BLASTX nr result
ID: Catharanthus22_contig00027606
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00027606
(390 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004502265.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 146 2e-33
ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 146 3e-33
gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao] 145 4e-33
ref|XP_002460479.1| hypothetical protein SORBIDRAFT_02g029000 [S... 145 5e-33
gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus pe... 144 9e-33
ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like i... 144 2e-32
tpg|DAA62223.1| TPA: hypothetical protein ZEAMMB73_319569 [Zea m... 144 2e-32
ref|XP_003601731.1| DNA topoisomerase [Medicago truncatula] gi|3... 144 2e-32
ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 143 2e-32
ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [... 143 3e-32
ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 142 4e-32
emb|CBI39422.3| unnamed protein product [Vitis vinifera] 142 5e-32
ref|XP_004957260.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 141 1e-31
gb|EMS49347.1| DNA topoisomerase 3-beta-1 [Triticum urartu] 140 1e-31
ref|XP_006293663.1| hypothetical protein CARUB_v10022619mg [Caps... 140 2e-31
ref|XP_003578369.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 140 2e-31
ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [... 139 4e-31
ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ric... 138 7e-31
gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indi... 137 1e-30
ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group] g... 137 1e-30
>ref|XP_004502265.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Cicer
arietinum]
Length = 859
Score = 146 bits (369), Expect = 2e-33
Identities = 70/90 (77%), Positives = 78/90 (86%)
Frame = +2
Query: 119 PKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVFSV 298
PKVLMVAEKPSI LSIA+VLS G M TR+G+TEVHEFEG F+GS +FKVTSVIGHVFSV
Sbjct: 4 PKVLMVAEKPSIALSIASVLSHGQMFTRKGSTEVHEFEGRFLGSPARFKVTSVIGHVFSV 63
Query: 299 DFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
DFPG YQDW TDPLDLF+A ++K ESNPK
Sbjct: 64 DFPGKYQDWAATDPLDLFQAQVLKTESNPK 93
>ref|XP_004296978.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Fragaria vesca subsp.
vesca]
Length = 862
Score = 146 bits (368), Expect = 3e-33
Identities = 70/89 (78%), Positives = 79/89 (88%)
Frame = +2
Query: 122 KVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVFSVD 301
KVLMVAEKPSI LSIA VLS G MSTR+ +T+VHEFEGTF G HVQFKVTSVIGHVFS+D
Sbjct: 5 KVLMVAEKPSIALSIANVLSRGQMSTRKASTDVHEFEGTFRGYHVQFKVTSVIGHVFSLD 64
Query: 302 FPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
FP +YQ+WT TDPLDLF+AP+ KAE+NPK
Sbjct: 65 FPETYQNWTVTDPLDLFQAPVRKAEANPK 93
>gb|EOY05077.1| DNA topoisomerase, type IA, core [Theobroma cacao]
Length = 868
Score = 145 bits (367), Expect = 4e-33
Identities = 69/90 (76%), Positives = 78/90 (86%)
Frame = +2
Query: 119 PKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVFSV 298
PKVLMVAEKPSI LSIA+VLS G MSTRRG+TEVHEF GTF+G + +KVTSVIGHVFSV
Sbjct: 5 PKVLMVAEKPSIALSIASVLSHGKMSTRRGSTEVHEFNGTFLGFNAHYKVTSVIGHVFSV 64
Query: 299 DFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
DFP SYQDW T+PLDLF+A ++K ESNPK
Sbjct: 65 DFPASYQDWNVTNPLDLFQASVIKTESNPK 94
>ref|XP_002460479.1| hypothetical protein SORBIDRAFT_02g029000 [Sorghum bicolor]
gi|241923856|gb|EER97000.1| hypothetical protein
SORBIDRAFT_02g029000 [Sorghum bicolor]
Length = 866
Score = 145 bits (366), Expect = 5e-33
Identities = 68/92 (73%), Positives = 80/92 (86%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
MAPKVLMVAEKPSI LSIA+ LS G MSTR+G+T+VHEF+GTF GS+ FKVTSVIGHV
Sbjct: 1 MAPKVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGTFQGSYANFKVTSVIGHVL 60
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
SVDFP +YQ+W TDPLDLFEAP++++E NPK
Sbjct: 61 SVDFPPAYQNWEATDPLDLFEAPVLRSECNPK 92
>gb|EMJ26496.1| hypothetical protein PRUPE_ppa001274mg [Prunus persica]
Length = 866
Score = 144 bits (364), Expect = 9e-33
Identities = 69/89 (77%), Positives = 78/89 (87%)
Frame = +2
Query: 122 KVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVFSVD 301
KV+MVAEKPSI LSIA+VLS G MSTR+ +T+VHEFEG F+G HV FKVTSVIGHVFSVD
Sbjct: 5 KVIMVAEKPSIALSIASVLSRGQMSTRKASTDVHEFEGMFLGFHVHFKVTSVIGHVFSVD 64
Query: 302 FPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
FP YQ+WTTTDPLDLF+API K E+NPK
Sbjct: 65 FPEKYQNWTTTDPLDLFQAPIQKTEANPK 93
>ref|XP_006358793.1| PREDICTED: DNA topoisomerase 3-beta-1-like isoform X1 [Solanum
tuberosum]
Length = 860
Score = 144 bits (362), Expect = 2e-32
Identities = 68/92 (73%), Positives = 81/92 (88%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
MAPKVLMVAEKPSI LSIA+VLS ++STRRG+TEVHEF+ F+GS +KVTSVIGHVF
Sbjct: 1 MAPKVLMVAEKPSIALSIASVLSGAHVSTRRGSTEVHEFDAMFLGSRAHYKVTSVIGHVF 60
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
SVDFP ++QDWTTT+P DLF+API+K E+NPK
Sbjct: 61 SVDFPAAFQDWTTTNPSDLFQAPILKKETNPK 92
>tpg|DAA62223.1| TPA: hypothetical protein ZEAMMB73_319569 [Zea mays]
Length = 110
Score = 144 bits (362), Expect = 2e-32
Identities = 67/92 (72%), Positives = 80/92 (86%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
MAPKVLMVAEKPSI LSIA+ LS G MSTR+G+T+VHEF+GTF GS+ FKVTSVIGHV
Sbjct: 1 MAPKVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGTFQGSYANFKVTSVIGHVL 60
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
SVDFP +YQ+W TDP+DLFEAP++++E NPK
Sbjct: 61 SVDFPPAYQNWEGTDPMDLFEAPVLRSECNPK 92
>ref|XP_003601731.1| DNA topoisomerase [Medicago truncatula] gi|355490779|gb|AES71982.1|
DNA topoisomerase [Medicago truncatula]
Length = 1024
Score = 144 bits (362), Expect = 2e-32
Identities = 69/90 (76%), Positives = 77/90 (85%)
Frame = +2
Query: 119 PKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVFSV 298
PKVLMVAEKPSI LSIATVLS G M+TRRG+TEVHEF+G F + +FKVTSVIGHVFSV
Sbjct: 4 PKVLMVAEKPSIALSIATVLSHGKMNTRRGSTEVHEFDGKFRKAPARFKVTSVIGHVFSV 63
Query: 299 DFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
DFPG YQDW TDPLDLF+A ++K ESNPK
Sbjct: 64 DFPGKYQDWAATDPLDLFQAQVIKNESNPK 93
>ref|XP_004248022.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Solanum lycopersicum]
Length = 864
Score = 143 bits (361), Expect = 2e-32
Identities = 68/92 (73%), Positives = 79/92 (85%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
MAPKV MVAEKPSI LSIA+VLS MSTRRG+TEVHEF+ F+GS +KVTSVIGHVF
Sbjct: 1 MAPKVFMVAEKPSIALSIASVLSGAQMSTRRGSTEVHEFDAMFLGSRAHYKVTSVIGHVF 60
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
SVDFP ++QDWTTT+P DLF+API+K E+NPK
Sbjct: 61 SVDFPAAFQDWTTTNPSDLFQAPILKKETNPK 92
>ref|XP_002264970.2| PREDICTED: DNA topoisomerase 3-beta-1-like [Vitis vinifera]
Length = 894
Score = 143 bits (360), Expect = 3e-32
Identities = 72/103 (69%), Positives = 82/103 (79%), Gaps = 2/103 (1%)
Frame = +2
Query: 86 NSKRQFYCEMAPKVLMVAEKPSIGLSIATVLSCGNMSTRRG--TTEVHEFEGTFMGSHVQ 259
NS+ + +L VAEKPSI LSIA+ LS G+MSTRRG +TEVHEF GTF GS+ Q
Sbjct: 19 NSEILIFSHFLFDILQVAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQ 78
Query: 260 FKVTSVIGHVFSVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
+KVTSVIGHVFSVDFP YQDWT TDPLDLF+API+KAESNPK
Sbjct: 79 YKVTSVIGHVFSVDFPAKYQDWTVTDPLDLFQAPILKAESNPK 121
>ref|XP_003538536.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Glycine max]
Length = 863
Score = 142 bits (359), Expect = 4e-32
Identities = 68/90 (75%), Positives = 76/90 (84%)
Frame = +2
Query: 119 PKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVFSV 298
PKVLMVAEKPSI LSIA+VLS M TRRG+TEVHEF+G F+GS F+VTSVIGHVFSV
Sbjct: 6 PKVLMVAEKPSIALSIASVLSHAQMFTRRGSTEVHEFDGKFLGSPAHFRVTSVIGHVFSV 65
Query: 299 DFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
DFPG YQDW TDPLDLF+A ++K ESNPK
Sbjct: 66 DFPGKYQDWAATDPLDLFQAQVIKNESNPK 95
>emb|CBI39422.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 142 bits (358), Expect = 5e-32
Identities = 70/90 (77%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
Frame = +2
Query: 125 VLMVAEKPSIGLSIATVLSCGNMSTRRG--TTEVHEFEGTFMGSHVQFKVTSVIGHVFSV 298
+L VAEKPSI LSIA+ LS G+MSTRRG +TEVHEF GTF GS+ Q+KVTSVIGHVFSV
Sbjct: 48 ILQVAEKPSIALSIASALSGGHMSTRRGGSSTEVHEFNGTFRGSNAQYKVTSVIGHVFSV 107
Query: 299 DFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
DFP YQDWT TDPLDLF+API+KAESNPK
Sbjct: 108 DFPAKYQDWTVTDPLDLFQAPILKAESNPK 137
>ref|XP_004957260.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Setaria italica]
Length = 868
Score = 141 bits (355), Expect = 1e-31
Identities = 65/92 (70%), Positives = 79/92 (85%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
MAPKVLMVAEKPSI LSIA+ LS G MSTR+G+T++HEF+G F GS+ FKVTSVIGHV
Sbjct: 1 MAPKVLMVAEKPSIALSIASALSGGRMSTRKGSTDIHEFDGMFQGSYANFKVTSVIGHVL 60
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
SVDFP +YQ+W TDP+DLFEAP++++E NPK
Sbjct: 61 SVDFPPAYQNWDGTDPMDLFEAPVLRSECNPK 92
>gb|EMS49347.1| DNA topoisomerase 3-beta-1 [Triticum urartu]
Length = 870
Score = 140 bits (354), Expect = 1e-31
Identities = 66/92 (71%), Positives = 79/92 (85%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
MAPKVLMVAEKPSI LSIA+ LS G MSTR+G+T+VHEF+G F GS F+VTSVIGHVF
Sbjct: 1 MAPKVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSQAFFRVTSVIGHVF 60
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
SVDFP +YQ+W TDP+DLF AP++++ESNPK
Sbjct: 61 SVDFPPAYQNWEGTDPMDLFNAPVLRSESNPK 92
>ref|XP_006293663.1| hypothetical protein CARUB_v10022619mg [Capsella rubella]
gi|482562371|gb|EOA26561.1| hypothetical protein
CARUB_v10022619mg [Capsella rubella]
Length = 864
Score = 140 bits (352), Expect = 2e-31
Identities = 67/90 (74%), Positives = 76/90 (84%)
Frame = +2
Query: 119 PKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVFSV 298
P+VLMVAEKPSI LSIA+VLS G MSTRRG+TEVHEF+G F G F++TSVIGHVFSV
Sbjct: 5 PRVLMVAEKPSIALSIASVLSRGQMSTRRGSTEVHEFDGMFRGFKAHFRITSVIGHVFSV 64
Query: 299 DFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
DFP YQ+WTT DP DLF+API+K ESNPK
Sbjct: 65 DFPEKYQNWTTIDPQDLFDAPILKKESNPK 94
>ref|XP_003578369.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Brachypodium
distachyon]
Length = 868
Score = 140 bits (352), Expect = 2e-31
Identities = 65/92 (70%), Positives = 79/92 (85%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
MAPKVLMVAEKPSI LSIA+ +S G MSTR+G+T+VHEF+GTF GS F+VTSVIGHVF
Sbjct: 1 MAPKVLMVAEKPSIALSIASAISGGRMSTRKGSTDVHEFDGTFQGSQAFFRVTSVIGHVF 60
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
SVDFP +YQ+W TDP+DLF AP++++E NPK
Sbjct: 61 SVDFPPAYQNWEGTDPVDLFNAPVLRSECNPK 92
>ref|XP_004147675.1| PREDICTED: DNA topoisomerase 3-beta-1-like [Cucumis sativus]
Length = 867
Score = 139 bits (350), Expect = 4e-31
Identities = 64/92 (69%), Positives = 77/92 (83%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
+AP VLMVAEKPSI LSIA+ LS G MSTR+G+TEVHEF+G F+G H +KVTSVIGHVF
Sbjct: 2 VAPTVLMVAEKPSIALSIASALSHGQMSTRKGSTEVHEFDGRFLGHHAYYKVTSVIGHVF 61
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
S+DF +QDW +TDPLDLF+A ++K ESNPK
Sbjct: 62 SIDFQAGFQDWKSTDPLDLFQASVIKTESNPK 93
>ref|XP_002516387.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
gi|223544485|gb|EEF46004.1| prokaryotic DNA
topoisomerase, putative [Ricinus communis]
Length = 865
Score = 138 bits (348), Expect = 7e-31
Identities = 65/90 (72%), Positives = 75/90 (83%)
Frame = +2
Query: 119 PKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVFSV 298
P VLMVAEKPSI LSIA+ LS G MS+++G TEVHEF+G F+G +KVTSVIGH+FSV
Sbjct: 4 PVVLMVAEKPSIALSIASALSHGQMSSKKGGTEVHEFDGMFLGFQAHYKVTSVIGHIFSV 63
Query: 299 DFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
DFP YQDWT DP+DLF+APIVKAESNPK
Sbjct: 64 DFPQKYQDWTANDPMDLFQAPIVKAESNPK 93
>gb|EEC84829.1| hypothetical protein OsI_31918 [Oryza sativa Indica Group]
Length = 866
Score = 137 bits (346), Expect = 1e-30
Identities = 65/92 (70%), Positives = 77/92 (83%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
MAP VLMVAEKPSI LSIA+ LS G MSTR+G+T+VHEF+G F GSH FKVTSVIGHV
Sbjct: 1 MAPTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSHAFFKVTSVIGHVL 60
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
SVDFP +YQ+W TDP+DLF AP++++E NPK
Sbjct: 61 SVDFPPAYQNWEGTDPMDLFVAPVLRSECNPK 92
>ref|NP_001063578.1| Os09g0500600 [Oryza sativa Japonica Group]
gi|113631811|dbj|BAF25492.1| Os09g0500600 [Oryza sativa
Japonica Group] gi|215695029|dbj|BAG90220.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 866
Score = 137 bits (346), Expect = 1e-30
Identities = 65/92 (70%), Positives = 77/92 (83%)
Frame = +2
Query: 113 MAPKVLMVAEKPSIGLSIATVLSCGNMSTRRGTTEVHEFEGTFMGSHVQFKVTSVIGHVF 292
MAP VLMVAEKPSI LSIA+ LS G MSTR+G+T+VHEF+G F GSH FKVTSVIGHV
Sbjct: 1 MAPTVLMVAEKPSIALSIASALSGGRMSTRKGSTDVHEFDGMFQGSHAFFKVTSVIGHVL 60
Query: 293 SVDFPGSYQDWTTTDPLDLFEAPIVKAESNPK 388
SVDFP +YQ+W TDP+DLF AP++++E NPK
Sbjct: 61 SVDFPPAYQNWEGTDPMDLFVAPVLRSECNPK 92