BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00027880
         (439 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29
ref|XP_004295634.1| PREDICTED: pentatricopeptide repeat-containi...   129   3e-28
ref|XP_006355278.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_004244886.1| PREDICTED: pentatricopeptide repeat-containi...   123   2e-26
gb|EPS63069.1| hypothetical protein M569_11717 [Genlisea aurea]       121   8e-26
ref|XP_002531058.1| pentatricopeptide repeat-containing protein,...   119   3e-25
gb|EMJ13849.1| hypothetical protein PRUPE_ppa018206mg, partial [...   119   4e-25
gb|ESW19934.1| hypothetical protein PHAVU_006G167300g [Phaseolus...   116   3e-24
ref|XP_006468073.1| PREDICTED: pentatricopeptide repeat-containi...   115   5e-24
ref|XP_004485987.1| PREDICTED: pentatricopeptide repeat-containi...   115   8e-24
ref|XP_003541672.2| PREDICTED: pentatricopeptide repeat-containi...   111   1e-22
ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   108   6e-22
ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containi...   108   6e-22
gb|EXB51999.1| hypothetical protein L484_019777 [Morus notabilis]     106   4e-21
gb|EOX96932.1| Tetratricopeptide repeat (TPR)-like superfamily p...   101   1e-19
ref|XP_006413827.1| hypothetical protein EUTSA_v10027143mg [Eutr...    87   3e-15
ref|XP_006836321.1| hypothetical protein AMTR_s00092p00064890 [A...    87   3e-15
ref|NP_001078414.1| pentatricopeptide repeat-containing protein ...    86   7e-15
emb|CAB45902.1| putative protein (fragment) [Arabidopsis thalian...    86   7e-15
ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. l...    83   4e-14

>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  133 bits (334), Expect = 3e-29
 Identities = 68/112 (60%), Positives = 83/112 (74%)
 Frame = +2

Query: 104 MHSNPKYSESSNLAEINPKPHLLNLTIAAQKDPQLSPKPYILKKCIALLLSCASSNYKLR 283
           MHSN +      +   +P+ H  + TI+    P+ SPK YILKKCIALLLSCASS +K R
Sbjct: 1   MHSN-QLGRQPLIPTHSPRKHF-SFTISTSTCPE-SPKSYILKKCIALLLSCASSKFKFR 57

Query: 284 QVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSYARKIFNQIEEPNIFTWN 439
           Q+HAFSIRHGV L+NPDMGK+LIF L+S   PMSYA +IF+QI+ PNIFTWN
Sbjct: 58  QIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWN 109


>ref|XP_004295634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Fragaria vesca subsp. vesca]
          Length = 611

 Score =  129 bits (325), Expect = 3e-28
 Identities = 66/112 (58%), Positives = 82/112 (73%)
 Frame = +2

Query: 104 MHSNPKYSESSNLAEINPKPHLLNLTIAAQKDPQLSPKPYILKKCIALLLSCASSNYKLR 283
           +HS+  ++ +++L + NPK             P  +P P+IL+KCIALL SCASSN KL+
Sbjct: 6   IHSSLAHTVTADLTQ-NPK---------TTSFPSQTPLPFILQKCIALLQSCASSNSKLK 55

Query: 284 QVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSYARKIFNQIEEPNIFTWN 439
           Q+HAFSIRHGV LSNPDMGKHLIF  VSLS PMSYA  IF+QI+ PN+FTWN
Sbjct: 56  QIHAFSIRHGVPLSNPDMGKHLIFTSVSLSSPMSYAHHIFSQIKHPNVFTWN 107


>ref|XP_006355278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Solanum tuberosum]
          Length = 585

 Score =  127 bits (318), Expect = 2e-27
 Identities = 60/77 (77%), Positives = 68/77 (88%)
 Frame = +2

Query: 209 SPKPYILKKCIALLLSCASSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSY 388
           S KPYI+KKCIALLLSCASS YK +QVHAFSIR  + LS+P+MGK+LIF LVSLSGPM Y
Sbjct: 5   STKPYIVKKCIALLLSCASSTYKFKQVHAFSIRRRIPLSSPEMGKYLIFTLVSLSGPMCY 64

Query: 389 ARKIFNQIEEPNIFTWN 439
           A+KIFNQI+ PNIFTWN
Sbjct: 65  AKKIFNQIQFPNIFTWN 81


>ref|XP_004244886.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Solanum lycopersicum]
          Length = 585

 Score =  123 bits (309), Expect = 2e-26
 Identities = 59/77 (76%), Positives = 66/77 (85%)
 Frame = +2

Query: 209 SPKPYILKKCIALLLSCASSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSY 388
           S KPYI+KKCI LLLSCASS YK +QVHAFSIR  + LSNP MGK+LIF LVSLSGPM Y
Sbjct: 5   STKPYIVKKCITLLLSCASSTYKFKQVHAFSIRRRIPLSNPYMGKYLIFTLVSLSGPMCY 64

Query: 389 ARKIFNQIEEPNIFTWN 439
           A++IFNQI+ PNIFTWN
Sbjct: 65  AQQIFNQIQFPNIFTWN 81


>gb|EPS63069.1| hypothetical protein M569_11717 [Genlisea aurea]
          Length = 601

 Score =  121 bits (304), Expect = 8e-26
 Identities = 61/81 (75%), Positives = 68/81 (83%), Gaps = 1/81 (1%)
 Frame = +2

Query: 200 PQLSPKPYILKKCIALLLSCASSNY-KLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSG 376
           P  S + YILKKCIALLLSCASS+  KLRQVHAFSIRHGV+LS+P MGKHLIF LVSLS 
Sbjct: 16  PSESGRSYILKKCIALLLSCASSSVAKLRQVHAFSIRHGVSLSSPSMGKHLIFTLVSLSE 75

Query: 377 PMSYARKIFNQIEEPNIFTWN 439
           PM YA K+F+QI  PNIFTW+
Sbjct: 76  PMQYAHKVFDQIPHPNIFTWD 96


>ref|XP_002531058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529353|gb|EEF31319.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  119 bits (299), Expect = 3e-25
 Identities = 62/113 (54%), Positives = 77/113 (68%), Gaps = 1/113 (0%)
 Frame = +2

Query: 104 MHSNPKYSESSNL-AEINPKPHLLNLTIAAQKDPQLSPKPYILKKCIALLLSCASSNYKL 280
           MHS P   +   L +  NP    +    A +   + +P PYI+KKCIALL  CASS YKL
Sbjct: 1   MHSTPPTDQQLVLHSSQNP----ITYFTAPKPASKENPIPYIVKKCIALLQICASSKYKL 56

Query: 281 RQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSYARKIFNQIEEPNIFTWN 439
           +Q+HAFSIRHGV  +NPDMGKHLI+ +VS+S PM+YA  IF  I+ PNIFTWN
Sbjct: 57  QQIHAFSIRHGVLPNNPDMGKHLIYSIVSVSAPMTYAHNIFTLIQNPNIFTWN 109


>gb|EMJ13849.1| hypothetical protein PRUPE_ppa018206mg, partial [Prunus persica]
          Length = 604

 Score =  119 bits (298), Expect = 4e-25
 Identities = 58/96 (60%), Positives = 71/96 (73%)
 Frame = +2

Query: 152 NPKPHLLNLTIAAQKDPQLSPKPYILKKCIALLLSCASSNYKLRQVHAFSIRHGVALSNP 331
           NPK    +L+  +   PQ +P  YIL+KCIALL  CASS  K++Q+HAFS+RHGV LS+P
Sbjct: 6   NPKTLFSSLSAPSPTFPQ-NPIHYILQKCIALLQCCASSKLKMQQIHAFSVRHGVPLSSP 64

Query: 332 DMGKHLIFLLVSLSGPMSYARKIFNQIEEPNIFTWN 439
           DMGKHLIF  VSL  PM YA +IF+QI  PN+FTWN
Sbjct: 65  DMGKHLIFTTVSLKAPMPYAHQIFSQIRSPNVFTWN 100


>gb|ESW19934.1| hypothetical protein PHAVU_006G167300g [Phaseolus vulgaris]
          Length = 611

 Score =  116 bits (291), Expect = 3e-24
 Identities = 56/97 (57%), Positives = 66/97 (68%)
 Frame = +2

Query: 149 INPKPHLLNLTIAAQKDPQLSPKPYILKKCIALLLSCASSNYKLRQVHAFSIRHGVALSN 328
           +   P + + T      PQ     Y+L KCI LL S ASS YKLRQ+HAFSIRHGV+L N
Sbjct: 11  VQSHPSMFHATNFLSTTPQNPLPYYLLTKCIVLLQSSASSKYKLRQIHAFSIRHGVSLHN 70

Query: 329 PDMGKHLIFLLVSLSGPMSYARKIFNQIEEPNIFTWN 439
           PDM KHLIF +VSLS PMSYA  +F +I  PN+FTWN
Sbjct: 71  PDMAKHLIFTIVSLSAPMSYAYNVFTRIHNPNVFTWN 107


>ref|XP_006468073.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Citrus sinensis]
          Length = 616

 Score =  115 bits (289), Expect = 5e-24
 Identities = 62/113 (54%), Positives = 81/113 (71%), Gaps = 1/113 (0%)
 Frame = +2

Query: 104 MHSN-PKYSESSNLAEINPKPHLLNLTIAAQKDPQLSPKPYILKKCIALLLSCASSNYKL 280
           MHS  P Y E S+L        L + T A+Q++P  S    +++KCI LL  CASS +KL
Sbjct: 6   MHSKQPSYEEISDLP--CRVKSLYHSTPASQENPITS----VVRKCITLLQVCASSKHKL 59

Query: 281 RQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSYARKIFNQIEEPNIFTWN 439
           +QVHAFSIRHGV L+NPD+GK+LI+ +VSLS PMSYA  IF+ +++PNIFTWN
Sbjct: 60  KQVHAFSIRHGVPLNNPDLGKYLIYAIVSLSFPMSYAHNIFSHVQDPNIFTWN 112


>ref|XP_004485987.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cicer arietinum]
          Length = 610

 Score =  115 bits (287), Expect = 8e-24
 Identities = 59/106 (55%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
 Frame = +2

Query: 131 SSNLAEI--NPKPHLLN-LTIAAQKDPQLSPKPYILKKCIALLLSCASSNYKLRQVHAFS 301
           SS L+ +   PK HL + +T +   +   +P  +IL KCIALL  CASS +KL+Q+HAFS
Sbjct: 4   SSKLSSLFHTPKNHLSSFITFSTTSE---NPTSHILTKCIALLQYCASSKHKLKQIHAFS 60

Query: 302 IRHGVALSNPDMGKHLIFLLVSLSGPMSYARKIFNQIEEPNIFTWN 439
           IRHGV L+NPDMGK+LIF +VSLS PMSYA  +F  +  PN+FTWN
Sbjct: 61  IRHGVPLNNPDMGKYLIFTVVSLSAPMSYAYNVFTLLHNPNVFTWN 106


>ref|XP_003541672.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 607

 Score =  111 bits (277), Expect = 1e-22
 Identities = 50/71 (70%), Positives = 59/71 (83%)
 Frame = +2

Query: 227 LKKCIALLLSCASSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSYARKIFN 406
           L KCI+LL  CASS +KL+Q+HAFSIRHGV+L+NPDMGKHLIF +VSLS PMSYA  +F 
Sbjct: 33  LTKCISLLQFCASSKHKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFT 92

Query: 407 QIEEPNIFTWN 439
            I  PN+FTWN
Sbjct: 93  VIHNPNVFTWN 103


>ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  108 bits (271), Expect = 6e-22
 Identities = 50/73 (68%), Positives = 59/73 (80%)
 Frame = +2

Query: 221 YILKKCIALLLSCASSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSYARKI 400
           +IL+KCI+L+  C SS  KL+Q+HAFSIRHGV   NPD  KHLIF LVSLS PMS+A +I
Sbjct: 32  FILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQI 91

Query: 401 FNQIEEPNIFTWN 439
           FNQI+ PNIFTWN
Sbjct: 92  FNQIQAPNIFTWN 104


>ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  108 bits (271), Expect = 6e-22
 Identities = 50/73 (68%), Positives = 59/73 (80%)
 Frame = +2

Query: 221 YILKKCIALLLSCASSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSYARKI 400
           +IL+KCI+L+  C SS  KL+Q+HAFSIRHGV   NPD  KHLIF LVSLS PMS+A +I
Sbjct: 32  FILRKCISLVQLCGSSQSKLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQI 91

Query: 401 FNQIEEPNIFTWN 439
           FNQI+ PNIFTWN
Sbjct: 92  FNQIQAPNIFTWN 104


>gb|EXB51999.1| hypothetical protein L484_019777 [Morus notabilis]
          Length = 623

 Score =  106 bits (264), Expect = 4e-21
 Identities = 50/77 (64%), Positives = 60/77 (77%)
 Frame = +2

Query: 209 SPKPYILKKCIALLLSCASSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSY 388
           +P P I+ K I+LL  CASS  KL Q+HAFSIRHGV L++PDMGKHLIF  VSLS  MSY
Sbjct: 42  NPIPIIIAKYISLLQLCASSESKLMQIHAFSIRHGVPLADPDMGKHLIFTAVSLSASMSY 101

Query: 389 ARKIFNQIEEPNIFTWN 439
           A  +F+QI+ PNI+TWN
Sbjct: 102 ANNVFSQIDRPNIYTWN 118


>gb|EOX96932.1| Tetratricopeptide repeat (TPR)-like superfamily protein isoform 1
           [Theobroma cacao] gi|508705037|gb|EOX96933.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao] gi|508705038|gb|EOX96934.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein
           isoform 1 [Theobroma cacao]
          Length = 616

 Score =  101 bits (251), Expect = 1e-19
 Identities = 46/77 (59%), Positives = 61/77 (79%)
 Frame = +2

Query: 209 SPKPYILKKCIALLLSCASSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSY 388
           +P  +I+KKCI+LL +  SS  KLRQ+HAFS+RHGV L++PD+GKHLI+ LVSLS PMSY
Sbjct: 36  NPVSFIVKKCISLLQNYGSSELKLRQIHAFSLRHGVPLNDPDIGKHLIYSLVSLSTPMSY 95

Query: 389 ARKIFNQIEEPNIFTWN 439
              IF++I+  N+F WN
Sbjct: 96  PYSIFSRIQSSNVFIWN 112


>ref|XP_006413827.1| hypothetical protein EUTSA_v10027143mg [Eutrema salsugineum]
           gi|557114997|gb|ESQ55280.1| hypothetical protein
           EUTSA_v10027143mg [Eutrema salsugineum]
          Length = 595

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 45/76 (59%), Positives = 59/76 (77%), Gaps = 4/76 (5%)
 Frame = +2

Query: 224 ILKKCIALLLSCA-SSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSG--PMSYAR 394
           ++ KCI LL +C  SS  KL++VHAFSIRHGV++S+ + GKHLIF LVSL    PMSYA 
Sbjct: 14  MVDKCITLLQTCGVSSLTKLKKVHAFSIRHGVSISDAEFGKHLIFYLVSLPSPPPMSYAH 73

Query: 395 KIFNQIEEP-NIFTWN 439
           K+F++IE+P N+F WN
Sbjct: 74  KVFSKIEKPINVFIWN 89


>ref|XP_006836321.1| hypothetical protein AMTR_s00092p00064890 [Amborella trichopoda]
           gi|548838839|gb|ERM99174.1| hypothetical protein
           AMTR_s00092p00064890 [Amborella trichopoda]
          Length = 285

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 56/132 (42%), Positives = 74/132 (56%), Gaps = 20/132 (15%)
 Frame = +2

Query: 104 MHSNPKYSESSNLAEINPKPHLLNLTIAAQKDPQLSPKPYILK----------------- 232
           MH NP  S+S       P+P     ++ A K+P LSP P  L                  
Sbjct: 1   MHINPIPSQSFMPL---PRPS----SVPAFKNPTLSPLPSFLSLKPRTFTNSPYYPLPKT 53

Query: 233 ---KCIALLLSCASSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSGPMSYARKIF 403
              +C+ALL +C +S   ++Q+HAF +R+GVA S+P +GKHLIF LVSLS PM YA  IF
Sbjct: 54  IPNQCVALLQNC-NSLPSVKQIHAFGLRNGVAPSDPLVGKHLIFSLVSLSTPMRYALNIF 112

Query: 404 NQIEEPNIFTWN 439
           + I+ PN FTWN
Sbjct: 113 SHIQFPNAFTWN 124


>ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g21065 gi|332658994|gb|AEE84394.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/76 (59%), Positives = 60/76 (78%), Gaps = 4/76 (5%)
 Frame = +2

Query: 224 ILKKCIALLLSCA-SSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSG--PMSYAR 394
           +++KCI LL +   SS  KLRQ+HAFSIRHGV++S+ ++GKHLIF LVSL    PMSYA 
Sbjct: 14  MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73

Query: 395 KIFNQIEEP-NIFTWN 439
           K+F++IE+P N+F WN
Sbjct: 74  KVFSKIEKPINVFIWN 89


>emb|CAB45902.1| putative protein (fragment) [Arabidopsis thaliana]
           gi|7268904|emb|CAB79107.1| putative protein (fragment)
           [Arabidopsis thaliana]
          Length = 1495

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/76 (59%), Positives = 60/76 (78%), Gaps = 4/76 (5%)
 Frame = +2

Query: 224 ILKKCIALLLSCA-SSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSG--PMSYAR 394
           +++KCI LL +   SS  KLRQ+HAFSIRHGV++S+ ++GKHLIF LVSL    PMSYA 
Sbjct: 14  MVEKCINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73

Query: 395 KIFNQIEEP-NIFTWN 439
           K+F++IE+P N+F WN
Sbjct: 74  KVFSKIEKPINVFIWN 89


>ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 595

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 44/76 (57%), Positives = 60/76 (78%), Gaps = 4/76 (5%)
 Frame = +2

Query: 224 ILKKCIALLLSCA-SSNYKLRQVHAFSIRHGVALSNPDMGKHLIFLLVSLSG--PMSYAR 394
           +++KCI LL +   SS  KLRQ+HAFSIR+GV++S+ ++GKHLIF LVSL    PMSYA 
Sbjct: 14  MVEKCINLLQTYGVSSLTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAH 73

Query: 395 KIFNQIEEP-NIFTWN 439
           K+F++IE+P N+F WN
Sbjct: 74  KVFSKIEKPINVFIWN 89