BLASTX nr result
ID: Catharanthus22_contig00027903
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00027903
(340 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Sh... 78 1e-12
ref|XP_006843118.1| hypothetical protein AMTR_s00140p00093980 [A... 70 2e-10
ref|XP_006843120.1| hypothetical protein AMTR_s00140p00096690 [A... 68 1e-09
ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Sela... 60 3e-07
pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimi... 60 4e-07
gb|AAL05053.1|AF410953_1 antimicrobial peptide 2 [Pinus sylvestr... 60 4e-07
gb|AAL05054.1|AF410954_1 antimicrobial peptide 3 [Pinus sylvestris] 60 4e-07
sp|P83880.2|AMP1_PINMO RecName: Full=Antimicrobial peptide 1; Al... 59 5e-07
gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster] 59 5e-07
gb|AAL05052.1|AF410952_1 antimicrobial peptide 1 [Pinus sylvestris] 57 2e-06
ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Sela... 57 3e-06
ref|XP_002981964.1| hypothetical protein SELMODRAFT_421330 [Sela... 57 3e-06
ref|XP_002981963.1| hypothetical protein SELMODRAFT_115572 [Sela... 57 3e-06
tpg|DAA36327.1| TPA: hypothetical protein ZEAMMB73_042822 [Zea m... 56 6e-06
gb|AFK93075.1| anti-microbial protein [Pinus monticola] 56 6e-06
gb|ABR16715.1| unknown [Picea sitchensis] 55 7e-06
ref|XP_002446987.1| hypothetical protein SORBIDRAFT_06g026400 [S... 55 1e-05
gb|ABK21585.1| unknown [Picea sitchensis] gi|116790086|gb|ABK254... 55 1e-05
>sp|P80915.1|AMP1_MACIN RecName: Full=Antimicrobial peptide 1; Short=AMP1; AltName:
Full=MiAMP1; Flags: Precursor gi|2181943|emb|CAA71842.1|
AMP1 [Macadamia integrifolia]
Length = 102
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/91 (42%), Positives = 53/91 (58%)
Frame = -1
Query: 274 MASTKNLLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNLLFMGGYQ 95
MASTK SV+ + +L+A+ SE+ N S+ TV+ C ++ YS CGC+ + GGY
Sbjct: 1 MASTKLFFSVITV-MMLIAMASEMVNGSAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYD 59
Query: 94 FSYTGQTARMYNTGNCLGGGVFTLTGNARMC 2
FSYTGQTA +YN C G +AR C
Sbjct: 60 FSYTGQTAALYNQAGCSGVAHTRFGSSARAC 90
>ref|XP_006843118.1| hypothetical protein AMTR_s00140p00093980 [Amborella trichopoda]
gi|548845328|gb|ERN04793.1| hypothetical protein
AMTR_s00140p00093980 [Amborella trichopoda]
Length = 98
Score = 70.5 bits (171), Expect = 2e-10
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = -1
Query: 250 SVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNLLFMGGYQFSYTGQTA 71
++ L+A + MA+ + +ASSLTV+ C ++ YS CGC+ + GGY+F Y GQTA
Sbjct: 4 TIALVAILAMALATSPVSASSLTVWAGPGCNNRAERYSKCGCSGIHLKGGYEFVYNGQTA 63
Query: 70 RMYNTGNCLGGGVFTLTGNARMC 2
+YN +C G AR C
Sbjct: 64 ALYNQPDCKGVAHTRFGSGARSC 86
>ref|XP_006843120.1| hypothetical protein AMTR_s00140p00096690 [Amborella trichopoda]
gi|548845330|gb|ERN04795.1| hypothetical protein
AMTR_s00140p00096690 [Amborella trichopoda]
Length = 104
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/70 (42%), Positives = 42/70 (60%)
Frame = -1
Query: 250 SVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNLLFMGGYQFSYTGQTA 71
++ L+A + MA+ + AS TV+ C ++ S CGC+ + GGYQF YTGQTA
Sbjct: 10 TIALVAILAMALATSPVRASHFTVWAGPGCNNRAERVSKCGCSAIKQKGGYQFVYTGQTA 69
Query: 70 RMYNTGNCLG 41
+YN GNC G
Sbjct: 70 ALYNQGNCQG 79
>ref|XP_002981966.1| hypothetical protein SELMODRAFT_421332 [Selaginella moellendorffii]
gi|300150408|gb|EFJ17059.1| hypothetical protein
SELMODRAFT_421332 [Selaginella moellendorffii]
Length = 101
Score = 60.1 bits (144), Expect = 3e-07
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Frame = -1
Query: 244 LLIAFVLMAVVSEL--ANASSLTVYRLGNCGGESQTYSNCGCTNLLFM--GGYQFSYTGQ 77
+++ V++ VV + ANAS + C + YS CGCTN+ GGY F Y GQ
Sbjct: 5 MVLVLVVLVVVGSMITANASYFDTWAGPGCNNRLERYSACGCTNVGASQHGGYSFGYQGQ 64
Query: 76 TARMYNTGNCLGGGVFTLTGNARMC 2
TA YNT NC G +G+ + C
Sbjct: 65 TAAAYNTANCQGVAHTRFSGSVQDC 89
>pdb|1C01|A Chain A, Solution Structure Of Miamp1, A Plant Antimicrobial
Protein
Length = 76
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = -1
Query: 193 SSLTVYRLGNCGGESQTYSNCGCTNLLFMGGYQFSYTGQTARMYNTGNCLGGGVFTLTGN 14
S+ TV+ C ++ YS CGC+ + GGY FSYTGQTA +YN C G +
Sbjct: 1 SAFTVWSGPGCNNRAERYSKCGCSAIHQKGGYDFSYTGQTAALYNQAGCSGVAHTRFGSS 60
Query: 13 ARMC 2
AR C
Sbjct: 61 ARAC 64
>gb|AAL05053.1|AF410953_1 antimicrobial peptide 2 [Pinus sylvestris]
gi|15638613|gb|AAL05055.1|AF410955_1 antimicrobial
peptide 4 [Pinus sylvestris]
Length = 105
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = -1
Query: 265 TKNLLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNL--LFMGGYQF 92
TK L V+ + L +++ + S T + C + YS CGC+N+ GGY+F
Sbjct: 3 TKRLAYVMFVLVCLFLAMAQPSQGSYFTAWAGPGCNNHAARYSKCGCSNIGNNVHGGYEF 62
Query: 91 SYTGQTARMYNTGNCLG 41
Y GQTA YNT NC G
Sbjct: 63 MYQGQTAAAYNTDNCKG 79
>gb|AAL05054.1|AF410954_1 antimicrobial peptide 3 [Pinus sylvestris]
Length = 105
Score = 59.7 bits (143), Expect = 4e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = -1
Query: 265 TKNLLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNL--LFMGGYQF 92
TK L V+ + L +++ + S T + C + YS CGC+N+ GGY+F
Sbjct: 3 TKRLAYVMFVLVCLFLAMAQPSEGSYFTAWAGPGCNNHAARYSKCGCSNIGNNVHGGYEF 62
Query: 91 SYTGQTARMYNTGNCLG 41
Y GQTA YNT NC G
Sbjct: 63 MYQGQTASAYNTDNCKG 79
>sp|P83880.2|AMP1_PINMO RecName: Full=Antimicrobial peptide 1; AltName: Full=10.6 kDa
protein; AltName: Full=PMAP1; Flags: Precursor
gi|51317987|gb|AAU00106.1| anti-microbial protein
precursor [Pinus monticola]
Length = 105
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = -1
Query: 265 TKNLLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNL--LFMGGYQF 92
TK L V+ + L +++ + AS + + C + YS CGC+N+ GGY+F
Sbjct: 3 TKRLAYVMFVLVCLFLAMAQPSQASYFSAWAGPGCNNHNARYSKCGCSNIGHNVHGGYEF 62
Query: 91 SYTGQTARMYNTGNCLG 41
Y GQTA YNT NC G
Sbjct: 63 VYQGQTAAAYNTDNCKG 79
>gb|ADJ53037.1| antimicrobial peptide 1 [Pinus pinaster]
Length = 105
Score = 59.3 bits (142), Expect = 5e-07
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = -1
Query: 265 TKNLLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNLL--FMGGYQF 92
TK L V+ + L +++ + S T + C + YS CGC+N+ GGY+F
Sbjct: 3 TKRLAYVMFVLVCLFLALAQPSEGSYFTAWAGPGCNNHAARYSKCGCSNIGNDVHGGYEF 62
Query: 91 SYTGQTARMYNTGNCLG 41
Y GQTA YNT NC G
Sbjct: 63 VYQGQTASAYNTANCKG 79
>gb|AAL05052.1|AF410952_1 antimicrobial peptide 1 [Pinus sylvestris]
Length = 105
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -1
Query: 265 TKNLLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNL--LFMGGYQF 92
TK L V+ + L +++ + S T + C + YS CGC+N+ GY+F
Sbjct: 3 TKRLAYVMFVLVCLFLAMAQPSEGSYFTAWAGPGCNNHAARYSKCGCSNIGNNVHAGYEF 62
Query: 91 SYTGQTARMYNTGNCLG 41
Y GQTA YNT NC G
Sbjct: 63 VYQGQTASAYNTANCKG 79
>ref|XP_002981967.1| hypothetical protein SELMODRAFT_115352 [Selaginella moellendorffii]
gi|300150409|gb|EFJ17060.1| hypothetical protein
SELMODRAFT_115352 [Selaginella moellendorffii]
Length = 84
Score = 57.0 bits (136), Expect = 3e-06
Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -1
Query: 202 ANASSLTVYRLGNCGGESQTYSNCGCTNLLFM--GGYQFSYTGQTARMYNTGNCLGGGVF 29
ANAS + C + YS CGCTN+ GGY F+Y GQTA YNT NC G
Sbjct: 4 ANASYFDAWAGPGCNNRLERYSACGCTNVGASQHGGYSFAYQGQTAAAYNTANCQGVAHT 63
Query: 28 TLTGNARMC 2
+G+ + C
Sbjct: 64 RFSGSVQDC 72
>ref|XP_002981964.1| hypothetical protein SELMODRAFT_421330 [Selaginella moellendorffii]
gi|302800415|ref|XP_002981965.1| hypothetical protein
SELMODRAFT_421331 [Selaginella moellendorffii]
gi|300150406|gb|EFJ17057.1| hypothetical protein
SELMODRAFT_421330 [Selaginella moellendorffii]
gi|300150407|gb|EFJ17058.1| hypothetical protein
SELMODRAFT_421331 [Selaginella moellendorffii]
Length = 101
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = -1
Query: 256 LLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNLLFM--GGYQFSYT 83
++ VL+ VL ++++ ANAS + C + YS CGCTN+ GGY F Y
Sbjct: 5 MVLVLVAVIVLGSMIT--ANASYFDTWAGPGCNNQRVRYSACGCTNVGASQHGGYSFGYQ 62
Query: 82 GQTARMYNTGNCLGGGVFTLTGNARMC 2
GQTA YNT NC G + + + C
Sbjct: 63 GQTAAAYNTANCQGVAQTRFSASVQDC 89
>ref|XP_002981963.1| hypothetical protein SELMODRAFT_115572 [Selaginella moellendorffii]
gi|302802373|ref|XP_002982941.1| hypothetical protein
SELMODRAFT_117067 [Selaginella moellendorffii]
gi|302802375|ref|XP_002982942.1| hypothetical protein
SELMODRAFT_117256 [Selaginella moellendorffii]
gi|302802379|ref|XP_002982944.1| hypothetical protein
SELMODRAFT_117223 [Selaginella moellendorffii]
gi|302802383|ref|XP_002982946.1| hypothetical protein
SELMODRAFT_117375 [Selaginella moellendorffii]
gi|302802385|ref|XP_002982947.1| hypothetical protein
SELMODRAFT_117309 [Selaginella moellendorffii]
gi|300149531|gb|EFJ16186.1| hypothetical protein
SELMODRAFT_117067 [Selaginella moellendorffii]
gi|300149532|gb|EFJ16187.1| hypothetical protein
SELMODRAFT_117256 [Selaginella moellendorffii]
gi|300149534|gb|EFJ16189.1| hypothetical protein
SELMODRAFT_117223 [Selaginella moellendorffii]
gi|300149536|gb|EFJ16191.1| hypothetical protein
SELMODRAFT_117375 [Selaginella moellendorffii]
gi|300149537|gb|EFJ16192.1| hypothetical protein
SELMODRAFT_117309 [Selaginella moellendorffii]
gi|300150405|gb|EFJ17056.1| hypothetical protein
SELMODRAFT_115572 [Selaginella moellendorffii]
Length = 97
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Frame = -1
Query: 256 LLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNLLFM--GGYQFSYT 83
++ VL+ VL ++++ ANAS + C + YS CGCTN+ GGY F Y
Sbjct: 1 MVLVLVAVIVLGSMIT--ANASYFDTWAGPGCNNQRVRYSACGCTNVGASQHGGYSFGYQ 58
Query: 82 GQTARMYNTGNCLGGGVFTLTGNARMC 2
GQTA YNT NC G + + + C
Sbjct: 59 GQTAAAYNTANCQGVAQTRFSASVQDC 85
>tpg|DAA36327.1| TPA: hypothetical protein ZEAMMB73_042822 [Zea mays]
Length = 115
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = -1
Query: 277 AMASTKNLLSVLLIAFVLMAVVSELANA-SSLTVYRLGNCGGESQTYSNCGCTNLLFMGG 101
A+A+ +++VL+ V + + A SSLT + C G++ +CGCT+L F G
Sbjct: 12 AIATAVVVVAVLMAVAVAGVAAKDASGAPSSLTTWSAAGCSGDTSIVGSCGCTDLAFYAG 71
Query: 100 YQFSYTGQTARMYNTGNCLG 41
+F Y G+TA +Y C G
Sbjct: 72 QEFYYRGETATLYTGTGCTG 91
>gb|AFK93075.1| anti-microbial protein [Pinus monticola]
Length = 105
Score = 55.8 bits (133), Expect = 6e-06
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Frame = -1
Query: 265 TKNLLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNLLFM--GGYQF 92
TK+L V+ + L +++ + AS L+ + C + Y+ CGC+N+ GGY+F
Sbjct: 3 TKHLAYVMFVLVSLFLAMAQPSQASYLSAWVGPGCNNHNARYNKCGCSNISHNVHGGYEF 62
Query: 91 SYTGQTARMYNTGNCLG 41
Y GQ YNT NC G
Sbjct: 63 VYQGQAPMAYNTNNCKG 79
>gb|ABR16715.1| unknown [Picea sitchensis]
Length = 105
Score = 55.5 bits (132), Expect = 7e-06
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Frame = -1
Query: 262 KNLLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNL--LFMGGYQFS 89
K ++ ++ L+ V + + S T + C +S YS CGC+N+ F GGY+F
Sbjct: 4 KRFTYIMFLSVCLILVSARPSKGSYFTAWEAAGCNNQSVQYSKCGCSNIDDKFHGGYEFV 63
Query: 88 YTGQTARMYNTGNCLG 41
+ GQ+A YNT C G
Sbjct: 64 FEGQSAAAYNTEICNG 79
>ref|XP_002446987.1| hypothetical protein SORBIDRAFT_06g026400 [Sorghum bicolor]
gi|241938170|gb|EES11315.1| hypothetical protein
SORBIDRAFT_06g026400 [Sorghum bicolor]
Length = 112
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = -1
Query: 244 LLIAFVLMAVVSELANA--SSLTVYRLGNCGGESQTYSNCGCTNLLFMGGYQFSYTGQTA 71
+++A + VV++ ++ SSLT + +C G++ T CGCT+L+F G +F Y GQTA
Sbjct: 19 VVMAVAVTGVVAKDSSGPLSSLTTWSGADCSGDTSTIGACGCTDLVFYAGQEFYYRGQTA 78
Query: 70 RMYNTGNCLG 41
+Y C G
Sbjct: 79 TLYTGTGCAG 88
>gb|ABK21585.1| unknown [Picea sitchensis] gi|116790086|gb|ABK25496.1| unknown
[Picea sitchensis] gi|224285051|gb|ACN40253.1| unknown
[Picea sitchensis]
Length = 105
Score = 55.1 bits (131), Expect = 1e-05
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Frame = -1
Query: 265 TKNLLSVLLIAFVLMAVVSELANASSLTVYRLGNCGGESQTYSNCGCTNL--LFMGGYQF 92
+K ++ + L+ ++ + S T + C + YS CGC+N+ GGY+F
Sbjct: 3 SKRFACMMFLLVCLLLAFAQPSQGSYFTAWAGPGCNNHAARYSKCGCSNIGGNVHGGYEF 62
Query: 91 SYTGQTARMYNTGNCLG 41
Y GQTA YNT NC G
Sbjct: 63 VYQGQTASAYNTANCNG 79