAKLARNNLVAKHKLGFIDGSLSKPSAESNDYQRWI 79
Query: 55 TMNIMVGS*ILNNIEPNL 2
N M+ + +++P +
Sbjct: 80 QTNSMLVGWLYASLDPKV 97
>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
Length = 1486
Score = 61.6 bits (148), Expect = 2e-07
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Frame = -3
Query: 235 YNLAS-DSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDW 59
Y+L S D+P ++++ L NYDEW +RLAL+A+KK GF +GSIP+P + EDW
Sbjct: 25 YDLTSGDNPGTLISKPLLRGPNYDEWATNLRLALKARKKFGFADGSIPQPVETDPDFEDW 84
Query: 58 LTMNIMVGS 32
N +V S
Sbjct: 85 TANNALVVS 93
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 61.6 bits (148), Expect = 2e-07
Identities = 28/75 (37%), Positives = 49/75 (65%)
Frame = -3
Query: 226 ASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWLTMN 47
A+D+ +++ L +NY+EW + ALR++KK GF++G+IP+P G+ + EDWLT+N
Sbjct: 25 AADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDWLTIN 84
Query: 46 IMVGS*ILNNIEPNL 2
++ S + I+ L
Sbjct: 85 ALLVSWMKMTIDSEL 99
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 61.6 bits (148), Expect = 2e-07
Identities = 28/75 (37%), Positives = 49/75 (65%)
Frame = -3
Query: 226 ASDSPHLILTQVQLIKDNYDEWVKIMRLALRAKKKLGFMEGSIPKPKSGTVEEEDWLTMN 47
A+D+ +++ L +NY+EW + ALR++KK GF++G+IP+P G+ + EDWLT+N
Sbjct: 25 AADNSGAVISHPILKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDWLTIN 84
Query: 46 IMVGS*ILNNIEPNL 2
++ S + I+ L
Sbjct: 85 ALLVSWMKMTIDSEL 99