BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00027649
         (439 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containi...    76   4e-12
ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
ref|XP_006604760.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containi...    67   3e-09
emb|CBI36977.3| unnamed protein product [Vitis vinifera]               60   2e-07
gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus...    57   3e-06

>ref|XP_006355831.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Solanum tuberosum]
          Length = 529

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 39/67 (58%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
 Frame = -1

Query: 196 PLSCSFA--RCFCTLSVVNLNHIINGFIRVGNLDSARQLFDKSSHRLNTVSWNSMINGYI 23
           P  C+FA  R   TLS VNLN  IN FI  GNL  AR+LFD+S H  N VSWNS+I GY 
Sbjct: 2   PALCTFALRRQISTLSTVNLNKTINSFIGNGNLQEARKLFDQSPHLTNVVSWNSLIAGYF 61

Query: 22  RHNHLQQ 2
           +HN +QQ
Sbjct: 62  KHNLIQQ 68


>ref|XP_004240647.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Solanum lycopersicum]
          Length = 630

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 36/67 (53%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = -1

Query: 196 PLSCSFARC--FCTLSVVNLNHIINGFIRVGNLDSARQLFDKSSHRLNTVSWNSMINGYI 23
           P  C+FA C    TLS VNLN  IN FI  GNL  AR+ FD+S H  N VSWNS+  GY 
Sbjct: 2   PALCTFALCRQISTLSTVNLNKTINRFIGNGNLQEARKFFDQSPHLTNVVSWNSLTAGYF 61

Query: 22  RHNHLQQ 2
           +HN +Q+
Sbjct: 62  KHNLIQK 68


>ref|XP_006604760.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X2 [Glycine max]
          Length = 299

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/70 (41%), Positives = 48/70 (68%)
 Frame = -1

Query: 214 RFLAMQPLSCSFARCFCTLSVVNLNHIINGFIRVGNLDSARQLFDKSSHRLNTVSWNSMI 35
           R L+  P  CSF R  CT++   LN++I+ +I+  N+++AR+LFD++    N VSWN M+
Sbjct: 6   RLLSRTP--CSFPRNMCTVTSAKLNYMIDAYIQGNNINNARKLFDENPSSRNLVSWNMMM 63

Query: 34  NGYIRHNHLQ 5
            GY++H+ +Q
Sbjct: 64  TGYVKHHQIQ 73


>ref|XP_006604759.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like isoform X1 [Glycine max]
          Length = 531

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/70 (41%), Positives = 48/70 (68%)
 Frame = -1

Query: 214 RFLAMQPLSCSFARCFCTLSVVNLNHIINGFIRVGNLDSARQLFDKSSHRLNTVSWNSMI 35
           R L+  P  CSF R  CT++   LN++I+ +I+  N+++AR+LFD++    N VSWN M+
Sbjct: 6   RLLSRTP--CSFPRNMCTVTSAKLNYMIDAYIQGNNINNARKLFDENPSSRNLVSWNMMM 63

Query: 34  NGYIRHNHLQ 5
            GY++H+ +Q
Sbjct: 64  TGYVKHHQIQ 73


>emb|CBI36977.3| unnamed protein product [Vitis vinifera]
          Length = 372

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 28/55 (50%), Positives = 40/55 (72%)
 Frame = -1

Query: 178 ARCFCTLSVVNLNHIINGFIRVGNLDSARQLFDKSSHRLNTVSWNSMINGYIRHN 14
           +R   TLS  NLN +ING+IR GNL  AR+LFD++    NTV WN++I+ YI+++
Sbjct: 12  SRHIYTLSTANLNRLINGYIRKGNLRDARKLFDQNPTSRNTVIWNTIISAYIQND 66


>gb|ESW35233.1| hypothetical protein PHAVU_001G217700g [Phaseolus vulgaris]
          Length = 561

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 28/81 (34%), Positives = 48/81 (59%)
 Frame = -1

Query: 247 RRNHANMFMSTRFLAMQPLSCSFARCFCTLSVVNLNHIINGFIRVGNLDSARQLFDKSSH 68
           +R +A MF   + L+  P  C  A   CT++   LN++I+  I+  N++ AR+LFD +  
Sbjct: 30  KRRNAEMF---QLLSRTPCFC--AHNMCTVTSAKLNYMIDAHIQDNNINQARKLFDDNPS 84

Query: 67  RLNTVSWNSMINGYIRHNHLQ 5
             N VSWN M+ G+++H  ++
Sbjct: 85  SRNLVSWNMMMTGHVKHYQIE 105