BLASTX nr result
ID: Catharanthus22_contig00027847
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00027847
(1045 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_398413.1| orf173 [Triticum aestivum] gi|78675253|dbj|BAE4... 142 5e-43
ref|YP_514677.1| hypothetical protein OrsaiPp50 [Oryza sativa In... 139 2e-41
ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncat... 134 1e-38
ref|YP_005090395.1| orf142 (mitochondrion) [Phoenix dactylifera]... 157 8e-36
ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin... 120 1e-34
ref|YP_588285.1| hypothetical protein ZeamMp021 [Zea mays subsp.... 150 6e-34
gb|AAD34889.1| unknown [Oryza sativa] 147 9e-33
ref|NP_085585.1| hypothetical protein ArthMp026 [Arabidopsis tha... 81 6e-13
emb|CAN64512.1| hypothetical protein VITISV_004351 [Vitis vinifera] 80 1e-12
emb|CBI23503.3| unnamed protein product [Vitis vinifera] 79 3e-12
ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, part... 75 3e-11
sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreduct... 75 4e-11
emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vu... 75 4e-11
ref|NP_064003.1| orf300 gene product (mitochondrion) [Beta vulga... 75 4e-11
>ref|YP_398413.1| orf173 [Triticum aestivum] gi|78675253|dbj|BAE47678.1| orf173
[Triticum aestivum] gi|578888274|gb|AHI16378.1| orf173
(mitochondrion) [Triticum durum]
gi|578888302|gb|AHI16405.1| orf173 (mitochondrion)
[Triticum durum] gi|578888303|gb|AHI16406.1| orf173
(mitochondrion) [Triticum durum]
Length = 173
Score = 142 bits (358), Expect(2) = 5e-43
Identities = 92/169 (54%), Positives = 99/169 (58%), Gaps = 4/169 (2%)
Frame = +3
Query: 462 MSGGAKRSSLNQRLNEIH--SFLDIKIEIG*DRWIYLSIHIYY*KNGFI**RSKAPNP*F 635
MSGGAKRSSLNQR +EI SFLDI I D WIYLSI I + + +P
Sbjct: 1 MSGGAKRSSLNQRFHEIEIDSFLDIWI----DGWIYLSIQISF---------AISPKSLI 47
Query: 636 --GQERLHCFGPXXXXXXXXXXXXHTSFSSCPFRMRFARHWRFALLLFFHWTVRMDFAVL 809
G + L + H S CPFRMRFARHWRFALLLF HW VRMDFAVL
Sbjct: 48 WPGNKAL-LWAQEAKGMSSAASPPHFFISPCPFRMRFARHWRFALLLFLHWRVRMDFAVL 106
Query: 810 SQLK*KGLYHIEMSIRFPPPMRWGILNPLFILSFGPFIFLNRNPARLAS 956
SQ K KGLYHIEMSIRFPP MRWGI + PFIFL AR S
Sbjct: 107 SQRKWKGLYHIEMSIRFPPQMRWGISH------LCPFIFLKGIEARPGS 149
Score = 60.1 bits (144), Expect(2) = 5e-43
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = +1
Query: 931 IETRPGSRRSNYRRGAPQYTIARSNWESY*T 1023
IE RPGSRRSN RRGAPQYTIARSNWESY T
Sbjct: 143 IEARPGSRRSNNRRGAPQYTIARSNWESYYT 173
>ref|YP_514677.1| hypothetical protein OrsaiPp50 [Oryza sativa Indica Group]
gi|194033260|ref|YP_002000597.1| hypothetical protein
OrsajM_p53 [Oryza sativa Japonica Group]
gi|289065050|ref|YP_003433861.1| hypothetical protein
OrrupM_p24 [Oryza rufipogon] gi|23495421|dbj|BAC19901.1|
hypothetical protein [Oryza sativa Japonica Group]
gi|56784287|dbj|BAD81969.1| Mitchondrion orf173 [Oryza
sativa Japonica Group] gi|74100110|gb|AAZ99274.1|
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] gi|74100165|gb|AAZ99328.1| hypothetical
protein (mitochondrion) [Oryza sativa Japonica Group]
gi|74100219|gb|AAZ99381.1| hypothetical protein
(mitochondrion) [Oryza sativa Japonica Group]
gi|285026132|dbj|BAI67965.1| hypothetical protein [Oryza
rufipogon] gi|285026182|dbj|BAI68014.1| hypothetical
protein [Oryza sativa Indica Group]
gi|285026195|dbj|BAI68027.1| hypothetical protein [Oryza
sativa Indica Group] gi|353685247|gb|AER13010.1|
hypothetical protein (mitochondrion) [Oryza sativa
Indica Group] gi|353685248|gb|AER13011.1| hypothetical
protein (mitochondrion) [Oryza sativa Indica Group]
gi|353685319|gb|AER13081.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|353685320|gb|AER13082.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277602|gb|AEZ03708.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|374277704|gb|AEZ03809.1| hypothetical protein
(mitochondrion) [Oryza sativa Indica Group]
gi|528540426|dbj|BAN67480.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540468|dbj|BAN67521.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
gi|528540497|dbj|BAN67550.1| hypothetical protein
(mitochondrion) [Oryza rufipogon]
Length = 173
Score = 139 bits (349), Expect(2) = 2e-41
Identities = 90/169 (53%), Positives = 97/169 (57%), Gaps = 4/169 (2%)
Frame = +3
Query: 462 MSGGAKRSSLNQRLNEIH--SFLDIKIEIG*DRWIYLSIHIYY*KNGFI**RSKAPNP*F 635
MSGGAKRSSLNQR EI SFLDI I D WIYL I I + + +P
Sbjct: 1 MSGGAKRSSLNQRFYEIEIDSFLDIWI----DGWIYLDIQISF---------AISPKSLI 47
Query: 636 --GQERLHCFGPXXXXXXXXXXXXHTSFSSCPFRMRFARHWRFALLLFFHWTVRMDFAVL 809
G + L + H S CPFRMRFARHWRFALLLF HW VRMDFAVL
Sbjct: 48 WPGNKAL-LWAQEAKGMSSAASPPHFFISPCPFRMRFARHWRFALLLFLHWRVRMDFAVL 106
Query: 810 SQLK*KGLYHIEMSIRFPPPMRWGILNPLFILSFGPFIFLNRNPARLAS 956
SQ K KGLYHIEMSIRFPP MRWGI + PFIF+ AR S
Sbjct: 107 SQRKWKGLYHIEMSIRFPPQMRWGISH------LCPFIFMKGIKARPGS 149
Score = 58.5 bits (140), Expect(2) = 2e-41
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +1
Query: 931 IETRPGSRRSNYRRGAPQYTIARSNWESY*T 1023
I+ RPGSRRSN RRGAPQYTIARSNWESY T
Sbjct: 143 IKARPGSRRSNNRRGAPQYTIARSNWESYYT 173
>ref|XP_003588352.1| NADH dehydrogenase subunit [Medicago truncatula]
gi|355477400|gb|AES58603.1| NADH dehydrogenase subunit
[Medicago truncatula]
Length = 1094
Score = 134 bits (337), Expect(2) = 1e-38
Identities = 68/93 (73%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
Frame = -3
Query: 893 GVQNSPSHWGRKTNRHLDVIQPFLF*LGKNGEVHPNRPMKE*EESK-XXXXXXXXXXXXX 717
GV NSPSHWGRKTNRHLDVIQPFLF LGKNGEVHPNRPMK +K
Sbjct: 790 GVNNSPSHWGRKTNRHLDVIQPFLFLLGKNGEVHPNRPMKNKRRAKRQWRAKRMRKGHGE 849
Query: 716 XXRSVEEKQPSSFPSLPGPKAVQSFLAKSRIWG 618
SVE+KQPSSFPSLPGPKAVQSFLAKSRIWG
Sbjct: 850 KKISVEDKQPSSFPSLPGPKAVQSFLAKSRIWG 882
Score = 53.5 bits (127), Expect(2) = 1e-38
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1
Query: 1015 RTPSYCARSYTEVLPAGSWNDASR 944
RTPSYCARSYTEVLPAG WNDASR
Sbjct: 766 RTPSYCARSYTEVLPAGCWNDASR 789
Score = 90.1 bits (222), Expect = 1e-15
Identities = 59/139 (42%), Positives = 67/139 (48%)
Frame = -3
Query: 422 YPKHWSNPVGGKGPRSAYYYTTLHLALHIYRVTPVQCLAELRGLQSLLFIPIFAQANGAL 243
YPK+WS PV GKGPRSA YYTTLH ALHIYR P ++G S+L AQANGAL
Sbjct: 883 YPKNWSGPVAGKGPRSANYYTTLHSALHIYRANPCPVPGRVKG-ASILIPYSLAQANGAL 941
Query: 242 LIQGGESSLEKHC*EEDPWPLFILYRVPNLSST*VTTSEAEMEEIKHGNKKQARLPF*SF 63
LIQGGES + +T E ++
Sbjct: 942 LIQGGESGAPR------------------------STVERKI------------------ 959
Query: 62 **RGMEKVDKTDSHFSSNK 6
GMEKVDKTDSHF K
Sbjct: 960 --LGMEKVDKTDSHFPVEK 976
>ref|YP_005090395.1| orf142 (mitochondrion) [Phoenix dactylifera]
gi|343478447|gb|AEM43935.1| orf142 (mitochondrion)
[Phoenix dactylifera]
Length = 141
Score = 157 bits (396), Expect = 8e-36
Identities = 94/161 (58%), Positives = 102/161 (63%), Gaps = 4/161 (2%)
Frame = +3
Query: 462 MSGGAKRSSLNQRLNEIH--SFLDIKIEIG*DRWIYLSIHIYY*KNGFI**RSKAPNP*F 635
MSGGAKRSSLNQ LNEI SFLDI+I D WIYLSIHIY+ +++P
Sbjct: 1 MSGGAKRSSLNQTLNEIEIDSFLDIRI----DGWIYLSIHIYF---------ARSPKSLI 47
Query: 636 --GQERLHCFGPXXXXXXXXXXXXHTSFSSCPFRMRFARHWRFALLLFFHWTVRMDFAVL 809
G + L + H S CPFRMRFARHWRFALLLF HWTVRMDFAVL
Sbjct: 48 WPGNKAL-LWAQEAKGMSSAASPPHFFISPCPFRMRFARHWRFALLLFLHWTVRMDFAVL 106
Query: 810 SQLK*KGLYHIEMSIRFPPPMRWGILNPLFILSFGPFIFLN 932
SQ K KGLYHIEMSIRFPP MRWGI + PFIFLN
Sbjct: 107 SQRKWKGLYHIEMSIRFPPQMRWGISH------LCPFIFLN 141
>ref|XP_004153848.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
chain 2-like, partial [Cucumis sativus]
Length = 472
Score = 120 bits (302), Expect(2) = 1e-34
Identities = 66/103 (64%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Frame = -3
Query: 893 GVQNSPSHWGRKTNRHLDVIQPFLF*LGKNGEVHPNRPMKE*EESK-XXXXXXXXXXXXX 717
GV NSPSHWGRKTNRHLDV QP F LGKNGEVHPNRPMK +K
Sbjct: 370 GVTNSPSHWGRKTNRHLDVRQPLKFELGKNGEVHPNRPMKNKRRTKGQWRAKRMXRERTR 429
Query: 716 XXRSVEEKQPSSFPSLPGPKAVQSFLAKSRIWGLATLLYKSIF 588
SVE+K PSSFPSLPGPKAVQSFLAKSRI+G + L F
Sbjct: 430 IKISVEKKLPSSFPSLPGPKAVQSFLAKSRIFGASRNLRNPFF 472
Score = 53.5 bits (127), Expect(2) = 1e-34
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1
Query: 1015 RTPSYCARSYTEVLPAGSWNDASR 944
RTPSYCARSYTEVLPAG WNDASR
Sbjct: 346 RTPSYCARSYTEVLPAGCWNDASR 369
>ref|YP_588285.1| hypothetical protein ZeamMp021 [Zea mays subsp. mays]
gi|94502600|ref|YP_588307.1| hypothetical protein
ZeamMp045 [Zea mays subsp. mays]
gi|40795038|gb|AAR91082.1| hypothetical protein
(mitochondrion) [Zea mays] gi|40795039|gb|AAR91083.1|
hypothetical protein (mitochondrion) [Zea mays]
gi|413952656|gb|AFW85305.1| putative uncharacterized
protein orf158-a2 [Zea mays]
Length = 158
Score = 150 bits (380), Expect = 6e-34
Identities = 102/185 (55%), Positives = 109/185 (58%), Gaps = 5/185 (2%)
Frame = +3
Query: 462 MSGGAKRSSLNQRLNEIH--SFLDIKIEIG*DRWIYLSIHIYY*KNGFI**RSKAPNP*F 635
MSGGAKRSSLNQR +EI SFLDI I D WIYLSI I + + +P
Sbjct: 1 MSGGAKRSSLNQRFHEIKIDSFLDIWI----DGWIYLSIQISF---------AISPKSLI 47
Query: 636 --GQERLHCFGPXXXXXXXXXXXXHTS-FSSCPFRMRFARHWRFALLLFFHWTVRMDFAV 806
G + L HTS F P FARHWRFALLLF HW VRMDFAV
Sbjct: 48 WPGNKAL------LWAQEAKLLLLHTSLFLRAP--SAFARHWRFALLLFLHWRVRMDFAV 99
Query: 807 LSQLK*KGLYHIEMSIRFPPPMRWGILNPLFILSFGPFIFLNRNPARLASFQLPAGSTSV 986
LSQ K KGLYHIEMSIRFPP MRWGI + PFIF+ ARLASFQ P GST V
Sbjct: 100 LSQRKWKGLYHIEMSIRFPPQMRWGISH------LCPFIFMKGIEARLASFQQPTGSTPV 153
Query: 987 YDRAQ 1001
YDRAQ
Sbjct: 154 YDRAQ 158
>gb|AAD34889.1| unknown [Oryza sativa]
Length = 166
Score = 147 bits (370), Expect = 9e-33
Identities = 98/186 (52%), Positives = 107/186 (57%), Gaps = 6/186 (3%)
Frame = +3
Query: 462 MSGGAKRSSLNQRLNEIH--SFLDIKIEIG*DRWIYLSIHIYY*KNGFI**RSKAPNP*F 635
MSGGAKRSSLNQR EI SFLDI I D WIYL I I + + +P
Sbjct: 1 MSGGAKRSSLNQRFYEIEIDSFLDIWI----DGWIYLDIQISF---------AISPKSLI 47
Query: 636 --GQERLHCFGPXXXXXXXXXXXXHTSFSSCPFRMRFARHWRFALLLFFHWTVRMDFAVL 809
G + L + H S CPFRMRFARHWRFALLLF HW VRMDFAVL
Sbjct: 48 WPGNKAL-LWAQEAKGMSSAASPPHFFISPCPFRMRFARHWRFALLLFLHWRVRMDFAVL 106
Query: 810 SQLK*KGLYHIEMSIRFPPPMRWGILNPLFILSFGPFIFLNRNPARLASFQL--PAGSTS 983
SQ K KGLYHIEMSIRFPP MRWGI + PFIF+ AR S + G+ S
Sbjct: 107 SQRKWKGLYHIEMSIRFPPQMRWGISH------LCPFIFMKGIKARPGSRRSNNRRGAPS 160
Query: 984 VYDRAQ 1001
VYDRAQ
Sbjct: 161 VYDRAQ 166
>ref|NP_085585.1| hypothetical protein ArthMp026 [Arabidopsis thaliana]
gi|45477077|sp|P92563.1|M1330_ARATH RecName:
Full=Uncharacterized mitochondrial protein AtMg01330;
AltName: Full=ORF107h gi|1785786|emb|CAA69783.1| unnamed
protein product [Arabidopsis thaliana]
Length = 127
Score = 81.3 bits (199), Expect = 6e-13
Identities = 44/59 (74%), Positives = 46/59 (77%)
Frame = -2
Query: 957 TTRAGPGFDSER*RAQKKV*IGGSKFPISLGAENESTSRCDTALSILVGKERRSPSEPS 781
T+R GPGF R KV IGG KFPISLGAENESTSRCDTA S LVGKERRSPSEP+
Sbjct: 10 TSRDGPGF---RKMKGPKVEIGGYKFPISLGAENESTSRCDTAFSFLVGKERRSPSEPN 65
Score = 66.6 bits (161), Expect = 2e-08
Identities = 47/106 (44%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Frame = -3
Query: 929 QKDEGPKRKYK*GVQNSPSHWGRKTNRHLDVIQPFLF*LGKN--GEVHPNRPMKE*EESK 756
+K +GPK + G P G + F F +GK PNRPMK +K
Sbjct: 18 RKMKGPKVEI--GGYKFPISLGAENESTSRCDTAFSFLVGKERRSPSEPNRPMKNKRRAK 75
Query: 755 XXXXXXXXXXXXXXXRSVEEKQPSSFPSLPGPKAVQSFLAKSRIWG 618
SVEEKQPSSFPS PGPKAVQSFLAKSRIWG
Sbjct: 76 PNGEAHAEQARRKI--SVEEKQPSSFPSHPGPKAVQSFLAKSRIWG 119
>emb|CAN64512.1| hypothetical protein VITISV_004351 [Vitis vinifera]
Length = 282
Score = 80.5 bits (197), Expect = 1e-12
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = -2
Query: 1044 GELKLALGLIGLPVTARDRILRCSPPVVGTTRAGPGFDSER 922
GELKLALG+IGLPVTARDRILRCSPPVVGTTRAGPG DSER
Sbjct: 242 GELKLALGVIGLPVTARDRILRCSPPVVGTTRAGPGPDSER 282
>emb|CBI23503.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 79.0 bits (193), Expect = 3e-12
Identities = 38/41 (92%), Positives = 40/41 (97%)
Frame = -2
Query: 1044 GELKLALGLIGLPVTARDRILRCSPPVVGTTRAGPGFDSER 922
GELKLALG+IGLPVTARDRILRCSPPVVGTTRAGPG DS+R
Sbjct: 486 GELKLALGVIGLPVTARDRILRCSPPVVGTTRAGPGPDSKR 526
>ref|XP_006401945.1| hypothetical protein EUTSA_v10015951mg, partial [Eutrema salsugineum]
gi|557103035|gb|ESQ43398.1| hypothetical protein
EUTSA_v10015951mg, partial [Eutrema salsugineum]
Length = 414
Score = 75.5 bits (184), Expect = 3e-11
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -2
Query: 1044 GELKLALGLIGLPVTARDRILRCSPPVVGTTRAGPGFDSER 922
GELK +LG+IGLPVTARDRI+RCSPPVVGTTRAG G DSER
Sbjct: 374 GELKFSLGVIGLPVTARDRIMRCSPPVVGTTRAGTGLDSER 414
>sp|P15688.2|NU2M_BETVU RecName: Full=NADH-ubiquinone oxidoreductase chain 2; AltName:
Full=NADH dehydrogenase subunit 2
gi|12822|emb|CAA34728.1| NADH:ubiquinone reductase
subunit 2 [Beta vulgaris subsp. vulgaris]
Length = 515
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -2
Query: 1044 GELKLALGLIGLPVTARDRILRCSPPVVGTTRAGPGFDSER 922
GE +LALG+IGLPVTA DRILRCSPPVVGTTRAGPG +SER
Sbjct: 475 GEFELALGVIGLPVTAHDRILRCSPPVVGTTRAGPGLNSER 515
>emb|CAA34729.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
Length = 464
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -2
Query: 1044 GELKLALGLIGLPVTARDRILRCSPPVVGTTRAGPGFDSER 922
GE +LALG+IGLPVTA DRILRCSPPVVGTTRAGPG +SER
Sbjct: 424 GEFELALGVIGLPVTAHDRILRCSPPVVGTTRAGPGLNSER 464
>ref|NP_064003.1| orf300 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435152|ref|YP_004222370.1| hypothetical protein
BevumaM_p137 [Beta vulgaris subsp. maritima]
gi|346683243|ref|YP_004842175.1| hypothetical protein
BemaM_p131 [Beta macrocarpa] gi|9049305|dbj|BAA99315.1|
orf300 [Beta vulgaris subsp. vulgaris]
gi|317905602|emb|CBJ14009.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439885|emb|CBJ17585.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|320148039|emb|CBJ20703.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500161|emb|CBX24980.1|
hypothetical protein [Beta macrocarpa]
gi|384977913|emb|CBL54137.1| hypothetical protein
(mitochondrion) [Beta vulgaris subsp. maritima]
Length = 300
Score = 75.1 bits (183), Expect = 4e-11
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -2
Query: 1044 GELKLALGLIGLPVTARDRILRCSPPVVGTTRAGPGFDSER 922
GE +LALG+IGLPVTA DRILRCSPPVVGTTRAGPG +SER
Sbjct: 260 GEFELALGVIGLPVTAHDRILRCSPPVVGTTRAGPGLNSER 300