BLASTX nr result
ID: Catharanthus22_contig00027418
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus22_contig00027418
(242 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOX93994.1| DNA/RNA polymerases superfamily protein [Theobrom... 87 1e-16
emb|CAN68955.1| hypothetical protein VITISV_014191 [Vitis vinifera] 91 2e-16
gb|EOX94092.1| Gag protease polyprotein [Theobroma cacao] 85 2e-16
gb|EOY32328.1| Uncharacterized protein TCM_040115 [Theobroma cacao] 84 3e-16
gb|EOX94089.1| Uncharacterized protein TCM_003206 [Theobroma cacao] 82 5e-16
gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobrom... 81 1e-15
gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobrom... 83 5e-15
gb|EOY08653.1| DNA/RNA polymerases superfamily protein [Theobrom... 80 1e-14
gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica G... 78 1e-14
emb|CAN69016.1| hypothetical protein VITISV_016361 [Vitis vinifera] 81 2e-14
gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao] 80 2e-14
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom... 79 3e-14
ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera] 83 4e-14
gb|EOY21236.1| Uncharacterized protein TCM_012637 [Theobroma cacao] 78 7e-14
gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-... 77 1e-13
gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor] 74 2e-13
gb|EMJ22433.1| hypothetical protein PRUPE_ppb019121mg [Prunus pe... 74 2e-13
emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera] 80 2e-13
emb|CAD40007.3| OSJNBb0052B05.10 [Oryza sativa Japonica Group] 75 3e-13
gb|ABF96299.1| retrotransposon protein, putative, Ty3-gypsy subc... 75 3e-13
>gb|EOX93994.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 811
Score = 87.0 bits (214), Expect(2) = 1e-16
Identities = 38/59 (64%), Positives = 46/59 (77%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
K+++WW GMKR+I K+V CLT Q++KAEHQKS G L LPIPE KW HVT DFV+ LP
Sbjct: 524 KESYWWPGMKRDIAKFVAKCLTCQQIKAEHQKSSGTLQPLPIPEWKWEHVTMDFVLGLP 582
Score = 24.6 bits (52), Expect(2) = 1e-16
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++ +D I VIV+RLT AHF
Sbjct: 577 FVLGLPRTQSGKDAIWVIVDRLTKSAHF 604
>emb|CAN68955.1| hypothetical protein VITISV_014191 [Vitis vinifera]
Length = 480
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLPD 63
K+ FWW+GMKR+IV+YV C T Q+VK EHQ+ VGLL LPIPE KW H+T DFVIRLP
Sbjct: 151 KRXFWWSGMKRDIVQYVANCQTCQQVKTEHQRPVGLLQPLPIPEWKWDHITMDFVIRLPR 210
Query: 62 PRDMR 48
R +
Sbjct: 211 TRSKK 215
>gb|EOX94092.1| Gag protease polyprotein [Theobroma cacao]
Length = 269
Score = 84.7 bits (208), Expect(2) = 2e-16
Identities = 35/59 (59%), Positives = 45/59 (76%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
K+N+WW GMKR++ ++V CL Q+VKAEHQ+ G L SLP+PE KW HVT DFV+ LP
Sbjct: 23 KENYWWPGMKRDVAEFVAKCLVCQQVKAEHQRPAGTLQSLPVPEWKWEHVTMDFVLGLP 81
Score = 26.6 bits (57), Expect(2) = 2e-16
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++R D I VIV+RLT AHF
Sbjct: 76 FVLGLPRTQRGNDAIWVIVDRLTKSAHF 103
>gb|EOY32328.1| Uncharacterized protein TCM_040115 [Theobroma cacao]
Length = 363
Score = 83.6 bits (205), Expect(2) = 3e-16
Identities = 34/59 (57%), Positives = 45/59 (76%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
++N+WW GMKR++ ++V CL Q+VKAEHQ+ G L SLP+PE KW HVT DFV+ LP
Sbjct: 237 RENYWWPGMKRDVAEFVAKCLVCQQVKAEHQRPAGTLQSLPVPEWKWEHVTMDFVLGLP 295
Score = 26.9 bits (58), Expect(2) = 3e-16
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++R +D I VIV+RLT AHF
Sbjct: 290 FVLGLPRTQRGKDAIWVIVDRLTKSAHF 317
>gb|EOX94089.1| Uncharacterized protein TCM_003206 [Theobroma cacao]
Length = 694
Score = 82.4 bits (202), Expect(2) = 5e-16
Identities = 33/59 (55%), Positives = 45/59 (76%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
++N+WW GMKR++ ++V C+ Q+VKAEHQ+ G L SLP+PE KW HVT DFV+ LP
Sbjct: 533 RENYWWPGMKRDVAEFVAKCVVCQQVKAEHQRPAGTLQSLPVPEWKWEHVTMDFVLGLP 591
Score = 27.3 bits (59), Expect(2) = 5e-16
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++R +D I VIV+RLT AHF
Sbjct: 586 FVLGLPRTQRGKDAIWVIVDRLTKFAHF 613
>gb|EOY00082.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1515
Score = 81.3 bits (199), Expect(2) = 1e-15
Identities = 32/59 (54%), Positives = 45/59 (76%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
++N+WW GMKR++ +++ CL Q+VKAEHQ+ V L SLP+PE KW HVT DF++ LP
Sbjct: 1110 RENYWWPGMKRDVAEFIAKCLVCQQVKAEHQRLVDTLQSLPVPEWKWEHVTMDFILGLP 1168
Score = 26.9 bits (58), Expect(2) = 1e-15
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++R +D I VIV+RLT AHF
Sbjct: 1163 FILGLPRTQRGKDAIWVIVDRLTKSAHF 1190
>gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1290
Score = 83.2 bits (204), Expect(2) = 5e-15
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
K+++WW GMKR+I ++V CL Q++KAEHQKS G L LPIPE KW HVT DFV+ LP
Sbjct: 912 KESYWWPGMKRDIAEFVAKCLICQQIKAEHQKSSGTLQPLPIPEWKWEHVTMDFVLGLP 970
Score = 23.1 bits (48), Expect(2) = 5e-15
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++ +D I VI+ RLT AHF
Sbjct: 965 FVLGLPRTQSGKDAIWVIMGRLTKSAHF 992
>gb|EOY08653.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1110
Score = 80.5 bits (197), Expect(2) = 1e-14
Identities = 35/58 (60%), Positives = 44/58 (75%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRL 69
K+++WW GMKR+I ++V CLT Q++KAEHQK G L LPIPE KW HVT DFV+ L
Sbjct: 818 KESYWWPGMKRDIAEFVAKCLTCQQIKAEHQKLSGTLQPLPIPEWKWEHVTMDFVLGL 875
Score = 24.6 bits (52), Expect(2) = 1e-14
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++ +D I VIV+RLT AHF
Sbjct: 871 FVLGLLRTQSGKDAIWVIVDRLTKSAHF 898
>gb|AAQ56285.1| putative gag-pol protein [Oryza sativa Japonica Group]
Length = 552
Score = 77.8 bits (190), Expect(2) = 1e-14
Identities = 36/59 (61%), Positives = 42/59 (71%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
KQ+FWW MK +I KYV AC Q+VKAEH++ GLL L IPE KW H+T DFVI LP
Sbjct: 150 KQSFWWKRMKVDIAKYVSACGVCQQVKAEHKRPAGLLWPLEIPEWKWEHITMDFVIGLP 208
Score = 26.9 bits (58), Expect(2) = 1e-14
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + RS R +D I V+V+RLT AHF
Sbjct: 203 FVIGLPRSPRGKDAIWVVVDRLTKSAHF 230
>emb|CAN69016.1| hypothetical protein VITISV_016361 [Vitis vinifera]
Length = 1043
Score = 80.9 bits (198), Expect(2) = 2e-14
Identities = 37/59 (62%), Positives = 43/59 (72%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
K+ +WW GMKR+I ++V CLT Q+VK EHQK VGLL LPI E KW HVT DFV LP
Sbjct: 655 KRQYWWQGMKRDISQFVSKCLTCQQVKVEHQKPVGLLQPLPIAEWKWDHVTMDFVTGLP 713
Score = 23.5 bits (49), Expect(2) = 2e-14
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + ++ + +D + VIV+RLT +AHF
Sbjct: 708 FVTGLPKTPQSKDSVWVIVDRLTKLAHF 735
>gb|EOY14138.1| Uncharacterized protein TCM_033423 [Theobroma cacao]
Length = 809
Score = 79.7 bits (195), Expect(2) = 2e-14
Identities = 35/59 (59%), Positives = 44/59 (74%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
K+++WW GMKR+I ++V CLT Q++KAEHQK G L L IPE KW HVT DFV+ LP
Sbjct: 628 KESYWWPGMKRDIAEFVAKCLTCQQIKAEHQKPSGTLQPLLIPEWKWEHVTMDFVLGLP 686
Score = 24.6 bits (52), Expect(2) = 2e-14
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++ +D I VIV+RLT AHF
Sbjct: 681 FVLGLPRTQSGKDAIWVIVDRLTKSAHF 708
>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1537
Score = 79.0 bits (193), Expect(2) = 3e-14
Identities = 34/59 (57%), Positives = 44/59 (74%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
K+++WW GM+R+I ++V CLT Q++KAEHQK G L L IPE KW HVT DFV+ LP
Sbjct: 1123 KESYWWPGMERDIAEFVAKCLTCQQIKAEHQKPSGTLQPLSIPEWKWEHVTMDFVLGLP 1181
Score = 24.6 bits (52), Expect(2) = 3e-14
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++ +D I VIV+RLT AHF
Sbjct: 1176 FVLGLPRTQSGKDAIWVIVDRLTKSAHF 1203
>ref|XP_002268718.2| PREDICTED: HIPL1 protein-like [Vitis vinifera]
Length = 937
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/59 (61%), Positives = 45/59 (76%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
+QN+WW+GMKR+I ++V CL Q+VKAEHQ+ VG L L IPE KW H+T DFVI LP
Sbjct: 152 RQNYWWSGMKRDIAQFVARCLVCQQVKAEHQQPVGSLQPLAIPEWKWEHITMDFVIGLP 210
>gb|EOY21236.1| Uncharacterized protein TCM_012637 [Theobroma cacao]
Length = 634
Score = 78.2 bits (191), Expect(2) = 7e-14
Identities = 33/58 (56%), Positives = 44/58 (75%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRL 69
K+++WW+G+KR+I ++V CLT Q++KAEHQK L LPIPE KW HVT DFV+ L
Sbjct: 401 KESYWWSGIKRDIAEFVAKCLTCQQIKAEHQKPSSTLQPLPIPEWKWEHVTMDFVLGL 458
Score = 24.3 bits (51), Expect(2) = 7e-14
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F ++R++ +D I VIV RLT AHF
Sbjct: 454 FVLGLSRTQSGKDAIWVIVYRLTKSAHF 481
>gb|AAX95143.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|77549637|gb|ABA92434.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1847
Score = 76.6 bits (187), Expect(2) = 1e-13
Identities = 35/59 (59%), Positives = 40/59 (67%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
K+ FWW MKREI +YV C+ QRVKAEHQK VGLL L IPE KW + DF+ LP
Sbjct: 1505 KERFWWASMKREIAEYVAVCVVCQRVKAEHQKPVGLLQPLKIPEWKWEELGMDFITGLP 1563
Score = 25.0 bits (53), Expect(2) = 1e-13
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R+ D I VIV+RLT VAHF
Sbjct: 1558 FITGLPRTSSGHDSIWVIVDRLTKVAHF 1585
>gb|AAD22153.1|AF061282_6 polyprotein [Sorghum bicolor]
Length = 1484
Score = 73.9 bits (180), Expect(2) = 2e-13
Identities = 31/59 (52%), Positives = 41/59 (69%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
+Q +WW G+KR++ +YV C T QRVKAEHQ+ GLL + IPE KW V DF++ LP
Sbjct: 1088 RQKYWWYGLKRDVAEYVALCDTCQRVKAEHQRPAGLLQPMKIPEWKWEEVGMDFIVGLP 1146
Score = 27.3 bits (59), Expect(2) = 2e-13
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R++R D I VIV+RLT VAHF
Sbjct: 1141 FIVGLPRTQRGYDSIWVIVDRLTKVAHF 1168
>gb|EMJ22433.1| hypothetical protein PRUPE_ppb019121mg [Prunus persica]
Length = 552
Score = 73.9 bits (180), Expect(2) = 2e-13
Identities = 33/59 (55%), Positives = 42/59 (71%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
++++WW MK+EI +YV CL Q+VKAE QK GLL LPIPE KW +T DFV +LP
Sbjct: 156 REHYWWPFMKKEIAEYVRRCLICQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLP 214
Score = 27.3 bits (59), Expect(2) = 2e-13
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F +K+ R++ D + VIV+RLT AHF
Sbjct: 209 FVFKLPRTQSKHDGVWVIVDRLTKSAHF 236
>emb|CAN69982.1| hypothetical protein VITISV_027150 [Vitis vinifera]
Length = 1495
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/65 (55%), Positives = 46/65 (70%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLPD 63
K+ FWW+GMKR+I ++V C Q+VKAEHQ+ GLL LPIPE KW ++T DFVI LP
Sbjct: 1125 KRQFWWSGMKRDIAQFVXNCQICQQVKAEHQRPAGLLQPLPIPEWKWDNITMDFVIGLPR 1184
Query: 62 PRDMR 48
R +
Sbjct: 1185 TRSKK 1189
>emb|CAD40007.3| OSJNBb0052B05.10 [Oryza sativa Japonica Group]
Length = 1963
Score = 75.5 bits (184), Expect(2) = 3e-13
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
K+ FWW MKREI +YV+ C QRVKAEHQK GLL L IPE KW + DF+ LP
Sbjct: 1556 KERFWWASMKREIAEYVVVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLP 1614
Score = 25.0 bits (53), Expect(2) = 3e-13
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R+ D I VIV+RLT VAHF
Sbjct: 1609 FITGLPRTSSGHDSIWVIVDRLTKVAHF 1636
>gb|ABF96299.1| retrotransposon protein, putative, Ty3-gypsy subclass, expressed
[Oryza sativa Japonica Group]
Length = 1822
Score = 75.5 bits (184), Expect(2) = 3e-13
Identities = 35/59 (59%), Positives = 39/59 (66%)
Frame = -1
Query: 242 KQNFWWNGMKREIVKYVIACLTSQRVKAEHQKSVGLL*SLPIPE*KWHHVTKDFVIRLP 66
K+ FWW MKREIV+YV C QRVKAEHQK GLL L IPE KW + DF+ LP
Sbjct: 1415 KERFWWASMKREIVEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLP 1473
Score = 25.0 bits (53), Expect(2) = 3e-13
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -3
Query: 84 FCYKITRSKRYEDVI*VIVNRLT*VAHF 1
F + R+ D I VIV+RLT VAHF
Sbjct: 1468 FITGLPRTSSGHDSIWVIVDRLTKVAHF 1495