BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus22_contig00027553
         (345 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMJ00280.1| hypothetical protein PRUPE_ppa019139mg [Prunus pe...    71   1e-10
ref|XP_006340008.1| PREDICTED: putative pentatricopeptide repeat...    70   3e-10
ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat...    70   3e-10
emb|CBI29414.3| unnamed protein product [Vitis vinifera]               70   3e-10
ref|XP_004247284.1| PREDICTED: putative pentatricopeptide repeat...    69   8e-10
gb|EOX93881.1| Tetratricopeptide repeat (TPR)-like superfamily p...    68   1e-09
gb|EXB99118.1| hypothetical protein L484_007026 [Morus notabilis]      67   3e-09
emb|CAN74869.1| hypothetical protein VITISV_004322 [Vitis vinifera]    63   5e-08
ref|XP_002301797.2| pentatricopeptide repeat-containing family p...    61   1e-07
ref|XP_004292362.1| PREDICTED: putative pentatricopeptide repeat...    57   3e-06

>gb|EMJ00280.1| hypothetical protein PRUPE_ppa019139mg [Prunus persica]
          Length = 607

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 31/56 (55%), Positives = 46/56 (82%)
 Frame = -3

Query: 175 LKNLLLACNDRAQIFEVHALMILSGLFSYGTSTAQIVSSYARVGEIEFARKVFDKL 8
           L++LLL+C D+A   ++HALMIL+G  +YG S A+++++YAR+G+I  ARKVFDKL
Sbjct: 10  LRSLLLSCKDKASTAKIHALMILTGTITYGNSNARLIATYARIGDIVSARKVFDKL 65


>ref|XP_006340008.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Solanum tuberosum]
          Length = 675

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/63 (50%), Positives = 46/63 (73%)
 Frame = -3

Query: 193 RYFGKDLKNLLLACNDRAQIFEVHALMILSGLFSYGTSTAQIVSSYARVGEIEFARKVFD 14
           R    +LK LLL C   A I ++HAL+++SGLFS+G S A ++SSYA+VG+++ A K+FD
Sbjct: 2   RLLPHELKPLLLTCKHNALISQIHALLVVSGLFSHGNSIAPLISSYAKVGDLKSAHKLFD 61

Query: 13  KLP 5
           K P
Sbjct: 62  KSP 64


>ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/60 (53%), Positives = 44/60 (73%)
 Frame = -3

Query: 181 KDLKNLLLACNDRAQIFEVHALMILSGLFSYGTSTAQIVSSYARVGEIEFARKVFDKLPK 2
           K LK LL+   D   I ++HALMIL+G+F +G S A+++ SYAR+G IE AR+VFDK P+
Sbjct: 8   KSLKTLLITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQ 67


>emb|CBI29414.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 32/60 (53%), Positives = 44/60 (73%)
 Frame = -3

Query: 181 KDLKNLLLACNDRAQIFEVHALMILSGLFSYGTSTAQIVSSYARVGEIEFARKVFDKLPK 2
           K LK LL+   D   I ++HALMIL+G+F +G S A+++ SYAR+G IE AR+VFDK P+
Sbjct: 8   KSLKTLLITSKDEPTIAKIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQ 67


>ref|XP_004247284.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Solanum lycopersicum]
          Length = 675

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 32/63 (50%), Positives = 44/63 (69%)
 Frame = -3

Query: 193 RYFGKDLKNLLLACNDRAQIFEVHALMILSGLFSYGTSTAQIVSSYARVGEIEFARKVFD 14
           R    +LK LLL C   A I ++H LM++SGLFS G S AQ++SSY +VG+++ A K+FD
Sbjct: 2   RLLPHELKPLLLRCKHNALISQIHTLMVVSGLFSNGNSIAQLISSYGKVGDLKSAHKLFD 61

Query: 13  KLP 5
           K P
Sbjct: 62  KSP 64


>gb|EOX93881.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           [Theobroma cacao]
          Length = 597

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/58 (55%), Positives = 44/58 (75%)
 Frame = -3

Query: 181 KDLKNLLLACNDRAQIFEVHALMILSGLFSYGTSTAQIVSSYARVGEIEFARKVFDKL 8
           K LK+LLLAC DR  I ++H LMIL+GL+ + TS   ++++YAR G+I  ARKVFD+L
Sbjct: 8   KRLKSLLLACKDRKPIAKIHTLMILTGLYIHKTSVGNLIAAYARAGDILSARKVFDQL 65


>gb|EXB99118.1| hypothetical protein L484_007026 [Morus notabilis]
          Length = 592

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 30/57 (52%), Positives = 43/57 (75%)
 Frame = -3

Query: 175 LKNLLLACNDRAQIFEVHALMILSGLFSYGTSTAQIVSSYARVGEIEFARKVFDKLP 5
           L++LLL+C D+  +F++HAL+IL+GL S+G S A ++ SYAR+     AR VFDKLP
Sbjct: 4   LRSLLLSCKDKQSLFKIHALVILTGLLSHGNSNALLIKSYARITGAVSARHVFDKLP 60


>emb|CAN74869.1| hypothetical protein VITISV_004322 [Vitis vinifera]
          Length = 328

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/60 (51%), Positives = 44/60 (73%)
 Frame = -3

Query: 181 KDLKNLLLACNDRAQIFEVHALMILSGLFSYGTSTAQIVSSYARVGEIEFARKVFDKLPK 2
           K LK LL+A  D+  I ++HAL IL+G+F +G S A+++  YAR+G IE AR+VFDK P+
Sbjct: 7   KSLKTLLVASKDKPTIAKIHALAILTGIFGHGNSNAKLI-LYARLGHIESARQVFDKSPQ 65


>ref|XP_002301797.2| pentatricopeptide repeat-containing family protein, partial
           [Populus trichocarpa] gi|550345752|gb|EEE81070.2|
           pentatricopeptide repeat-containing family protein,
           partial [Populus trichocarpa]
          Length = 599

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
 Frame = -3

Query: 181 KDLKNLLLACNDRAQIFEVHALMILSGLFSYGTS-TAQIVSSYARVGEIEFARKVFDKLP 5
           K LK+LLLAC D A + ++HAL+I +GLF   ++    +++SYAR+G I  AR +FDKLP
Sbjct: 8   KRLKHLLLACKDEAPVTQIHALIITTGLFFANSNFNGLVIASYARIGGITSARHLFDKLP 67

Query: 4   K 2
           +
Sbjct: 68  Q 68


>ref|XP_004292362.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Fragaria vesca subsp.
           vesca]
          Length = 613

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 24/57 (42%), Positives = 40/57 (70%)
 Frame = -3

Query: 175 LKNLLLACNDRAQIFEVHALMILSGLFSYGTSTAQIVSSYARVGEIEFARKVFDKLP 5
           L+ LL +C  +  I ++HA MI++G  ++  S A +++SYA +G+ E ARKVFD++P
Sbjct: 10  LRPLLSSCKHKPTISKIHAFMIVTGAITHANSNAPLIASYASIGDTETARKVFDEIP 66