BLASTX nr result

ID: Catharanthus22_contig00028004 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00028004
         (306 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW77571.1| AP2-domain DNA-binding protein ORCA3 [Catharanthu...    77   2e-12
gb|ABU40945.1| AP2-domain DNA-binding protein [Datura metel]           77   2e-12
emb|CAB96899.1| AP2-domain DNA-binding protein [Catharanthus ros...    77   2e-12

>gb|ABW77571.1| AP2-domain DNA-binding protein ORCA3 [Catharanthus roseus]
          Length = 200

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 43/69 (62%), Positives = 44/69 (63%)
 Frame = +1

Query: 100 MSEEIISVSDRFLLSLIXXXXXXXXXXXXXXXXXXXXXXXXXIFADFLNWSGSEIQKRGS 279
           MSEEIISVSDRFLLSLI                         IFADFLNWSGSEIQKRGS
Sbjct: 1   MSEEIISVSDRFLLSLIEEHLLSDNSDDSSSELTSTEENWEEIFADFLNWSGSEIQKRGS 60

Query: 280 PSSESCQSH 306
           PSSESCQS+
Sbjct: 61  PSSESCQSN 69


>gb|ABU40945.1| AP2-domain DNA-binding protein [Datura metel]
          Length = 203

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 43/69 (62%), Positives = 44/69 (63%)
 Frame = +1

Query: 100 MSEEIISVSDRFLLSLIXXXXXXXXXXXXXXXXXXXXXXXXXIFADFLNWSGSEIQKRGS 279
           MSEEIISVSDRFLLSLI                         IFADFLNWSGSEIQKRGS
Sbjct: 1   MSEEIISVSDRFLLSLIEEHLLSDNSDDSGSELTSTEENWEEIFADFLNWSGSEIQKRGS 60

Query: 280 PSSESCQSH 306
           PSSESCQS+
Sbjct: 61  PSSESCQSN 69


>emb|CAB96899.1| AP2-domain DNA-binding protein [Catharanthus roseus]
           gi|8980315|emb|CAB96900.1| AP2-domain DNA-binding
           protein [Catharanthus roseus]
          Length = 203

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 43/69 (62%), Positives = 44/69 (63%)
 Frame = +1

Query: 100 MSEEIISVSDRFLLSLIXXXXXXXXXXXXXXXXXXXXXXXXXIFADFLNWSGSEIQKRGS 279
           MSEEIISVSDRFLLSLI                         IFADFLNWSGSEIQKRGS
Sbjct: 1   MSEEIISVSDRFLLSLIEEHLLSDNSDDSSSELTSTEENWEEIFADFLNWSGSEIQKRGS 60

Query: 280 PSSESCQSH 306
           PSSESCQS+
Sbjct: 61  PSSESCQSN 69


Top