BLASTX nr result
ID: Catharanthus22_contig00027454
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00027454
(260 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 114 2e-23
ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668... 108 6e-22
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana] 108 7e-22
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 108 7e-22
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal... 108 7e-22
emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis ... 108 7e-22
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA... 107 2e-21
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali... 107 2e-21
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 105 8e-21
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 104 1e-20
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 103 2e-20
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg... 103 2e-20
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 103 2e-20
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 102 4e-20
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 102 4e-20
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 102 5e-20
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 101 1e-19
ref|XP_004174164.1| PREDICTED: uncharacterized protein LOC101232... 100 3e-19
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 100 3e-19
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 99 6e-19
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 114 bits (284), Expect = 2e-23
Identities = 46/84 (54%), Positives = 67/84 (79%)
Frame = +2
Query: 8 LKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRG 187
LKID+RKA+DT+SW F+ +++Q L+ P F+ W+ C+ +P FS+ ING++ G+FKG+RG
Sbjct: 43 LKIDLRKAFDTVSWEFITKIMQALNLPRTFVTWVKVCMETPKFSVSINGELAGYFKGRRG 102
Query: 188 LRQGDPMSPCLFVLCMEYLSRSLN 259
LRQGDP+SP LF++ ME LSR L+
Sbjct: 103 LRQGDPLSPYLFIMSMEVLSRMLD 126
>ref|XP_006595311.1| PREDICTED: uncharacterized protein LOC102668530 [Glycine max]
Length = 477
Score = 108 bits (271), Expect = 6e-22
Identities = 49/85 (57%), Positives = 62/85 (72%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C LKID+ KAY++ISW FL +L+ + FP F WIM C+T+ SFS+ +NG I G FKG+
Sbjct: 24 CLLKIDLHKAYNSISWEFLDWMLKSMGFPTQFCSWIMECITTTSFSVVVNGSIYGHFKGQ 83
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSL 256
GLRQGDP+ P LFVLC+EY S L
Sbjct: 84 HGLRQGDPLFPYLFVLCLEYFSCDL 108
>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
Length = 1161
Score = 108 bits (270), Expect = 7e-22
Identities = 47/84 (55%), Positives = 66/84 (78%)
Frame = +2
Query: 8 LKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRG 187
L++DI KAYD ++W FL +L+ LD P VFI WI C++S S+S+ NG+++GFF+GK+G
Sbjct: 633 LQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKG 692
Query: 188 LRQGDPMSPCLFVLCMEYLSRSLN 259
+RQGDPMS LFVL M+ LS+SL+
Sbjct: 693 IRQGDPMSSHLFVLVMDVLSKSLD 716
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 108 bits (270), Expect = 7e-22
Identities = 48/85 (56%), Positives = 63/85 (74%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +K+DIRKAYD++ W FL+ +L FP F+GWIM CV++ S+S+ +NG F+ +
Sbjct: 579 CIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQAR 638
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSL 256
+GLRQGDPMSP LF LCMEYLSR L
Sbjct: 639 KGLRQGDPMSPFLFALCMEYLSRCL 663
>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 910
Score = 108 bits (270), Expect = 7e-22
Identities = 47/84 (55%), Positives = 66/84 (78%)
Frame = +2
Query: 8 LKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRG 187
L++DI KAYD ++W FL +L+ LD P VFI WI C++S S+S+ NG+++GFF+GK+G
Sbjct: 590 LQVDISKAYDNVNWEFLINILKALDLPLVFIHWIWVCISSASYSIAFNGELIGFFQGKKG 649
Query: 188 LRQGDPMSPCLFVLCMEYLSRSLN 259
+RQGDPMS LFVL M+ LS+SL+
Sbjct: 650 IRQGDPMSSHLFVLVMDVLSKSLD 673
>emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis thaliana]
gi|7268153|emb|CAB78489.1| reverse transcriptase like
protein [Arabidopsis thaliana]
Length = 318
Score = 108 bits (270), Expect = 7e-22
Identities = 47/86 (54%), Positives = 65/86 (75%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +KIDI KA+D++ W FL+ VL LDFP VF+ WIM CVT+ SFS+++NG++ G+F
Sbjct: 30 CAIKIDISKAFDSVQWTFLKNVLLTLDFPQVFVHWIMLCVTTASFSVQVNGELAGYFNSS 89
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSLN 259
RGLRQG +SP LFV+ M+ LS+ L+
Sbjct: 90 RGLRQGCSLSPYLFVIVMDVLSKKLD 115
>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
AT4g02490 [Arabidopsis thaliana]
Length = 657
Score = 107 bits (267), Expect = 2e-21
Identities = 44/84 (52%), Positives = 66/84 (78%)
Frame = +2
Query: 8 LKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRG 187
L++D+ KAYD ++W FL +L+ L+ P +FI WI C+++PS+S+ NG+++GFF GK+G
Sbjct: 137 LQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCISTPSYSIAYNGELIGFFVGKKG 196
Query: 188 LRQGDPMSPCLFVLCMEYLSRSLN 259
+RQGDPMS LFVL M+ L+RSL+
Sbjct: 197 IRQGDPMSSHLFVLVMDILARSLD 220
>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
Length = 543
Score = 107 bits (267), Expect = 2e-21
Identities = 44/84 (52%), Positives = 66/84 (78%)
Frame = +2
Query: 8 LKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRG 187
L++D+ KAYD ++W FL +L+ L+ P +FI WI C+++PS+S+ NG+++GFF GK+G
Sbjct: 137 LQVDLTKAYDNVNWEFLINILKALNLPPIFINWIWVCISTPSYSIAYNGELIGFFVGKKG 196
Query: 188 LRQGDPMSPCLFVLCMEYLSRSLN 259
+RQGDPMS LFVL M+ L+RSL+
Sbjct: 197 IRQGDPMSSHLFVLVMDILARSLD 220
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 105 bits (261), Expect = 8e-21
Identities = 45/86 (52%), Positives = 64/86 (74%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +KIDI KA+D++ W FL L ++F FI WI C+T+ SFS+++NGD+VG+F+ K
Sbjct: 241 CAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSK 300
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSLN 259
RGLRQG +SP LFV+CM+ LS+ L+
Sbjct: 301 RGLRQGCSLSPYLFVICMDVLSKMLD 326
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 104 bits (260), Expect = 1e-20
Identities = 45/86 (52%), Positives = 63/86 (73%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +KIDI KA D++ W FL L + FP +FI WI C+T+PSFS+++NG++ GFF+
Sbjct: 147 CAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSS 206
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSLN 259
RGLRQG +SP LFV+CM+ LS+ L+
Sbjct: 207 RGLRQGCALSPYLFVICMDVLSKLLD 232
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 103 bits (258), Expect = 2e-20
Identities = 43/86 (50%), Positives = 67/86 (77%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +KIDI KA++++ W F++ +L +DFP F+ WIM C+++ SFS+++NG++VGFF+ K
Sbjct: 121 CAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSK 180
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSLN 259
RGLRQG +SP LFV+ M+ LS+ L+
Sbjct: 181 RGLRQGCSLSPYLFVMSMDVLSKLLD 206
>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
gi|346683183|ref|YP_004842114.1| hypothetical protein
BemaM_p069 [Beta macrocarpa]
gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
hypothetical protein [Beta macrocarpa]
Length = 238
Score = 103 bits (258), Expect = 2e-20
Identities = 49/85 (57%), Positives = 61/85 (71%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +K+D+RKAYD+I W FLQ +L L FP FI WIM CVT+ S+S+ +NG F K
Sbjct: 45 CMIKVDLRKAYDSIEWSFLQCMLSELGFPSQFITWIMECVTTVSYSILLNGKPTTPFPSK 104
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSL 256
+G+RQGDPMSP LF + MEYLSR L
Sbjct: 105 KGVRQGDPMSPFLFAIGMEYLSRCL 129
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 103 bits (258), Expect = 2e-20
Identities = 44/83 (53%), Positives = 62/83 (74%)
Frame = +2
Query: 8 LKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKRG 187
LK+D+RKA+D++ W F+ E L+ + P F+ WI C+TS SFS+ ++G + G+FKG +G
Sbjct: 589 LKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWIKQCITSTSFSINVSGSLCGYFKGSKG 648
Query: 188 LRQGDPMSPCLFVLCMEYLSRSL 256
LRQGDP+SP LFV+ ME LSR L
Sbjct: 649 LRQGDPLSPSLFVIAMEILSRLL 671
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 102 bits (255), Expect = 4e-20
Identities = 44/86 (51%), Positives = 63/86 (73%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +KIDI KA+D++ W FL V +L FP FI WI C+T+ SFS+++NG++ G+F+
Sbjct: 594 CAIKIDISKAFDSVQWPFLINVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSS 653
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSLN 259
RGLRQG +SP LFV+CM+ LS+ L+
Sbjct: 654 RGLRQGCALSPYLFVICMDVLSKMLD 679
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 102 bits (255), Expect = 4e-20
Identities = 44/86 (51%), Positives = 64/86 (74%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +KIDI KA+D++ W FL VL ++FPG FI WI C+++ SFS+++NG++ G+F+
Sbjct: 315 CAMKIDISKAFDSLQWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSA 374
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSLN 259
RGLRQG +SP LFV+ M+ LSR L+
Sbjct: 375 RGLRQGCSLSPYLFVISMDVLSRMLD 400
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 102 bits (254), Expect = 5e-20
Identities = 47/85 (55%), Positives = 63/85 (74%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +K+DIRKAYD++ W FL+ +L+ L FP +FI WIMACV + S+S+ +NG F +
Sbjct: 582 CVIKVDIRKAYDSVEWVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQ 641
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSL 256
+GLRQGDP+SP LF L MEYLSR +
Sbjct: 642 KGLRQGDPLSPFLFALSMEYLSRCM 666
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse
transcriptase [Arabidopsis thaliana]
Length = 662
Score = 101 bits (251), Expect = 1e-19
Identities = 44/86 (51%), Positives = 63/86 (73%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +KIDI KA+D++ W FL+ VL LDFP F+ WIM CVT+ SFS+++N ++ G+F
Sbjct: 112 CAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCVTTASFSVQVNRELAGYFNSL 171
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSLN 259
RGLRQG ++P LFV+ M+ LS+ L+
Sbjct: 172 RGLRQGCSLTPYLFVIVMDVLSKKLD 197
>ref|XP_004174164.1| PREDICTED: uncharacterized protein LOC101232793, partial [Cucumis
sativus]
Length = 174
Score = 100 bits (248), Expect = 3e-19
Identities = 43/78 (55%), Positives = 60/78 (76%)
Frame = +2
Query: 5 TLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGKR 184
T+K+D++KAYD+++W FL +L + P F+ W+ ACVTSP FS+ ING + GFF G++
Sbjct: 16 TMKVDLQKAYDSVNWDFLFGLLIAIGTPLRFVSWVRACVTSPMFSIMINGSLEGFFHGRK 75
Query: 185 GLRQGDPMSPCLFVLCME 238
GLRQGDP+SP LFV+ ME
Sbjct: 76 GLRQGDPLSPFLFVMVME 93
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 100 bits (248), Expect = 3e-19
Identities = 42/86 (48%), Positives = 62/86 (72%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
C +KIDI KA+D++ W+FL L+ L+FP F WI C+++ +FS+++NG++ GFF K
Sbjct: 167 CAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSK 226
Query: 182 RGLRQGDPMSPCLFVLCMEYLSRSLN 259
RGLRQG +SP LFV+CM LS ++
Sbjct: 227 RGLRQGCALSPYLFVICMNVLSHMID 252
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 99.0 bits (245), Expect = 6e-19
Identities = 42/82 (51%), Positives = 57/82 (69%)
Frame = +2
Query: 2 CTLKIDIRKAYDTISWRFLQEVLQLLDFPGVFIGWIMACVTSPSFSLRINGDIVGFFKGK 181
CT +D+ KA DT+ W F+ LQ + P IGWI +C++S FS+ +NG++ GFF +
Sbjct: 415 CTFMVDMMKANDTVEWDFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARR 474
Query: 182 RGLRQGDPMSPCLFVLCMEYLS 247
RGLRQGDP+SP LFV+ ME LS
Sbjct: 475 RGLRQGDPLSPYLFVIAMEVLS 496